EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000018650 (Gene tree)
Gene ID: 553807
Gene Symbol: gtpbp3
Alias: zgc:112394
Full Name: GTP binding protein 3%2C mitochondrial
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 27776 bases
Position: chr11:6009984-6037759
Accession: ZDB-GENE-050522-335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000155544	MMR_HSR1	PF01926.23	4.2e-21	1	1
ENSDARP00000138822	MMR_HSR1	PF01926.23	4.5e-21	1	1
ENSDARP00000150831	MMR_HSR1	PF01926.23	4.8e-21	1	1
ENSDARP00000004190	MMR_HSR1	PF01926.23	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000188999	-	1344	-	ENSDARP00000155544	447 (aa)	-	A0A077D3Q6
ENSDART00000161001	-	818	-	ENSDARP00000136836	239 (aa)	-	A0A0R4IP96
ENSDART00000166488	-	437	-	-	- (aa)	-	-
ENSDART00000022526	-	1664	-	ENSDARP00000004190	500 (aa)	-	F1Q694
ENSDART00000170047	-	1557	-	ENSDARP00000138822	471 (aa)	-	A0A077CZD0
ENSDART00000185680	-	1889	-	ENSDARP00000150831	489 (aa)	-	A0A2R8QCU4

Gene Model

Click here to download ENSDARG00000018650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000018650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000018650	gtpbp3	99	56.879	ENSG00000130299	GTPBP3	97	57.084	Homo_sapiens
ENSDARG00000018650	gtpbp3	64	55.776	ENSAPOG00000015815	-	95	55.776	Acanthochromis_polyacanthus
ENSDARG00000018650	gtpbp3	97	70.124	ENSAPOG00000012575	gtpbp3	94	70.124	Acanthochromis_polyacanthus
ENSDARG00000018650	gtpbp3	95	54.947	ENSAMEG00000010489	GTPBP3	93	55.789	Ailuropoda_melanoleuca
ENSDARG00000018650	gtpbp3	97	64.421	ENSACIG00000012338	gtpbp3	96	64.421	Amphilophus_citrinellus
ENSDARG00000018650	gtpbp3	88	67.990	ENSAOCG00000008891	gtpbp3	89	66.746	Amphiprion_ocellaris
ENSDARG00000018650	gtpbp3	97	69.602	ENSAPEG00000007438	gtpbp3	93	69.602	Amphiprion_percula
ENSDARG00000018650	gtpbp3	99	68.410	ENSATEG00000017428	gtpbp3	98	67.589	Anabas_testudineus
ENSDARG00000018650	gtpbp3	98	56.790	ENSANAG00000030487	GTPBP3	99	57.506	Aotus_nancymaae
ENSDARG00000018650	gtpbp3	97	69.547	ENSACLG00000012124	gtpbp3	98	67.928	Astatotilapia_calliptera
ENSDARG00000018650	gtpbp3	100	70.168	ENSAMXG00000019041	gtpbp3	100	70.168	Astyanax_mexicanus
ENSDARG00000018650	gtpbp3	95	58.085	ENSBTAG00000004200	GTPBP3	80	58.085	Bos_taurus
ENSDARG00000018650	gtpbp3	95	32.836	WBGene00009557	mtcu-1	99	32.836	Caenorhabditis_elegans
ENSDARG00000018650	gtpbp3	99	56.907	ENSCJAG00000009731	GTPBP3	97	57.084	Callithrix_jacchus
ENSDARG00000018650	gtpbp3	79	54.133	ENSCAFG00000015378	GTPBP3	91	55.200	Canis_familiaris
ENSDARG00000018650	gtpbp3	80	55.471	ENSCAFG00020010423	GTPBP3	86	56.489	Canis_lupus_dingo
ENSDARG00000018650	gtpbp3	95	58.085	ENSCHIG00000021205	GTPBP3	95	58.085	Capra_hircus
ENSDARG00000018650	gtpbp3	76	53.056	ENSCAPG00000016788	GTPBP3	100	53.056	Cavia_aperea
ENSDARG00000018650	gtpbp3	97	56.639	ENSCPOG00000027093	GTPBP3	97	56.639	Cavia_porcellus
ENSDARG00000018650	gtpbp3	99	57.290	ENSCCAG00000020717	GTPBP3	97	57.495	Cebus_capucinus
ENSDARG00000018650	gtpbp3	99	57.084	ENSCATG00000030444	GTPBP3	97	57.084	Cercocebus_atys
ENSDARG00000018650	gtpbp3	87	71.812	ENSCHOG00000002671	GTPBP3	88	71.812	Choloepus_hoffmanni
ENSDARG00000018650	gtpbp3	98	58.788	ENSCPBG00000012434	GTPBP3	97	58.498	Chrysemys_picta_bellii
ENSDARG00000018650	gtpbp3	99	56.674	ENSCANG00000028746	GTPBP3	97	56.674	Colobus_angolensis_palliatus
ENSDARG00000018650	gtpbp3	96	55.975	ENSCGRG00001000390	Gtpbp3	90	58.526	Cricetulus_griseus_chok1gshd
ENSDARG00000018650	gtpbp3	80	52.480	ENSCGRG00000005854	Gtpbp3	92	56.477	Cricetulus_griseus_crigri
ENSDARG00000018650	gtpbp3	95	57.339	ENSCSEG00000016590	gtpbp3	93	66.578	Cynoglossus_semilaevis
ENSDARG00000018650	gtpbp3	97	67.715	ENSCVAG00000021988	gtpbp3	92	67.715	Cyprinodon_variegatus
ENSDARG00000018650	gtpbp3	95	55.650	ENSDNOG00000042002	GTPBP3	93	56.503	Dasypus_novemcinctus
ENSDARG00000018650	gtpbp3	99	48.606	FBgn0039189	CG18528	99	48.606	Drosophila_melanogaster
ENSDARG00000018650	gtpbp3	95	54.618	ENSETEG00000006991	GTPBP3	93	55.000	Echinops_telfairi
ENSDARG00000018650	gtpbp3	95	50.094	ENSEBUG00000007810	gtpbp3	88	50.471	Eptatretus_burgeri
ENSDARG00000018650	gtpbp3	95	57.783	ENSEASG00005002907	GTPBP3	93	57.783	Equus_asinus_asinus
ENSDARG00000018650	gtpbp3	95	57.082	ENSECAG00000018651	GTPBP3	93	57.082	Equus_caballus
ENSDARG00000018650	gtpbp3	95	70.146	ENSELUG00000019607	gtpbp3	99	66.990	Esox_lucius
ENSDARG00000018650	gtpbp3	95	56.930	ENSFCAG00000001008	GTPBP3	93	57.783	Felis_catus
ENSDARG00000018650	gtpbp3	97	68.973	ENSFHEG00000022235	gtpbp3	93	69.102	Fundulus_heteroclitus
ENSDARG00000018650	gtpbp3	75	74.769	ENSGMOG00000013665	gtpbp3	84	74.769	Gadus_morhua
ENSDARG00000018650	gtpbp3	87	59.434	ENSGALG00000037256	GTPBP3	99	59.434	Gallus_gallus
ENSDARG00000018650	gtpbp3	97	68.201	ENSGAFG00000007045	gtpbp3	97	68.201	Gambusia_affinis
ENSDARG00000018650	gtpbp3	95	68.987	ENSGACG00000007790	gtpbp3	100	68.987	Gasterosteus_aculeatus
ENSDARG00000018650	gtpbp3	98	61.077	ENSGAGG00000009639	GTPBP3	97	60.729	Gopherus_agassizii
ENSDARG00000018650	gtpbp3	99	56.674	ENSGGOG00000015580	GTPBP3	97	56.879	Gorilla_gorilla
ENSDARG00000018650	gtpbp3	97	69.792	ENSHBUG00000004647	gtpbp3	97	69.792	Haplochromis_burtoni
ENSDARG00000018650	gtpbp3	97	54.583	ENSHGLG00000002806	GTPBP3	97	55.809	Heterocephalus_glaber_female
ENSDARG00000018650	gtpbp3	65	43.934	ENSHGLG00100015205	-	80	45.574	Heterocephalus_glaber_male
ENSDARG00000018650	gtpbp3	100	61.765	ENSHCOG00000007532	gtpbp3	100	61.961	Hippocampus_comes
ENSDARG00000018650	gtpbp3	99	73.320	ENSIPUG00000007198	gtpbp3	95	73.320	Ictalurus_punctatus
ENSDARG00000018650	gtpbp3	95	58.761	ENSSTOG00000006318	GTPBP3	93	58.761	Ictidomys_tridecemlineatus
ENSDARG00000018650	gtpbp3	96	70.042	ENSKMAG00000003914	gtpbp3	99	70.042	Kryptolebias_marmoratus
ENSDARG00000018650	gtpbp3	97	68.842	ENSLBEG00000027113	gtpbp3	95	68.842	Labrus_bergylta
ENSDARG00000018650	gtpbp3	99	61.336	ENSLACG00000005677	GTPBP3	97	61.336	Latimeria_chalumnae
ENSDARG00000018650	gtpbp3	100	60.707	ENSLOCG00000003052	gtpbp3	100	60.707	Lepisosteus_oculatus
ENSDARG00000018650	gtpbp3	95	59.275	ENSLAFG00000013978	GTPBP3	93	60.128	Loxodonta_africana
ENSDARG00000018650	gtpbp3	99	57.084	ENSMFAG00000004345	GTPBP3	97	57.084	Macaca_fascicularis
ENSDARG00000018650	gtpbp3	98	56.996	ENSMMUG00000023403	GTPBP3	97	54.617	Macaca_mulatta
ENSDARG00000018650	gtpbp3	99	57.084	ENSMNEG00000038380	GTPBP3	97	57.084	Macaca_nemestrina
ENSDARG00000018650	gtpbp3	99	57.084	ENSMLEG00000028812	GTPBP3	97	57.290	Mandrillus_leucophaeus
ENSDARG00000018650	gtpbp3	96	69.215	ENSMAMG00000007104	gtpbp3	92	69.215	Mastacembelus_armatus
ENSDARG00000018650	gtpbp3	100	66.733	ENSMZEG00005018819	gtpbp3	98	67.928	Maylandia_zebra
ENSDARG00000018650	gtpbp3	96	56.025	ENSMAUG00000018131	Gtpbp3	99	58.071	Mesocricetus_auratus
ENSDARG00000018650	gtpbp3	98	56.707	ENSMICG00000028047	GTPBP3	96	55.118	Microcebus_murinus
ENSDARG00000018650	gtpbp3	96	54.545	ENSMOCG00000015131	Gtpbp3	98	55.668	Microtus_ochrogaster
ENSDARG00000018650	gtpbp3	99	66.075	ENSMMOG00000007062	gtpbp3	95	66.075	Mola_mola
ENSDARG00000018650	gtpbp3	97	70.539	ENSMALG00000020955	gtpbp3	99	70.539	Monopterus_albus
ENSDARG00000018650	gtpbp3	95	55.556	MGP_CAROLIEiJ_G0031188	Gtpbp3	93	57.569	Mus_caroli
ENSDARG00000018650	gtpbp3	95	55.128	ENSMUSG00000007610	Gtpbp3	93	57.143	Mus_musculus
ENSDARG00000018650	gtpbp3	95	55.983	MGP_PahariEiJ_G0021653	Gtpbp3	93	57.356	Mus_pahari
ENSDARG00000018650	gtpbp3	95	56.716	MGP_SPRETEiJ_G0032307	Gtpbp3	93	57.143	Mus_spretus
ENSDARG00000018650	gtpbp3	95	57.537	ENSMPUG00000015889	GTPBP3	93	58.386	Mustela_putorius_furo
ENSDARG00000018650	gtpbp3	95	55.508	ENSMLUG00000010529	GTPBP3	93	55.508	Myotis_lucifugus
ENSDARG00000018650	gtpbp3	96	57.415	ENSNGAG00000017920	Gtpbp3	94	57.415	Nannospalax_galili
ENSDARG00000018650	gtpbp3	99	58.020	ENSNBRG00000021625	gtpbp3	96	58.020	Neolamprologus_brichardi
ENSDARG00000018650	gtpbp3	78	64.725	ENSNLEG00000005748	GTPBP3	91	64.725	Nomascus_leucogenys
ENSDARG00000018650	gtpbp3	88	55.276	ENSMEUG00000013022	GTPBP3	99	55.149	Notamacropus_eugenii
ENSDARG00000018650	gtpbp3	76	61.442	ENSOPRG00000005761	-	79	61.442	Ochotona_princeps
ENSDARG00000018650	gtpbp3	97	69.295	ENSONIG00000010114	gtpbp3	95	69.295	Oreochromis_niloticus
ENSDARG00000018650	gtpbp3	98	58.008	ENSOANG00000013734	GTPBP3	97	58.008	Ornithorhynchus_anatinus
ENSDARG00000018650	gtpbp3	97	67.086	ENSORLG00000008868	gtpbp3	93	67.086	Oryzias_latipes
ENSDARG00000018650	gtpbp3	97	67.086	ENSORLG00020013457	gtpbp3	93	67.086	Oryzias_latipes_hni
ENSDARG00000018650	gtpbp3	97	67.505	ENSORLG00015009095	gtpbp3	93	67.505	Oryzias_latipes_hsok
ENSDARG00000018650	gtpbp3	97	68.344	ENSOMEG00000004989	gtpbp3	93	68.344	Oryzias_melastigma
ENSDARG00000018650	gtpbp3	95	57.996	ENSOGAG00000007014	GTPBP3	93	57.996	Otolemur_garnettii
ENSDARG00000018650	gtpbp3	97	57.322	ENSOARG00000016953	GTPBP3	81	57.322	Ovis_aries
ENSDARG00000018650	gtpbp3	99	56.468	ENSPPAG00000027605	GTPBP3	97	56.674	Pan_paniscus
ENSDARG00000018650	gtpbp3	95	57.143	ENSPPRG00000010547	GTPBP3	93	57.996	Panthera_pardus
ENSDARG00000018650	gtpbp3	99	56.674	ENSPTRG00000010670	GTPBP3	97	56.879	Pan_troglodytes
ENSDARG00000018650	gtpbp3	98	57.202	ENSPANG00000017711	GTPBP3	97	54.813	Papio_anubis
ENSDARG00000018650	gtpbp3	98	67.490	ENSPKIG00000008711	gtpbp3	99	66.203	Paramormyrops_kingsleyae
ENSDARG00000018650	gtpbp3	98	64.969	ENSPMGG00000014730	gtpbp3	95	64.969	Periophthalmus_magnuspinnatus
ENSDARG00000018650	gtpbp3	96	56.723	ENSPEMG00000011836	Gtpbp3	98	56.137	Peromyscus_maniculatus_bairdii
ENSDARG00000018650	gtpbp3	97	58.436	ENSPCIG00000018394	GTPBP3	96	58.436	Phascolarctos_cinereus
ENSDARG00000018650	gtpbp3	97	68.685	ENSPFOG00000011268	gtpbp3	96	67.137	Poecilia_formosa
ENSDARG00000018650	gtpbp3	99	67.068	ENSPLAG00000006204	gtpbp3	99	67.068	Poecilia_latipinna
ENSDARG00000018650	gtpbp3	97	68.894	ENSPMEG00000015227	gtpbp3	92	68.894	Poecilia_mexicana
ENSDARG00000018650	gtpbp3	97	68.476	ENSPREG00000012552	gtpbp3	95	66.935	Poecilia_reticulata
ENSDARG00000018650	gtpbp3	99	55.556	ENSPPYG00000009711	GTPBP3	97	55.761	Pongo_abelii
ENSDARG00000018650	gtpbp3	95	57.113	ENSPCOG00000021581	GTPBP3	93	57.325	Propithecus_coquereli
ENSDARG00000018650	gtpbp3	95	52.918	ENSPVAG00000007877	GTPBP3	93	52.918	Pteropus_vampyrus
ENSDARG00000018650	gtpbp3	97	69.792	ENSPNYG00000014028	gtpbp3	98	67.729	Pundamilia_nyererei
ENSDARG00000018650	gtpbp3	95	75.106	ENSPNAG00000011434	gtpbp3	99	70.163	Pygocentrus_nattereri
ENSDARG00000018650	gtpbp3	96	57.294	ENSRNOG00000023403	Gtpbp3	94	57.717	Rattus_norvegicus
ENSDARG00000018650	gtpbp3	99	56.674	ENSRBIG00000039889	GTPBP3	97	56.674	Rhinopithecus_bieti
ENSDARG00000018650	gtpbp3	99	55.828	ENSRROG00000033731	GTPBP3	97	55.828	Rhinopithecus_roxellana
ENSDARG00000018650	gtpbp3	97	35.125	YMR023C	MSS1	98	35.125	Saccharomyces_cerevisiae
ENSDARG00000018650	gtpbp3	99	55.912	ENSSBOG00000003356	GTPBP3	96	56.112	Saimiri_boliviensis_boliviensis
ENSDARG00000018650	gtpbp3	100	66.667	ENSSFOG00015019813	gtpbp3	100	66.667	Scleropages_formosus
ENSDARG00000018650	gtpbp3	97	68.107	ENSSMAG00000020947	gtpbp3	94	68.107	Scophthalmus_maximus
ENSDARG00000018650	gtpbp3	99	68.288	ENSSDUG00000010662	gtpbp3	99	68.288	Seriola_dumerili
ENSDARG00000018650	gtpbp3	97	70.833	ENSSLDG00000002467	gtpbp3	99	68.639	Seriola_lalandi_dorsalis
ENSDARG00000018650	gtpbp3	64	61.842	ENSSARG00000003327	-	56	61.842	Sorex_araneus
ENSDARG00000018650	gtpbp3	89	60.697	ENSSPUG00000007326	GTPBP3	94	60.697	Sphenodon_punctatus
ENSDARG00000018650	gtpbp3	97	69.917	ENSSPAG00000003839	gtpbp3	93	69.917	Stegastes_partitus
ENSDARG00000018650	gtpbp3	96	59.197	ENSSSCG00000038440	GTPBP3	92	68.136	Sus_scrofa
ENSDARG00000018650	gtpbp3	100	65.175	ENSTRUG00000003828	gtpbp3	99	65.175	Takifugu_rubripes
ENSDARG00000018650	gtpbp3	97	66.461	ENSTNIG00000010179	gtpbp3	99	65.070	Tetraodon_nigroviridis
ENSDARG00000018650	gtpbp3	95	53.908	ENSTTRG00000003140	GTPBP3	93	53.908	Tursiops_truncatus
ENSDARG00000018650	gtpbp3	95	57.447	ENSVVUG00000016125	GTPBP3	95	58.298	Vulpes_vulpes
ENSDARG00000018650	gtpbp3	95	59.110	ENSXETG00000013066	gtpbp3	100	59.110	Xenopus_tropicalis
ENSDARG00000018650	gtpbp3	97	64.315	ENSXCOG00000008924	gtpbp3	97	64.315	Xiphophorus_couchianus
ENSDARG00000018650	gtpbp3	97	64.854	ENSXMAG00000002392	gtpbp3	97	64.854	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0002098	tRNA wobble uridine modification	21873635.	IBA	Process
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	27184967.	IDA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0006400	tRNA modification	-	IEA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0048568	embryonic organ development	21873635.	IBA	Process
GO:0048568	embryonic organ development	27184967.	IMP	Process