EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000018891 (Gene tree)
Gene ID: 393195
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2%2C subunit A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7765 bases
Position: chr1:51712869-51720633
Accession: ZDB-GENE-040426-976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000045893	RNase_HII	PF01351.18	8.7e-51	1	1
ENSDARP00000155352	RNase_HII	PF01351.18	8.7e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000150846	-	787	-	ENSDARP00000125360	71 (aa)	-	H0WET2
ENSDART00000190574	-	1089	-	ENSDARP00000155352	307 (aa)	-	Q6TNR0
ENSDART00000045894	-	1302	-	ENSDARP00000045893	307 (aa)	-	Q6TNR0

Gene Model

Click here to download ENSDARG00000018891's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000018891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000018891	rnaseh2a	99	64.286	ENSG00000104889	RNASEH2A	99	65.942	Homo_sapiens
ENSDARG00000018891	rnaseh2a	100	84.740	ENSAPOG00000004101	rnaseh2a	100	84.740	Acanthochromis_polyacanthus
ENSDARG00000018891	rnaseh2a	100	61.889	ENSAMEG00000012323	RNASEH2A	100	61.889	Ailuropoda_melanoleuca
ENSDARG00000018891	rnaseh2a	100	77.465	ENSACIG00000002658	rnaseh2a	100	87.451	Amphilophus_citrinellus
ENSDARG00000018891	rnaseh2a	100	83.226	ENSAOCG00000009217	rnaseh2a	100	83.226	Amphiprion_ocellaris
ENSDARG00000018891	rnaseh2a	100	83.226	ENSAPEG00000022937	rnaseh2a	100	83.226	Amphiprion_percula
ENSDARG00000018891	rnaseh2a	100	83.766	ENSATEG00000000908	rnaseh2a	100	83.766	Anabas_testudineus
ENSDARG00000018891	rnaseh2a	100	70.684	ENSACAG00000003338	RNASEH2A	100	70.684	Anolis_carolinensis
ENSDARG00000018891	rnaseh2a	100	45.253	ENSANAG00000037932	RNASEH2A	100	45.253	Aotus_nancymaae
ENSDARG00000018891	rnaseh2a	100	82.792	ENSACLG00000009169	rnaseh2a	100	82.792	Astatotilapia_calliptera
ENSDARG00000018891	rnaseh2a	100	77.850	ENSAMXG00000000436	rnaseh2a	100	77.850	Astyanax_mexicanus
ENSDARG00000018891	rnaseh2a	100	64.789	ENSBTAG00000009661	RNASEH2A	100	64.495	Bos_taurus
ENSDARG00000018891	rnaseh2a	91	47.703	WBGene00004383	rnh-2	93	47.703	Caenorhabditis_elegans
ENSDARG00000018891	rnaseh2a	100	61.972	ENSCJAG00000004873	RNASEH2A	100	61.238	Callithrix_jacchus
ENSDARG00000018891	rnaseh2a	100	62.215	ENSCAFG00000017159	RNASEH2A	100	62.215	Canis_familiaris
ENSDARG00000018891	rnaseh2a	100	62.215	ENSCAFG00020005190	RNASEH2A	60	62.215	Canis_lupus_dingo
ENSDARG00000018891	rnaseh2a	100	64.789	ENSCHIG00000014460	RNASEH2A	100	63.844	Capra_hircus
ENSDARG00000018891	rnaseh2a	100	63.518	ENSTSYG00000025418	RNASEH2A	100	63.518	Carlito_syrichta
ENSDARG00000018891	rnaseh2a	64	56.000	ENSCAPG00000003411	RNASEH2A	99	56.000	Cavia_aperea
ENSDARG00000018891	rnaseh2a	100	63.380	ENSCPOG00000038877	RNASEH2A	100	59.677	Cavia_porcellus
ENSDARG00000018891	rnaseh2a	100	64.789	ENSCCAG00000030453	RNASEH2A	100	61.889	Cebus_capucinus
ENSDARG00000018891	rnaseh2a	100	61.972	ENSCATG00000029609	RNASEH2A	100	61.564	Cercocebus_atys
ENSDARG00000018891	rnaseh2a	100	61.972	ENSCLAG00000014930	RNASEH2A	100	61.889	Chinchilla_lanigera
ENSDARG00000018891	rnaseh2a	100	61.972	ENSCSAG00000006567	RNASEH2A	100	61.564	Chlorocebus_sabaeus
ENSDARG00000018891	rnaseh2a	100	69.381	ENSCPBG00000023909	RNASEH2A	100	69.381	Chrysemys_picta_bellii
ENSDARG00000018891	rnaseh2a	100	52.443	ENSCING00000006190	-	100	52.443	Ciona_intestinalis
ENSDARG00000018891	rnaseh2a	100	51.792	ENSCSAVG00000010904	-	100	51.792	Ciona_savignyi
ENSDARG00000018891	rnaseh2a	100	63.380	ENSCANG00000027433	RNASEH2A	100	62.215	Colobus_angolensis_palliatus
ENSDARG00000018891	rnaseh2a	100	63.107	ENSCGRG00001005021	Rnaseh2a	100	63.107	Cricetulus_griseus_chok1gshd
ENSDARG00000018891	rnaseh2a	100	63.107	ENSCGRG00000016602	Rnaseh2a	93	70.196	Cricetulus_griseus_crigri
ENSDARG00000018891	rnaseh2a	100	88.732	ENSCSEG00000009842	rnaseh2a	100	84.039	Cynoglossus_semilaevis
ENSDARG00000018891	rnaseh2a	99	72.787	ENSCVAG00000021203	rnaseh2a	99	72.787	Cyprinodon_variegatus
ENSDARG00000018891	rnaseh2a	100	61.972	ENSDNOG00000036532	RNASEH2A	100	61.217	Dasypus_novemcinctus
ENSDARG00000018891	rnaseh2a	100	61.889	ENSDORG00000009008	Rnaseh2a	100	61.889	Dipodomys_ordii
ENSDARG00000018891	rnaseh2a	96	50.502	FBgn0031252	CG13690	85	50.502	Drosophila_melanogaster
ENSDARG00000018891	rnaseh2a	100	66.197	ENSETEG00000001956	-	100	59.155	Echinops_telfairi
ENSDARG00000018891	rnaseh2a	94	55.326	ENSEBUG00000003380	rnaseh2a	89	55.326	Eptatretus_burgeri
ENSDARG00000018891	rnaseh2a	100	60.563	ENSEASG00005004118	RNASEH2A	95	67.557	Equus_asinus_asinus
ENSDARG00000018891	rnaseh2a	100	61.889	ENSECAG00000007013	RNASEH2A	100	61.889	Equus_caballus
ENSDARG00000018891	rnaseh2a	100	64.789	ENSEEUG00000008222	RNASEH2A	100	59.935	Erinaceus_europaeus
ENSDARG00000018891	rnaseh2a	99	85.574	ENSELUG00000023079	rnaseh2a	96	82.996	Esox_lucius
ENSDARG00000018891	rnaseh2a	100	60.586	ENSFCAG00000000474	RNASEH2A	100	60.586	Felis_catus
ENSDARG00000018891	rnaseh2a	100	61.972	ENSFDAG00000003595	RNASEH2A	96	66.932	Fukomys_damarensis
ENSDARG00000018891	rnaseh2a	100	84.365	ENSFHEG00000007682	rnaseh2a	100	84.365	Fundulus_heteroclitus
ENSDARG00000018891	rnaseh2a	100	84.507	ENSGMOG00000005650	rnaseh2a	100	81.290	Gadus_morhua
ENSDARG00000018891	rnaseh2a	100	60.065	ENSGALG00000052002	RNASEH2A	73	60.065	Gallus_gallus
ENSDARG00000018891	rnaseh2a	100	82.736	ENSGAFG00000009624	rnaseh2a	100	82.736	Gambusia_affinis
ENSDARG00000018891	rnaseh2a	100	81.107	ENSGACG00000016019	rnaseh2a	100	81.107	Gasterosteus_aculeatus
ENSDARG00000018891	rnaseh2a	100	69.055	ENSGAGG00000013859	RNASEH2A	100	69.055	Gopherus_agassizii
ENSDARG00000018891	rnaseh2a	100	63.380	ENSGGOG00000005846	RNASEH2A	100	61.238	Gorilla_gorilla
ENSDARG00000018891	rnaseh2a	100	81.690	ENSHBUG00000005267	rnaseh2a	96	86.380	Haplochromis_burtoni
ENSDARG00000018891	rnaseh2a	100	61.972	ENSHGLG00000018801	RNASEH2A	100	59.609	Heterocephalus_glaber_female
ENSDARG00000018891	rnaseh2a	100	61.972	ENSHGLG00100015773	RNASEH2A	100	59.935	Heterocephalus_glaber_male
ENSDARG00000018891	rnaseh2a	100	82.410	ENSHCOG00000016593	rnaseh2a	100	82.410	Hippocampus_comes
ENSDARG00000018891	rnaseh2a	100	90.879	ENSIPUG00000024299	rnaseh2a	100	90.879	Ictalurus_punctatus
ENSDARG00000018891	rnaseh2a	100	60.645	ENSSTOG00000006224	RNASEH2A	99	67.843	Ictidomys_tridecemlineatus
ENSDARG00000018891	rnaseh2a	100	64.789	ENSJJAG00000017547	Rnaseh2a	100	62.987	Jaculus_jaculus
ENSDARG00000018891	rnaseh2a	100	81.759	ENSKMAG00000019829	rnaseh2a	100	81.759	Kryptolebias_marmoratus
ENSDARG00000018891	rnaseh2a	100	80.519	ENSLBEG00000020494	rnaseh2a	100	80.519	Labrus_bergylta
ENSDARG00000018891	rnaseh2a	100	74.648	ENSLACG00000007789	RNASEH2A	99	70.588	Latimeria_chalumnae
ENSDARG00000018891	rnaseh2a	100	79.153	ENSLOCG00000007890	rnaseh2a	99	79.153	Lepisosteus_oculatus
ENSDARG00000018891	rnaseh2a	100	63.380	ENSLAFG00000015571	RNASEH2A	100	62.215	Loxodonta_africana
ENSDARG00000018891	rnaseh2a	100	61.972	ENSMFAG00000002011	RNASEH2A	100	61.564	Macaca_fascicularis
ENSDARG00000018891	rnaseh2a	100	61.972	ENSMMUG00000005690	RNASEH2A	100	61.564	Macaca_mulatta
ENSDARG00000018891	rnaseh2a	100	61.972	ENSMNEG00000033054	RNASEH2A	100	61.564	Macaca_nemestrina
ENSDARG00000018891	rnaseh2a	100	61.972	ENSMLEG00000043654	RNASEH2A	100	61.564	Mandrillus_leucophaeus
ENSDARG00000018891	rnaseh2a	100	83.766	ENSMAMG00000003062	rnaseh2a	98	87.814	Mastacembelus_armatus
ENSDARG00000018891	rnaseh2a	100	82.143	ENSMZEG00005023857	rnaseh2a	100	82.143	Maylandia_zebra
ENSDARG00000018891	rnaseh2a	55	59.172	ENSMAUG00000021740	-	100	59.172	Mesocricetus_auratus
ENSDARG00000018891	rnaseh2a	100	60.563	ENSMAUG00000008286	-	100	65.217	Mesocricetus_auratus
ENSDARG00000018891	rnaseh2a	100	63.380	ENSMICG00000016430	RNASEH2A	100	61.564	Microcebus_murinus
ENSDARG00000018891	rnaseh2a	100	62.783	ENSMOCG00000017408	Rnaseh2a	100	62.783	Microtus_ochrogaster
ENSDARG00000018891	rnaseh2a	100	73.239	ENSMMOG00000008447	rnaseh2a	100	84.314	Mola_mola
ENSDARG00000018891	rnaseh2a	100	76.056	ENSMODG00000006997	RNASEH2A	100	70.418	Monodelphis_domestica
ENSDARG00000018891	rnaseh2a	100	84.091	ENSMALG00000021607	rnaseh2a	100	84.091	Monopterus_albus
ENSDARG00000018891	rnaseh2a	100	63.380	MGP_CAROLIEiJ_G0031319	-	100	66.667	Mus_caroli
ENSDARG00000018891	rnaseh2a	100	63.380	ENSMUSG00000052926	Rnaseh2a	99	69.412	Mus_musculus
ENSDARG00000018891	rnaseh2a	100	63.380	MGP_PahariEiJ_G0022924	Rnaseh2a	98	70.000	Mus_pahari
ENSDARG00000018891	rnaseh2a	100	63.380	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	66.667	Mus_spretus
ENSDARG00000018891	rnaseh2a	100	62.541	ENSMPUG00000004586	RNASEH2A	100	62.541	Mustela_putorius_furo
ENSDARG00000018891	rnaseh2a	100	62.215	ENSMLUG00000012723	RNASEH2A	100	62.215	Myotis_lucifugus
ENSDARG00000018891	rnaseh2a	100	61.972	ENSNGAG00000017988	Rnaseh2a	100	59.283	Nannospalax_galili
ENSDARG00000018891	rnaseh2a	100	83.117	ENSNBRG00000018731	rnaseh2a	100	83.117	Neolamprologus_brichardi
ENSDARG00000018891	rnaseh2a	100	63.380	ENSNLEG00000012806	RNASEH2A	100	61.564	Nomascus_leucogenys
ENSDARG00000018891	rnaseh2a	100	70.423	ENSMEUG00000006001	RNASEH2A	100	75.587	Notamacropus_eugenii
ENSDARG00000018891	rnaseh2a	100	51.792	ENSOPRG00000004811	RNASEH2A	100	51.792	Ochotona_princeps
ENSDARG00000018891	rnaseh2a	100	63.380	ENSODEG00000009772	RNASEH2A	100	60.586	Octodon_degus
ENSDARG00000018891	rnaseh2a	100	82.792	ENSONIG00000018033	rnaseh2a	99	82.792	Oreochromis_niloticus
ENSDARG00000018891	rnaseh2a	100	64.610	ENSOANG00000009079	RNASEH2A	100	64.610	Ornithorhynchus_anatinus
ENSDARG00000018891	rnaseh2a	100	82.410	ENSORLG00000004042	rnaseh2a	100	82.410	Oryzias_latipes
ENSDARG00000018891	rnaseh2a	100	82.410	ENSORLG00020009483	rnaseh2a	100	82.410	Oryzias_latipes_hni
ENSDARG00000018891	rnaseh2a	100	82.085	ENSORLG00015007548	rnaseh2a	100	82.085	Oryzias_latipes_hsok
ENSDARG00000018891	rnaseh2a	100	81.759	ENSOMEG00000016454	rnaseh2a	100	81.759	Oryzias_melastigma
ENSDARG00000018891	rnaseh2a	100	60.261	ENSOGAG00000012214	RNASEH2A	100	60.261	Otolemur_garnettii
ENSDARG00000018891	rnaseh2a	100	64.789	ENSOARG00000010721	RNASEH2A	100	63.844	Ovis_aries
ENSDARG00000018891	rnaseh2a	100	63.380	ENSPPAG00000028092	RNASEH2A	100	61.238	Pan_paniscus
ENSDARG00000018891	rnaseh2a	100	60.912	ENSPPRG00000010585	RNASEH2A	100	60.912	Panthera_pardus
ENSDARG00000018891	rnaseh2a	100	60.586	ENSPTIG00000013366	RNASEH2A	100	60.586	Panthera_tigris_altaica
ENSDARG00000018891	rnaseh2a	100	63.380	ENSPTRG00000010542	RNASEH2A	100	60.912	Pan_troglodytes
ENSDARG00000018891	rnaseh2a	100	61.972	ENSPANG00000034495	RNASEH2A	100	61.564	Papio_anubis
ENSDARG00000018891	rnaseh2a	100	84.039	ENSPKIG00000009756	rnaseh2a	100	84.039	Paramormyrops_kingsleyae
ENSDARG00000018891	rnaseh2a	66	71.782	ENSPSIG00000012039	RNASEH2A	100	71.782	Pelodiscus_sinensis
ENSDARG00000018891	rnaseh2a	100	76.056	ENSPMGG00000023392	rnaseh2a	100	83.137	Periophthalmus_magnuspinnatus
ENSDARG00000018891	rnaseh2a	100	63.754	ENSPEMG00000018009	Rnaseh2a	100	63.754	Peromyscus_maniculatus_bairdii
ENSDARG00000018891	rnaseh2a	100	63.380	ENSPMAG00000009060	rnaseh2a	98	65.359	Petromyzon_marinus
ENSDARG00000018891	rnaseh2a	100	74.648	ENSPCIG00000014119	RNASEH2A	100	71.383	Phascolarctos_cinereus
ENSDARG00000018891	rnaseh2a	100	82.410	ENSPFOG00000012627	rnaseh2a	100	79.355	Poecilia_formosa
ENSDARG00000018891	rnaseh2a	100	77.465	ENSPLAG00000015901	rnaseh2a	100	86.275	Poecilia_latipinna
ENSDARG00000018891	rnaseh2a	68	78.365	ENSPLAG00000018723	-	90	78.365	Poecilia_latipinna
ENSDARG00000018891	rnaseh2a	100	77.465	ENSPMEG00000000647	rnaseh2a	100	86.667	Poecilia_mexicana
ENSDARG00000018891	rnaseh2a	68	78.846	ENSPMEG00000009032	-	93	78.846	Poecilia_mexicana
ENSDARG00000018891	rnaseh2a	100	79.153	ENSPREG00000015015	rnaseh2a	100	79.153	Poecilia_reticulata
ENSDARG00000018891	rnaseh2a	100	63.380	ENSPPYG00000009608	RNASEH2A	100	60.714	Pongo_abelii
ENSDARG00000018891	rnaseh2a	100	61.889	ENSPCAG00000015319	RNASEH2A	100	61.889	Procavia_capensis
ENSDARG00000018891	rnaseh2a	100	61.972	ENSPCOG00000003686	RNASEH2A	100	60.912	Propithecus_coquereli
ENSDARG00000018891	rnaseh2a	100	63.380	ENSPVAG00000014703	RNASEH2A	100	48.860	Pteropus_vampyrus
ENSDARG00000018891	rnaseh2a	100	81.690	ENSPNYG00000023986	rnaseh2a	100	77.097	Pundamilia_nyererei
ENSDARG00000018891	rnaseh2a	100	89.251	ENSPNAG00000021017	rnaseh2a	100	89.251	Pygocentrus_nattereri
ENSDARG00000018891	rnaseh2a	100	63.380	ENSRNOG00000003504	Rnaseh2a	100	61.489	Rattus_norvegicus
ENSDARG00000018891	rnaseh2a	100	63.380	ENSRBIG00000023554	RNASEH2A	100	62.541	Rhinopithecus_bieti
ENSDARG00000018891	rnaseh2a	100	63.380	ENSRROG00000043799	RNASEH2A	100	62.541	Rhinopithecus_roxellana
ENSDARG00000018891	rnaseh2a	79	43.083	YNL072W	RNH201	81	43.083	Saccharomyces_cerevisiae
ENSDARG00000018891	rnaseh2a	100	63.380	ENSSBOG00000033164	RNASEH2A	100	61.415	Saimiri_boliviensis_boliviensis
ENSDARG00000018891	rnaseh2a	100	69.231	ENSSHAG00000015552	RNASEH2A	100	69.231	Sarcophilus_harrisii
ENSDARG00000018891	rnaseh2a	100	85.342	ENSSFOG00015009692	rnaseh2a	100	85.342	Scleropages_formosus
ENSDARG00000018891	rnaseh2a	100	81.494	ENSSMAG00000013986	rnaseh2a	100	81.494	Scophthalmus_maximus
ENSDARG00000018891	rnaseh2a	100	83.099	ENSSDUG00000005280	rnaseh2a	95	87.050	Seriola_dumerili
ENSDARG00000018891	rnaseh2a	100	84.507	ENSSLDG00000023766	rnaseh2a	100	83.117	Seriola_lalandi_dorsalis
ENSDARG00000018891	rnaseh2a	100	81.494	ENSSPAG00000012769	rnaseh2a	100	81.494	Stegastes_partitus
ENSDARG00000018891	rnaseh2a	100	62.215	ENSSSCG00000013737	RNASEH2A	100	62.215	Sus_scrofa
ENSDARG00000018891	rnaseh2a	100	83.099	ENSTRUG00000000049	rnaseh2a	100	80.323	Takifugu_rubripes
ENSDARG00000018891	rnaseh2a	100	80.195	ENSTNIG00000004533	rnaseh2a	99	80.195	Tetraodon_nigroviridis
ENSDARG00000018891	rnaseh2a	100	61.972	ENSTTRG00000003592	RNASEH2A	100	70.423	Tursiops_truncatus
ENSDARG00000018891	rnaseh2a	100	61.564	ENSUAMG00000019593	RNASEH2A	100	61.564	Ursus_americanus
ENSDARG00000018891	rnaseh2a	100	60.563	ENSUMAG00000006254	-	73	68.966	Ursus_maritimus
ENSDARG00000018891	rnaseh2a	100	69.014	ENSXETG00000004762	rnaseh2a	98	69.408	Xenopus_tropicalis
ENSDARG00000018891	rnaseh2a	100	82.085	ENSXCOG00000013485	rnaseh2a	100	82.085	Xiphophorus_couchianus
ENSDARG00000018891	rnaseh2a	100	81.759	ENSXMAG00000006953	rnaseh2a	100	81.759	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	21873635.	IBA	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	-	IEA	Function
GO:0006298	mismatch repair	21873635.	IBA	Process
GO:0016070	RNA metabolic process	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0032299	ribonuclease H2 complex	21873635.	IBA	Component
GO:0043137	DNA replication, removal of RNA primer	21873635.	IBA	Process