EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000018881 (Gene tree)
Gene ID
503736
Gene Symbol
apobec2a
Alias
apo2a|zgc:110762
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide-like 2a
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
10378 bases
Position
chr22:641342-651719
Accession
ZDB-GENE-050306-15
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000124325APOBEC_NPF08210.115.9e-4811
ENSDARP00000124325APOBEC_CPF05240.141e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000148692-1389-ENSDARP00000124325266 (aa)-F8W3Q7
Gene Model
Click here to download ENSDARG00000018881's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000018881's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000018881apobec2a6234.807ENSDARG00000015734aicda8634.807
ENSDARG00000018881apobec2a8460.944ENSDARG00000113992apobec2b10054.710
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000018881apobec2a7659.809ENSG00000124701APOBEC28661.658Homo_sapiens
ENSDARG00000018881apobec2a9453.214ENSAPOG00000019390apobec2b10052.708Acanthochromis_polyacanthus
ENSDARG00000018881apobec2a7950.442ENSAMEG00000004467APOBEC27556.915Ailuropoda_melanoleuca
ENSDARG00000018881apobec2a6570.286ENSACIG00000016370apobec2a6870.286Amphilophus_citrinellus
ENSDARG00000018881apobec2a9456.972ENSACIG00000002472APOBEC210057.312Amphilophus_citrinellus
ENSDARG00000018881apobec2a9452.857ENSAOCG00000023355apobec2b6964.894Amphiprion_ocellaris
ENSDARG00000018881apobec2a8963.900ENSAOCG00000003291apobec2a9863.900Amphiprion_ocellaris
ENSDARG00000018881apobec2a9452.857ENSAPEG00000004591apobec2b6964.894Amphiprion_percula
ENSDARG00000018881apobec2a8963.485ENSAPEG00000003630apobec2a9863.485Amphiprion_percula
ENSDARG00000018881apobec2a9458.175ENSATEG00000000956apobec2a9871.429Anabas_testudineus
ENSDARG00000018881apobec2a9453.237ENSATEG00000023043APOBEC210053.237Anabas_testudineus
ENSDARG00000018881apobec2a6857.447ENSAPLG00000002895APOBEC28357.447Anas_platyrhynchos
ENSDARG00000018881apobec2a7451.961ENSACAG00000016506APOBEC29556.425Anolis_carolinensis
ENSDARG00000018881apobec2a7659.809ENSANAG00000026993APOBEC28661.658Aotus_nancymaae
ENSDARG00000018881apobec2a9454.348ENSACLG00000007634APOBEC210052.174Astatotilapia_calliptera
ENSDARG00000018881apobec2a6566.092ENSACLG00000026736-9766.092Astatotilapia_calliptera
ENSDARG00000018881apobec2a8363.111ENSAMXG00000015966apobec2b8561.088Astyanax_mexicanus
ENSDARG00000018881apobec2a9260.938ENSAMXG00000042992apobec2a9963.780Astyanax_mexicanus
ENSDARG00000018881apobec2a7657.416ENSBTAG00000005974APOBEC26259.067Bos_taurus
ENSDARG00000018881apobec2a7659.809ENSCJAG00000004063APOBEC28661.658Callithrix_jacchus
ENSDARG00000018881apobec2a7657.895ENSCAFG00000001575APOBEC28659.585Canis_familiaris
ENSDARG00000018881apobec2a7658.373ENSCAFG00020008306APOBEC28660.104Canis_lupus_dingo
ENSDARG00000018881apobec2a7657.416ENSCHIG00000026348APOBEC28659.067Capra_hircus
ENSDARG00000018881apobec2a7658.852ENSTSYG00000008206APOBEC28560.622Carlito_syrichta
ENSDARG00000018881apobec2a7657.619ENSCAPG00000015084APOBEC28559.067Cavia_aperea
ENSDARG00000018881apobec2a7657.619ENSCPOG00000036103APOBEC28559.067Cavia_porcellus
ENSDARG00000018881apobec2a7659.809ENSCCAG00000033987APOBEC28661.658Cebus_capucinus
ENSDARG00000018881apobec2a7560.096ENSCATG00000010691APOBEC28661.658Cercocebus_atys
ENSDARG00000018881apobec2a7657.143ENSCLAG00000013817APOBEC28558.549Chinchilla_lanigera
ENSDARG00000018881apobec2a7659.809ENSCSAG00000011177APOBEC28661.658Chlorocebus_sabaeus
ENSDARG00000018881apobec2a6559.444ENSCHOG00000008930APOBEC210059.444Choloepus_hoffmanni
ENSDARG00000018881apobec2a6858.602ENSCPBG00000017469APOBEC28858.031Chrysemys_picta_bellii
ENSDARG00000018881apobec2a7659.809ENSCANG00000035072APOBEC28661.658Colobus_angolensis_palliatus
ENSDARG00000018881apobec2a7659.330ENSCGRG00001014983Apobec28661.140Cricetulus_griseus_chok1gshd
ENSDARG00000018881apobec2a7659.330ENSCGRG00000007835Apobec28661.140Cricetulus_griseus_crigri
ENSDARG00000018881apobec2a7060.106ENSCSEG00000000690-7060.106Cynoglossus_semilaevis
ENSDARG00000018881apobec2a8963.008ENSCSEG00000020201apobec2a9862.753Cynoglossus_semilaevis
ENSDARG00000018881apobec2a9454.286ENSCVAG00000012342apobec2b10052.727Cyprinodon_variegatus
ENSDARG00000018881apobec2a7039.394ENSDNOG00000033914APOBEC28638.835Dasypus_novemcinctus
ENSDARG00000018881apobec2a8456.170ENSDORG00000006447Apobec28461.658Dipodomys_ordii
ENSDARG00000018881apobec2a7060.104ENSETEG00000000624APOBEC28460.104Echinops_telfairi
ENSDARG00000018881apobec2a6558.757ENSEASG00005002937APOBEC28460.870Equus_asinus_asinus
ENSDARG00000018881apobec2a7658.373ENSECAG00000006576APOBEC28660.104Equus_caballus
ENSDARG00000018881apobec2a7654.067ENSEEUG00000006046APOBEC28656.477Erinaceus_europaeus
ENSDARG00000018881apobec2a9358.246ENSELUG00000003736apobec2a9958.246Esox_lucius
ENSDARG00000018881apobec2a7657.895ENSFCAG00000004108APOBEC28659.585Felis_catus
ENSDARG00000018881apobec2a6947.619ENSFALG00000003910APOBEC28347.619Ficedula_albicollis
ENSDARG00000018881apobec2a7657.075ENSFDAG00000006015APOBEC28659.585Fukomys_damarensis
ENSDARG00000018881apobec2a9458.167ENSFHEG00000005492apobec2b10057.371Fundulus_heteroclitus
ENSDARG00000018881apobec2a6572.414ENSGMOG00000007028apobec2a10072.414Gadus_morhua
ENSDARG00000018881apobec2a7556.039ENSGMOG00000006819apobec2b10050.195Gadus_morhua
ENSDARG00000018881apobec2a6959.259ENSGALG00000003226APOBEC28559.259Gallus_gallus
ENSDARG00000018881apobec2a9452.878ENSGAFG00000007634apobec2b8752.727Gambusia_affinis
ENSDARG00000018881apobec2a9456.031ENSGACG00000009663apobec2b10055.253Gasterosteus_aculeatus
ENSDARG00000018881apobec2a7071.809ENSGACG00000011671apobec2a10071.809Gasterosteus_aculeatus
ENSDARG00000018881apobec2a6858.602ENSGAGG00000010347APOBEC28758.031Gopherus_agassizii
ENSDARG00000018881apobec2a7659.809ENSGGOG00000001099APOBEC28461.658Gorilla_gorilla
ENSDARG00000018881apobec2a8860.924ENSHBUG00000015890apobec2a9660.924Haplochromis_burtoni
ENSDARG00000018881apobec2a9454.348ENSHBUG00000005993apobec2b10051.812Haplochromis_burtoni
ENSDARG00000018881apobec2a7256.931ENSHGLG00000017169APOBEC28558.031Heterocephalus_glaber_female
ENSDARG00000018881apobec2a7256.931ENSHGLG00100019442APOBEC28558.031Heterocephalus_glaber_male
ENSDARG00000018881apobec2a8859.836ENSHCOG00000020319apobec2a9960.246Hippocampus_comes
ENSDARG00000018881apobec2a9456.618ENSHCOG00000002712APOBEC210053.309Hippocampus_comes
ENSDARG00000018881apobec2a9459.206ENSIPUG00000013784Apobec210059.058Ictalurus_punctatus
ENSDARG00000018881apobec2a7970.093ENSIPUG00000017355apobec2a7163.529Ictalurus_punctatus
ENSDARG00000018881apobec2a7658.852ENSSTOG00000023643APOBEC28661.140Ictidomys_tridecemlineatus
ENSDARG00000018881apobec2a7657.895ENSJJAG00000009733Apobec28659.585Jaculus_jaculus
ENSDARG00000018881apobec2a9353.791ENSKMAG00000020631apobec2b9952.920Kryptolebias_marmoratus
ENSDARG00000018881apobec2a9460.956ENSLBEG00000025214apobec2a10058.964Labrus_bergylta
ENSDARG00000018881apobec2a7660.000ENSLBEG00000009422-6663.298Labrus_bergylta
ENSDARG00000018881apobec2a8354.425ENSLACG00000015985APOBEC29754.054Latimeria_chalumnae
ENSDARG00000018881apobec2a7565.842ENSLOCG00000012415apobec2b10055.914Lepisosteus_oculatus
ENSDARG00000018881apobec2a7660.287ENSLAFG00000016563APOBEC28662.176Loxodonta_africana
ENSDARG00000018881apobec2a7659.809ENSMFAG00000044645APOBEC28661.658Macaca_fascicularis
ENSDARG00000018881apobec2a7659.809ENSMMUG00000021171APOBEC28661.658Macaca_mulatta
ENSDARG00000018881apobec2a7659.809ENSMNEG00000045497APOBEC28661.658Macaca_nemestrina
ENSDARG00000018881apobec2a7659.809ENSMLEG00000028328APOBEC28661.658Mandrillus_leucophaeus
ENSDARG00000018881apobec2a9453.710ENSMAMG00000007926APOBEC210052.857Mastacembelus_armatus
ENSDARG00000018881apobec2a9063.821ENSMAMG00000023685apobec2a9663.265Mastacembelus_armatus
ENSDARG00000018881apobec2a9455.435ENSMZEG00005027159APOBEC210052.708Maylandia_zebra
ENSDARG00000018881apobec2a8362.332ENSMZEG00005005240-8870.000Maylandia_zebra
ENSDARG00000018881apobec2a6959.259ENSMGAG00000010173APOBEC29458.659Meleagris_gallopavo
ENSDARG00000018881apobec2a8456.897ENSMAUG00000011016Apobec28661.140Mesocricetus_auratus
ENSDARG00000018881apobec2a8056.502ENSMICG00000043339APOBEC28660.104Microcebus_murinus
ENSDARG00000018881apobec2a7658.373ENSMOCG00000001904Apobec28660.622Microtus_ochrogaster
ENSDARG00000018881apobec2a9453.506ENSMMOG00000008681apobec2b10053.137Mola_mola
ENSDARG00000018881apobec2a7655.238ENSMODG00000013090APOBEC28758.031Monodelphis_domestica
ENSDARG00000018881apobec2a8961.728ENSMALG00000020523apobec2a9862.140Monopterus_albus
ENSDARG00000018881apobec2a9455.894ENSMALG00000013779APOBEC210054.015Monopterus_albus
ENSDARG00000018881apobec2a7658.852MGP_CAROLIEiJ_G0021727Apobec28661.140Mus_caroli
ENSDARG00000018881apobec2a7659.330ENSMUSG00000040694Apobec28661.658Mus_musculus
ENSDARG00000018881apobec2a7658.852MGP_PahariEiJ_G0020716Apobec28661.140Mus_pahari
ENSDARG00000018881apobec2a7656.938ENSMPUG00000013691APOBEC28358.549Mustela_putorius_furo
ENSDARG00000018881apobec2a7655.981ENSMLUG00000011327APOBEC28457.513Myotis_lucifugus
ENSDARG00000018881apobec2a7658.852ENSNGAG00000013717Apobec28660.622Nannospalax_galili
ENSDARG00000018881apobec2a9453.986ENSNBRG00000018806apobec2b8954.348Neolamprologus_brichardi
ENSDARG00000018881apobec2a7070.588ENSNBRG00000021776apobec2a9659.664Neolamprologus_brichardi
ENSDARG00000018881apobec2a7659.809ENSNLEG00000005057APOBEC28661.658Nomascus_leucogenys
ENSDARG00000018881apobec2a7657.143ENSMEUG00000011623APOBEC28760.104Notamacropus_eugenii
ENSDARG00000018881apobec2a7657.547ENSOPRG00000014808APOBEC28560.622Ochotona_princeps
ENSDARG00000018881apobec2a7059.585ENSODEG00000016183APOBEC28459.585Octodon_degus
ENSDARG00000018881apobec2a9454.348ENSONIG00000012289apobec2b10052.536Oreochromis_niloticus
ENSDARG00000018881apobec2a8860.924ENSONIG00000004644-9660.924Oreochromis_niloticus
ENSDARG00000018881apobec2a6160.119ENSOANG00000000824APOBEC29858.333Ornithorhynchus_anatinus
ENSDARG00000018881apobec2a7658.019ENSOCUG00000028008APOBEC28561.140Oryctolagus_cuniculus
ENSDARG00000018881apobec2a9452.364ENSORLG00000022372APOBEC29853.030Oryzias_latipes
ENSDARG00000018881apobec2a9459.766ENSORLG00000010752apobec2a10059.363Oryzias_latipes
ENSDARG00000018881apobec2a9459.766ENSORLG00020004153apobec2a10059.363Oryzias_latipes_hni
ENSDARG00000018881apobec2a9452.727ENSORLG00020006164APOBEC29853.409Oryzias_latipes_hni
ENSDARG00000018881apobec2a9459.766ENSORLG00015021781apobec2a10059.363Oryzias_latipes_hsok
ENSDARG00000018881apobec2a9453.091ENSORLG00015022089-9853.030Oryzias_latipes_hsok
ENSDARG00000018881apobec2a9459.127ENSOMEG00000015449APOBEC210058.730Oryzias_melastigma
ENSDARG00000018881apobec2a9461.569ENSOMEG00000001311apobec2a10061.024Oryzias_melastigma
ENSDARG00000018881apobec2a8057.848ENSOGAG00000002632APOBEC28661.658Otolemur_garnettii
ENSDARG00000018881apobec2a7656.938ENSOARG00000000820APOBEC28658.549Ovis_aries
ENSDARG00000018881apobec2a7659.809ENSPPAG00000035598APOBEC28461.658Pan_paniscus
ENSDARG00000018881apobec2a7657.895ENSPPRG00000008530APOBEC28659.585Panthera_pardus
ENSDARG00000018881apobec2a7657.895ENSPTIG00000011084APOBEC28659.585Panthera_tigris_altaica
ENSDARG00000018881apobec2a7659.809ENSPTRG00000029679APOBEC28461.658Pan_troglodytes
ENSDARG00000018881apobec2a7659.809ENSPANG00000007121APOBEC28661.658Papio_anubis
ENSDARG00000018881apobec2a9362.162ENSPKIG00000004741apobec2b6874.074Paramormyrops_kingsleyae
ENSDARG00000018881apobec2a9459.524ENSPKIG00000005395apobec2a10059.761Paramormyrops_kingsleyae
ENSDARG00000018881apobec2a6858.602ENSPSIG00000013480APOBEC28258.824Pelodiscus_sinensis
ENSDARG00000018881apobec2a9550.714ENSPMGG00000002686APOBEC28149.286Periophthalmus_magnuspinnatus
ENSDARG00000018881apobec2a9568.605ENSPMGG00000004044apobec2a10067.816Periophthalmus_magnuspinnatus
ENSDARG00000018881apobec2a7658.852ENSPEMG00000005724Apobec28660.622Peromyscus_maniculatus_bairdii
ENSDARG00000018881apobec2a9453.597ENSPFOG00000001216apobec2b10053.818Poecilia_formosa
ENSDARG00000018881apobec2a9458.039ENSPLAG00000002074apobec2b10057.937Poecilia_latipinna
ENSDARG00000018881apobec2a9453.597ENSPMEG00000017537apobec2b10053.818Poecilia_mexicana
ENSDARG00000018881apobec2a9453.597ENSPREG00000020060apobec2b8752.555Poecilia_reticulata
ENSDARG00000018881apobec2a7658.852ENSPPYG00000016586APOBEC28660.622Pongo_abelii
ENSDARG00000018881apobec2a6960.733ENSPCAG00000011433APOBEC210060.733Procavia_capensis
ENSDARG00000018881apobec2a7659.330ENSPCOG00000026935APOBEC28661.140Propithecus_coquereli
ENSDARG00000018881apobec2a7656.938ENSPVAG00000008316APOBEC28658.549Pteropus_vampyrus
ENSDARG00000018881apobec2a9454.348ENSPNYG00000016747apobec2b10052.174Pundamilia_nyererei
ENSDARG00000018881apobec2a7766.197ENSPNAG00000013666apobec2b8661.411Pygocentrus_nattereri
ENSDARG00000018881apobec2a9265.134ENSPNAG00000010382apobec2a9963.602Pygocentrus_nattereri
ENSDARG00000018881apobec2a7658.852ENSRNOG00000012303Apobec28661.140Rattus_norvegicus
ENSDARG00000018881apobec2a7659.330ENSRBIG00000044756APOBEC28661.140Rhinopithecus_bieti
ENSDARG00000018881apobec2a7659.809ENSRROG00000030082APOBEC28661.658Rhinopithecus_roxellana
ENSDARG00000018881apobec2a7659.809ENSSBOG00000028496APOBEC28661.658Saimiri_boliviensis_boliviensis
ENSDARG00000018881apobec2a7655.714ENSSHAG00000017771APOBEC28758.549Sarcophilus_harrisii
ENSDARG00000018881apobec2a6358.480ENSSFOG00015005437-7158.480Scleropages_formosus
ENSDARG00000018881apobec2a8468.142ENSSFOG00015022920apobec26875.661Scleropages_formosus
ENSDARG00000018881apobec2a9459.608ENSSMAG00000001011apobec2a7459.375Scophthalmus_maximus
ENSDARG00000018881apobec2a7065.957ENSSMAG00000005110APOBEC26865.957Scophthalmus_maximus
ENSDARG00000018881apobec2a8361.261ENSSDUG00000014543apobec2b6965.957Seriola_dumerili
ENSDARG00000018881apobec2a9460.618ENSSDUG00000007013apobec2a10060.385Seriola_dumerili
ENSDARG00000018881apobec2a8361.261ENSSLDG00000003321apobec2b6965.957Seriola_lalandi_dorsalis
ENSDARG00000018881apobec2a9459.073ENSSLDG00000020199apobec2a10058.462Seriola_lalandi_dorsalis
ENSDARG00000018881apobec2a6554.696ENSSPUG00000010839APOBEC28754.696Sphenodon_punctatus
ENSDARG00000018881apobec2a9453.597ENSSPAG00000005253apobec2b10051.812Stegastes_partitus
ENSDARG00000018881apobec2a8961.224ENSSPAG00000016299-9861.411Stegastes_partitus
ENSDARG00000018881apobec2a7657.895ENSSSCG00000036018APOBEC28659.585Sus_scrofa
ENSDARG00000018881apobec2a6856.383ENSTGUG00000018533APOBEC28556.383Taeniopygia_guttata
ENSDARG00000018881apobec2a9451.282ENSTRUG00000012839apobec2b10050.758Takifugu_rubripes
ENSDARG00000018881apobec2a8960.400ENSTRUG00000009123apobec2a9860.905Takifugu_rubripes
ENSDARG00000018881apobec2a9452.941ENSTNIG00000015038apobec2b10052.030Tetraodon_nigroviridis
ENSDARG00000018881apobec2a7658.373ENSTBEG00000003553APOBEC28660.104Tupaia_belangeri
ENSDARG00000018881apobec2a8052.466ENSTTRG00000013392APOBEC28557.368Tursiops_truncatus
ENSDARG00000018881apobec2a7657.895ENSUAMG00000027667APOBEC28559.585Ursus_americanus
ENSDARG00000018881apobec2a7658.373ENSVVUG00000026617APOBEC28660.104Vulpes_vulpes
ENSDARG00000018881apobec2a8445.378ENSXETG00000008007apobec28649.010Xenopus_tropicalis
ENSDARG00000018881apobec2a9454.373ENSXCOG00000007398apobec2b10054.615Xiphophorus_couchianus
ENSDARG00000018881apobec2a9451.439ENSXMAG00000008134apobec2b10051.079Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001947heart looping20880495.IMPProcess
GO:0003723RNA binding21873635.IBAFunction
GO:0003824catalytic activity-IEAFunction
GO:0004126cytidine deaminase activity21873635.IBAFunction
GO:0005515protein binding25190811.IPIFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0016554cytidine to uridine editing21873635.IBAProcess
GO:0031099regeneration25190811.IGIProcess
GO:0043388positive regulation of DNA binding25190811.IDAProcess
GO:0043697cell dedifferentiation22262907.IMPProcess
GO:0060538skeletal muscle organ development20440001.IMPProcess
GO:0070654sensory epithelium regeneration22262907.IMPProcess
GO:0080111DNA demethylation21873635.IBAProcess

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