EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000018698 (Gene tree)
Gene ID: 445251
Gene Symbol: carm1
Alias: PRMT4|si:dkey-204f11.63|zgc:100805
Full Name: coactivator-associated arginine methyltransferase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22878 bases
Position: chr3:34149337-34172214
Accession: ZDB-GENE-040724-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000016959	MTS	PF05175.14	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000151562	-	827	-	ENSDARP00000126308	52 (aa)	-	I3ITN7
ENSDART00000151119	-	842	-	ENSDARP00000125959	260 (aa)	-	I3ISR8
ENSDART00000006091	-	3334	XM_005164016	ENSDARP00000016959	588 (aa)	XP_005164073	Q6DC04

Gene Model

Click here to download ENSDARG00000018698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000018698's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000018698	carm1	52	36.129	ENSDARG00000019791	prmt3	59	36.129
ENSDARG00000018698	carm1	53	33.437	ENSDARG00000063212	prmt2	77	33.437
ENSDARG00000018698	carm1	75	64.091	ENSDARG00000091531	carm1l	97	64.091
ENSDARG00000018698	carm1	56	33.731	ENSDARG00000069706	prmt6	92	33.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000018698	carm1	99	85.009	ENSG00000142453	CARM1	95	87.423	Homo_sapiens
ENSDARG00000018698	carm1	100	91.327	ENSAPOG00000017897	carm1	100	91.327	Acanthochromis_polyacanthus
ENSDARG00000018698	carm1	92	83.721	ENSAMEG00000011015	CARM1	100	84.436	Ailuropoda_melanoleuca
ENSDARG00000018698	carm1	100	91.156	ENSACIG00000013700	carm1	92	91.156	Amphilophus_citrinellus
ENSDARG00000018698	carm1	100	91.327	ENSAOCG00000024623	carm1	100	91.327	Amphiprion_ocellaris
ENSDARG00000018698	carm1	100	91.327	ENSAPEG00000021106	carm1	100	91.327	Amphiprion_percula
ENSDARG00000018698	carm1	100	90.986	ENSATEG00000008974	carm1	100	90.986	Anabas_testudineus
ENSDARG00000018698	carm1	92	86.667	ENSACAG00000015347	CARM1	100	86.852	Anolis_carolinensis
ENSDARG00000018698	carm1	98	85.345	ENSANAG00000027252	CARM1	93	87.454	Aotus_nancymaae
ENSDARG00000018698	carm1	100	90.646	ENSACLG00000004610	carm1	100	90.646	Astatotilapia_calliptera
ENSDARG00000018698	carm1	100	87.755	ENSAMXG00000018518	carm1	100	87.755	Astyanax_mexicanus
ENSDARG00000018698	carm1	99	84.838	ENSBTAG00000012048	CARM1	99	84.838	Bos_taurus
ENSDARG00000018698	carm1	99	85.204	ENSCJAG00000006228	CARM1	95	85.884	Callithrix_jacchus
ENSDARG00000018698	carm1	92	86.162	ENSCAFG00000017621	CARM1	99	86.900	Canis_familiaris
ENSDARG00000018698	carm1	99	82.594	ENSCAFG00020024515	-	96	82.594	Canis_lupus_dingo
ENSDARG00000018698	carm1	99	84.694	ENSCHIG00000008507	CARM1	96	85.544	Capra_hircus
ENSDARG00000018698	carm1	92	87.246	ENSTSYG00000001409	CARM1	100	83.704	Carlito_syrichta
ENSDARG00000018698	carm1	92	85.609	ENSCAPG00000009042	CARM1	97	86.531	Cavia_aperea
ENSDARG00000018698	carm1	96	83.039	ENSCPOG00000015465	CARM1	91	84.464	Cavia_porcellus
ENSDARG00000018698	carm1	99	85.179	ENSCCAG00000020727	CARM1	95	85.884	Cebus_capucinus
ENSDARG00000018698	carm1	99	85.034	ENSCATG00000034760	CARM1	99	82.283	Cercocebus_atys
ENSDARG00000018698	carm1	92	86.347	ENSCLAG00000011012	CARM1	100	87.085	Chinchilla_lanigera
ENSDARG00000018698	carm1	99	85.034	ENSCSAG00000006939	CARM1	95	85.714	Chlorocebus_sabaeus
ENSDARG00000018698	carm1	95	84.258	ENSCPBG00000010065	CARM1	100	87.335	Chrysemys_picta_bellii
ENSDARG00000018698	carm1	98	75.563	ENSCANG00000004191	CARM1	94	76.256	Colobus_angolensis_palliatus
ENSDARG00000018698	carm1	99	85.666	ENSCGRG00001023212	Carm1	95	85.666	Cricetulus_griseus_chok1gshd
ENSDARG00000018698	carm1	92	87.085	ENSCGRG00000008046	Carm1	99	87.085	Cricetulus_griseus_crigri
ENSDARG00000018698	carm1	100	85.059	ENSCSEG00000013769	carm1	99	90.893	Cynoglossus_semilaevis
ENSDARG00000018698	carm1	100	92.007	ENSCVAG00000010021	carm1	100	92.007	Cyprinodon_variegatus
ENSDARG00000018698	carm1	86	83.101	ENSDNOG00000018868	CARM1	100	88.326	Dasypus_novemcinctus
ENSDARG00000018698	carm1	92	84.473	ENSDORG00000013395	Carm1	91	84.473	Dipodomys_ordii
ENSDARG00000018698	carm1	80	77.500	ENSETEG00000005386	-	86	77.500	Echinops_telfairi
ENSDARG00000018698	carm1	100	72.203	ENSEBUG00000015598	carm1	99	69.821	Eptatretus_burgeri
ENSDARG00000018698	carm1	99	81.759	ENSEASG00005007536	CARM1	96	81.596	Equus_asinus_asinus
ENSDARG00000018698	carm1	99	84.694	ENSECAG00000013563	CARM1	96	85.374	Equus_caballus
ENSDARG00000018698	carm1	100	89.916	ENSELUG00000023839	carm1	100	90.756	Esox_lucius
ENSDARG00000018698	carm1	100	80.645	ENSELUG00000015993	-	100	80.645	Esox_lucius
ENSDARG00000018698	carm1	99	84.864	ENSFCAG00000004893	CARM1	96	85.544	Felis_catus
ENSDARG00000018698	carm1	92	87.593	ENSFDAG00000007838	CARM1	100	87.593	Fukomys_damarensis
ENSDARG00000018698	carm1	99	90.893	ENSFHEG00000001930	carm1	97	90.893	Fundulus_heteroclitus
ENSDARG00000018698	carm1	100	91.156	ENSGMOG00000009257	carm1	100	91.156	Gadus_morhua
ENSDARG00000018698	carm1	100	91.837	ENSGAFG00000006197	carm1	100	91.837	Gambusia_affinis
ENSDARG00000018698	carm1	100	90.986	ENSGACG00000005531	carm1	100	90.986	Gasterosteus_aculeatus
ENSDARG00000018698	carm1	92	86.506	ENSGAGG00000016821	CARM1	100	86.759	Gopherus_agassizii
ENSDARG00000018698	carm1	92	86.900	ENSGGOG00000000695	CARM1	93	87.638	Gorilla_gorilla
ENSDARG00000018698	carm1	100	90.646	ENSHBUG00000009307	carm1	100	90.646	Haplochromis_burtoni
ENSDARG00000018698	carm1	99	85.836	ENSHGLG00000007754	CARM1	96	85.836	Heterocephalus_glaber_female
ENSDARG00000018698	carm1	92	87.407	ENSHGLG00100016789	CARM1	100	87.407	Heterocephalus_glaber_male
ENSDARG00000018698	carm1	100	84.524	ENSHCOG00000007723	carm1	98	84.524	Hippocampus_comes
ENSDARG00000018698	carm1	100	94.218	ENSIPUG00000000942	carm1	100	94.218	Ictalurus_punctatus
ENSDARG00000018698	carm1	92	86.347	ENSSTOG00000007864	CARM1	100	83.704	Ictidomys_tridecemlineatus
ENSDARG00000018698	carm1	99	84.327	ENSJJAG00000008047	Carm1	98	85.179	Jaculus_jaculus
ENSDARG00000018698	carm1	100	91.497	ENSKMAG00000020575	carm1	100	91.497	Kryptolebias_marmoratus
ENSDARG00000018698	carm1	100	90.136	ENSLBEG00000010071	carm1	100	90.136	Labrus_bergylta
ENSDARG00000018698	carm1	92	79.574	ENSLACG00000015696	CARM1	99	79.751	Latimeria_chalumnae
ENSDARG00000018698	carm1	100	86.172	ENSLOCG00000006077	carm1	99	86.172	Lepisosteus_oculatus
ENSDARG00000018698	carm1	92	81.132	ENSLAFG00000004431	CARM1	100	81.132	Loxodonta_africana
ENSDARG00000018698	carm1	99	85.034	ENSMFAG00000036898	CARM1	98	85.714	Macaca_fascicularis
ENSDARG00000018698	carm1	99	85.034	ENSMMUG00000004401	CARM1	95	85.714	Macaca_mulatta
ENSDARG00000018698	carm1	99	85.034	ENSMNEG00000031496	CARM1	99	85.714	Macaca_nemestrina
ENSDARG00000018698	carm1	92	86.691	ENSMLEG00000006303	CARM1	100	87.431	Mandrillus_leucophaeus
ENSDARG00000018698	carm1	100	91.156	ENSMAMG00000002021	carm1	100	91.156	Mastacembelus_armatus
ENSDARG00000018698	carm1	100	90.646	ENSMZEG00005000446	carm1	100	90.646	Maylandia_zebra
ENSDARG00000018698	carm1	99	85.520	ENSMICG00000009787	CARM1	99	85.520	Microcebus_murinus
ENSDARG00000018698	carm1	99	84.014	ENSMOCG00000004215	Carm1	96	84.014	Microtus_ochrogaster
ENSDARG00000018698	carm1	100	89.966	ENSMMOG00000017018	carm1	100	89.966	Mola_mola
ENSDARG00000018698	carm1	92	82.230	ENSMODG00000006104	CARM1	99	82.056	Monodelphis_domestica
ENSDARG00000018698	carm1	100	90.646	ENSMALG00000002150	carm1	100	90.646	Monopterus_albus
ENSDARG00000018698	carm1	99	85.836	MGP_CAROLIEiJ_G0031876	Carm1	98	83.364	Mus_caroli
ENSDARG00000018698	carm1	99	85.836	ENSMUSG00000032185	Carm1	95	85.836	Mus_musculus
ENSDARG00000018698	carm1	99	85.836	MGP_PahariEiJ_G0014742	Carm1	95	85.836	Mus_pahari
ENSDARG00000018698	carm1	99	85.836	MGP_SPRETEiJ_G0033000	Carm1	95	85.836	Mus_spretus
ENSDARG00000018698	carm1	92	83.692	ENSMPUG00000005752	CARM1	100	84.409	Mustela_putorius_furo
ENSDARG00000018698	carm1	93	82.168	ENSMLUG00000011075	CARM1	100	82.343	Myotis_lucifugus
ENSDARG00000018698	carm1	99	85.666	ENSNGAG00000001362	Carm1	95	85.666	Nannospalax_galili
ENSDARG00000018698	carm1	97	84.912	ENSNLEG00000012371	CARM1	100	85.614	Nomascus_leucogenys
ENSDARG00000018698	carm1	95	85.000	ENSODEG00000015950	CARM1	100	87.407	Octodon_degus
ENSDARG00000018698	carm1	100	90.986	ENSONIG00000006259	carm1	98	90.986	Oreochromis_niloticus
ENSDARG00000018698	carm1	92	73.768	ENSOCUG00000003368	CARM1	100	74.296	Oryctolagus_cuniculus
ENSDARG00000018698	carm1	100	89.966	ENSORLG00000017315	carm1	100	89.966	Oryzias_latipes
ENSDARG00000018698	carm1	100	86.054	ENSORLG00020017371	carm1	100	86.054	Oryzias_latipes_hni
ENSDARG00000018698	carm1	100	89.796	ENSORLG00015009932	carm1	100	89.796	Oryzias_latipes_hsok
ENSDARG00000018698	carm1	58	91.545	ENSOMEG00000013937	carm1	100	91.545	Oryzias_melastigma
ENSDARG00000018698	carm1	93	81.475	ENSOGAG00000016835	CARM1	99	81.647	Otolemur_garnettii
ENSDARG00000018698	carm1	92	86.162	ENSOARG00000017317	CARM1	97	87.085	Ovis_aries
ENSDARG00000018698	carm1	95	84.397	ENSPPAG00000030586	CARM1	100	84.074	Pan_paniscus
ENSDARG00000018698	carm1	92	86.506	ENSPPRG00000007534	CARM1	88	87.246	Panthera_pardus
ENSDARG00000018698	carm1	77	85.430	ENSPTIG00000020631	CARM1	89	85.430	Panthera_tigris_altaica
ENSDARG00000018698	carm1	99	85.179	ENSPTRG00000010485	CARM1	95	85.860	Pan_troglodytes
ENSDARG00000018698	carm1	99	85.034	ENSPANG00000021071	CARM1	96	85.714	Papio_anubis
ENSDARG00000018698	carm1	100	87.946	ENSPKIG00000005227	carm1	100	87.946	Paramormyrops_kingsleyae
ENSDARG00000018698	carm1	100	86.003	ENSPKIG00000003610	-	98	87.614	Paramormyrops_kingsleyae
ENSDARG00000018698	carm1	100	90.816	ENSPMGG00000005086	carm1	96	90.816	Periophthalmus_magnuspinnatus
ENSDARG00000018698	carm1	96	83.951	ENSPEMG00000023286	Carm1	100	87.407	Peromyscus_maniculatus_bairdii
ENSDARG00000018698	carm1	95	68.528	ENSPMAG00000003740	carm1	98	67.550	Petromyzon_marinus
ENSDARG00000018698	carm1	99	85.836	ENSPCIG00000017124	CARM1	95	85.884	Phascolarctos_cinereus
ENSDARG00000018698	carm1	100	92.007	ENSPFOG00000019570	carm1	100	92.007	Poecilia_formosa
ENSDARG00000018698	carm1	100	91.837	ENSPLAG00000011942	carm1	100	91.837	Poecilia_latipinna
ENSDARG00000018698	carm1	100	91.497	ENSPMEG00000012879	carm1	100	91.497	Poecilia_mexicana
ENSDARG00000018698	carm1	100	91.681	ENSPREG00000007471	carm1	100	91.681	Poecilia_reticulata
ENSDARG00000018698	carm1	88	84.787	ENSPPYG00000009565	CARM1	95	84.787	Pongo_abelii
ENSDARG00000018698	carm1	92	87.246	ENSPCOG00000018916	CARM1	97	87.246	Propithecus_coquereli
ENSDARG00000018698	carm1	88	85.781	ENSPVAG00000012161	CARM1	84	86.713	Pteropus_vampyrus
ENSDARG00000018698	carm1	100	90.646	ENSPNYG00000022506	carm1	100	90.646	Pundamilia_nyererei
ENSDARG00000018698	carm1	100	93.027	ENSPNAG00000023691	carm1	100	93.027	Pygocentrus_nattereri
ENSDARG00000018698	carm1	99	85.836	ENSRNOG00000031129	Carm1	95	85.836	Rattus_norvegicus
ENSDARG00000018698	carm1	92	86.531	ENSRBIG00000029213	CARM1	92	87.269	Rhinopithecus_bieti
ENSDARG00000018698	carm1	92	86.372	ENSRROG00000033867	CARM1	100	83.704	Rhinopithecus_roxellana
ENSDARG00000018698	carm1	92	86.716	ENSSBOG00000031852	CARM1	99	87.454	Saimiri_boliviensis_boliviensis
ENSDARG00000018698	carm1	93	86.339	ENSSHAG00000005586	CARM1	100	86.521	Sarcophilus_harrisii
ENSDARG00000018698	carm1	100	88.314	ENSSFOG00015018537	-	100	88.314	Scleropages_formosus
ENSDARG00000018698	carm1	100	89.626	ENSSFOG00015010235	carm1	90	89.626	Scleropages_formosus
ENSDARG00000018698	carm1	100	90.646	ENSSMAG00000016701	carm1	99	90.646	Scophthalmus_maximus
ENSDARG00000018698	carm1	100	91.667	ENSSDUG00000023353	carm1	100	91.667	Seriola_dumerili
ENSDARG00000018698	carm1	100	91.327	ENSSLDG00000011328	carm1	100	91.327	Seriola_lalandi_dorsalis
ENSDARG00000018698	carm1	95	83.571	ENSSPUG00000004517	CARM1	99	83.750	Sphenodon_punctatus
ENSDARG00000018698	carm1	100	91.497	ENSSPAG00000008826	carm1	100	91.497	Stegastes_partitus
ENSDARG00000018698	carm1	99	84.694	ENSSSCG00000013633	CARM1	96	85.374	Sus_scrofa
ENSDARG00000018698	carm1	100	88.776	ENSTRUG00000012690	carm1	100	88.776	Takifugu_rubripes
ENSDARG00000018698	carm1	100	88.776	ENSTNIG00000014008	carm1	99	88.776	Tetraodon_nigroviridis
ENSDARG00000018698	carm1	99	78.571	ENSTTRG00000016644	CARM1	95	79.252	Tursiops_truncatus
ENSDARG00000018698	carm1	92	87.061	ENSUAMG00000005865	CARM1	96	87.061	Ursus_americanus
ENSDARG00000018698	carm1	93	79.927	ENSUMAG00000024981	CARM1	97	80.109	Ursus_maritimus
ENSDARG00000018698	carm1	99	81.494	ENSVVUG00000017717	CARM1	95	89.781	Vulpes_vulpes
ENSDARG00000018698	carm1	99	81.188	ENSXETG00000009357	carm1	99	81.188	Xenopus_tropicalis
ENSDARG00000018698	carm1	100	92.007	ENSXCOG00000010644	carm1	96	92.007	Xiphophorus_couchianus
ENSDARG00000018698	carm1	100	92.007	ENSXMAG00000002542	carm1	100	92.007	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003713	transcription coactivator activity	-	ISS	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	ISS	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0006479	protein methylation	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008469	histone-arginine N-methyltransferase activity	21873635.	IBA	Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	15475159.	ISS	Function
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0019919	peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	21873635.	IBA	Process
GO:0030374	nuclear receptor transcription coactivator activity	-	ISS	Function
GO:0032259	methylation	-	IEA	Process
GO:0033146	regulation of intracellular estrogen receptor signaling pathway	-	ISS	Process
GO:0034969	histone arginine methylation	21873635.	IBA	Process
GO:0035242	protein-arginine omega-N asymmetric methyltransferase activity	21873635.	IBA	Function
GO:0035242	protein-arginine omega-N asymmetric methyltransferase activity	-	ISS	Function
GO:0035642	histone methyltransferase activity (H3-R17 specific)	-	ISS	Function
GO:0044212	transcription regulatory region DNA binding	-	ISS	Function
GO:0045600	positive regulation of fat cell differentiation	-	ISS	Process
GO:0048742	regulation of skeletal muscle fiber development	22016767.	IMP	Process
GO:0070577	lysine-acetylated histone binding	-	ISS	Function