EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000018936 (Gene tree)
Gene ID: 393516
Gene Symbol: zcchc17
Alias: ps1d|zgc:85656
Full Name: zinc finger%2C CCHC domain containing 17
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7389 bases
Position: chr19:42996968-43004356
Accession: ZDB-GENE-040325-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000088874	S1	PF00575.23	9.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000098101	-	1432	-	ENSDARP00000088874	235 (aa)	-	F1QI96

Gene Model

Click here to download ENSDARG00000018936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000018936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000018936	zcchc17	66	68.387	ENSG00000121766	ZCCHC17	96	67.143	Homo_sapiens
ENSDARG00000018936	zcchc17	74	75.723	ENSAPOG00000021724	zcchc17	61	80.132	Acanthochromis_polyacanthus
ENSDARG00000018936	zcchc17	66	68.387	ENSAMEG00000017710	-	63	68.874	Ailuropoda_melanoleuca
ENSDARG00000018936	zcchc17	70	78.049	ENSACIG00000020915	zcchc17	92	77.372	Amphilophus_citrinellus
ENSDARG00000018936	zcchc17	74	75.723	ENSAOCG00000003880	zcchc17	61	80.132	Amphiprion_ocellaris
ENSDARG00000018936	zcchc17	91	70.423	ENSAPEG00000014460	zcchc17	88	70.283	Amphiprion_percula
ENSDARG00000018936	zcchc17	68	76.543	ENSATEG00000015942	zcchc17	66	76.250	Anabas_testudineus
ENSDARG00000018936	zcchc17	61	67.133	ENSACAG00000000389	ZCCHC17	60	67.133	Anolis_carolinensis
ENSDARG00000018936	zcchc17	66	68.387	ENSANAG00000024208	ZCCHC17	96	67.143	Aotus_nancymaae
ENSDARG00000018936	zcchc17	69	80.124	ENSACLG00000019174	zcchc17	61	80.132	Astatotilapia_calliptera
ENSDARG00000018936	zcchc17	76	79.330	ENSAMXG00000020595	zcchc17	76	77.654	Astyanax_mexicanus
ENSDARG00000018936	zcchc17	66	65.806	ENSBTAG00000001432	-	63	66.225	Bos_taurus
ENSDARG00000018936	zcchc17	66	68.387	ENSBTAG00000016818	ZCCHC17	63	68.874	Bos_taurus
ENSDARG00000018936	zcchc17	66	67.097	ENSCJAG00000045207	-	63	67.550	Callithrix_jacchus
ENSDARG00000018936	zcchc17	66	67.742	ENSCJAG00000006259	ZCCHC17	96	66.429	Callithrix_jacchus
ENSDARG00000018936	zcchc17	94	55.856	ENSCAFG00000001857	-	95	56.195	Canis_familiaris
ENSDARG00000018936	zcchc17	66	68.387	ENSCAFG00000011131	-	63	68.874	Canis_familiaris
ENSDARG00000018936	zcchc17	54	67.969	ENSCAFG00020024828	ZCCHC17	86	68.889	Canis_lupus_dingo
ENSDARG00000018936	zcchc17	61	61.806	ENSCAFG00020016032	-	90	61.806	Canis_lupus_dingo
ENSDARG00000018936	zcchc17	66	68.387	ENSCHIG00000015629	-	63	68.874	Capra_hircus
ENSDARG00000018936	zcchc17	70	64.848	ENSTSYG00000000490	-	96	67.143	Carlito_syrichta
ENSDARG00000018936	zcchc17	83	59.391	ENSCAPG00000006774	ZCCHC17	68	68.707	Cavia_aperea
ENSDARG00000018936	zcchc17	66	67.742	ENSCPOG00000022394	-	74	67.763	Cavia_porcellus
ENSDARG00000018936	zcchc17	66	68.387	ENSCPOG00000000106	ZCCHC17	63	68.421	Cavia_porcellus
ENSDARG00000018936	zcchc17	66	68.387	ENSCCAG00000033666	ZCCHC17	96	67.143	Cebus_capucinus
ENSDARG00000018936	zcchc17	66	68.387	ENSCATG00000044586	ZCCHC17	96	67.143	Cercocebus_atys
ENSDARG00000018936	zcchc17	65	68.831	ENSCLAG00000008794	ZCCHC17	63	68.874	Chinchilla_lanigera
ENSDARG00000018936	zcchc17	66	68.387	ENSCSAG00000001032	ZCCHC17	63	68.874	Chlorocebus_sabaeus
ENSDARG00000018936	zcchc17	66	52.903	ENSCHOG00000001581	ZCCHC17	63	52.980	Choloepus_hoffmanni
ENSDARG00000018936	zcchc17	66	68.387	ENSCANG00000038509	ZCCHC17	96	67.143	Colobus_angolensis_palliatus
ENSDARG00000018936	zcchc17	65	68.831	ENSCGRG00001014387	Zcchc17	63	68.874	Cricetulus_griseus_chok1gshd
ENSDARG00000018936	zcchc17	65	68.831	ENSCGRG00000013323	Zcchc17	63	68.874	Cricetulus_griseus_crigri
ENSDARG00000018936	zcchc17	69	79.012	ENSCSEG00000016039	zcchc17	92	77.465	Cynoglossus_semilaevis
ENSDARG00000018936	zcchc17	68	80.000	ENSCVAG00000007112	zcchc17	61	80.795	Cyprinodon_variegatus
ENSDARG00000018936	zcchc17	73	65.143	ENSDNOG00000000509	-	63	68.874	Dasypus_novemcinctus
ENSDARG00000018936	zcchc17	57	68.889	ENSDORG00000004128	Zcchc17	89	68.889	Dipodomys_ordii
ENSDARG00000018936	zcchc17	65	68.627	ENSETEG00000007421	ZCCHC17	63	68.874	Echinops_telfairi
ENSDARG00000018936	zcchc17	66	68.387	ENSEASG00005010819	ZCCHC17	63	68.874	Equus_asinus_asinus
ENSDARG00000018936	zcchc17	66	68.387	ENSECAG00000025040	ZCCHC17	55	68.874	Equus_caballus
ENSDARG00000018936	zcchc17	66	66.452	ENSEEUG00000014855	ZCCHC17	63	66.887	Erinaceus_europaeus
ENSDARG00000018936	zcchc17	69	81.481	ENSELUG00000002450	zcchc17	64	82.237	Esox_lucius
ENSDARG00000018936	zcchc17	66	68.387	ENSFCAG00000004196	ZCCHC17	95	67.143	Felis_catus
ENSDARG00000018936	zcchc17	64	68.212	ENSFALG00000001165	ZCCHC17	60	68.456	Ficedula_albicollis
ENSDARG00000018936	zcchc17	66	68.387	ENSFDAG00000016520	ZCCHC17	63	68.874	Fukomys_damarensis
ENSDARG00000018936	zcchc17	67	77.707	ENSFHEG00000007848	zcchc17	64	78.065	Fundulus_heteroclitus
ENSDARG00000018936	zcchc17	93	60.944	ENSGMOG00000010452	zcchc17	92	59.227	Gadus_morhua
ENSDARG00000018936	zcchc17	64	68.212	ENSGALG00000000618	ZCCHC17	62	68.243	Gallus_gallus
ENSDARG00000018936	zcchc17	67	77.070	ENSGAFG00000015591	zcchc17	63	77.273	Gambusia_affinis
ENSDARG00000018936	zcchc17	69	79.503	ENSGACG00000005616	zcchc17	59	80.263	Gasterosteus_aculeatus
ENSDARG00000018936	zcchc17	67	67.089	ENSGAGG00000019515	ZCCHC17	62	66.887	Gopherus_agassizii
ENSDARG00000018936	zcchc17	66	68.387	ENSGGOG00000009126	ZCCHC17	96	67.143	Gorilla_gorilla
ENSDARG00000018936	zcchc17	69	80.124	ENSHBUG00000018638	zcchc17	61	80.132	Haplochromis_burtoni
ENSDARG00000018936	zcchc17	94	44.595	ENSHGLG00000014866	-	64	56.849	Heterocephalus_glaber_female
ENSDARG00000018936	zcchc17	66	68.387	ENSHGLG00000019323	ZCCHC17	63	68.874	Heterocephalus_glaber_female
ENSDARG00000018936	zcchc17	66	63.226	ENSHGLG00000005931	-	67	63.576	Heterocephalus_glaber_female
ENSDARG00000018936	zcchc17	94	44.595	ENSHGLG00100000976	-	64	56.849	Heterocephalus_glaber_male
ENSDARG00000018936	zcchc17	64	64.238	ENSHGLG00100019907	-	61	64.189	Heterocephalus_glaber_male
ENSDARG00000018936	zcchc17	66	63.226	ENSHGLG00100009772	-	68	63.576	Heterocephalus_glaber_male
ENSDARG00000018936	zcchc17	54	67.969	ENSHGLG00100014521	ZCCHC17	88	68.889	Heterocephalus_glaber_male
ENSDARG00000018936	zcchc17	66	78.846	ENSHCOG00000005075	zcchc17	62	79.470	Hippocampus_comes
ENSDARG00000018936	zcchc17	92	75.799	ENSIPUG00000020511	zcchc17	93	68.778	Ictalurus_punctatus
ENSDARG00000018936	zcchc17	66	68.387	ENSSTOG00000003825	ZCCHC17	63	68.874	Ictidomys_tridecemlineatus
ENSDARG00000018936	zcchc17	74	73.714	ENSKMAG00000003662	zcchc17	62	77.632	Kryptolebias_marmoratus
ENSDARG00000018936	zcchc17	67	78.481	ENSLBEG00000002644	zcchc17	61	79.470	Labrus_bergylta
ENSDARG00000018936	zcchc17	58	72.059	ENSLACG00000016945	ZCCHC17	56	74.242	Latimeria_chalumnae
ENSDARG00000018936	zcchc17	64	78.808	ENSLOCG00000005280	zcchc17	57	78.378	Lepisosteus_oculatus
ENSDARG00000018936	zcchc17	66	68.387	ENSLAFG00000015364	ZCCHC17	62	68.874	Loxodonta_africana
ENSDARG00000018936	zcchc17	66	68.387	ENSMFAG00000039045	ZCCHC17	96	67.143	Macaca_fascicularis
ENSDARG00000018936	zcchc17	66	68.387	ENSMMUG00000012156	ZCCHC17	96	67.143	Macaca_mulatta
ENSDARG00000018936	zcchc17	66	68.387	ENSMNEG00000032021	ZCCHC17	96	67.143	Macaca_nemestrina
ENSDARG00000018936	zcchc17	66	68.387	ENSMLEG00000040817	ZCCHC17	96	67.143	Mandrillus_leucophaeus
ENSDARG00000018936	zcchc17	68	79.245	ENSMAMG00000011701	zcchc17	61	79.605	Mastacembelus_armatus
ENSDARG00000018936	zcchc17	69	80.124	ENSMZEG00005005784	zcchc17	61	80.132	Maylandia_zebra
ENSDARG00000018936	zcchc17	64	68.212	ENSMGAG00000000777	ZCCHC17	60	68.243	Meleagris_gallopavo
ENSDARG00000018936	zcchc17	60	70.922	ENSMAUG00000005269	Zcchc17	58	73.643	Mesocricetus_auratus
ENSDARG00000018936	zcchc17	64	56.667	ENSMICG00000027526	-	67	56.667	Microcebus_murinus
ENSDARG00000018936	zcchc17	66	68.387	ENSMICG00000009354	-	96	67.143	Microcebus_murinus
ENSDARG00000018936	zcchc17	66	60.645	ENSMICG00000028289	-	62	60.927	Microcebus_murinus
ENSDARG00000018936	zcchc17	65	68.831	ENSMOCG00000014937	Zcchc17	63	68.874	Microtus_ochrogaster
ENSDARG00000018936	zcchc17	65	73.856	ENSMMOG00000019813	zcchc17	63	78.169	Mola_mola
ENSDARG00000018936	zcchc17	64	62.252	ENSMODG00000025345	-	68	63.636	Monodelphis_domestica
ENSDARG00000018936	zcchc17	64	71.523	ENSMODG00000017082	-	60	71.622	Monodelphis_domestica
ENSDARG00000018936	zcchc17	64	65.563	ENSMODG00000020372	-	77	66.434	Monodelphis_domestica
ENSDARG00000018936	zcchc17	73	75.581	ENSMALG00000016295	zcchc17	65	79.085	Monopterus_albus
ENSDARG00000018936	zcchc17	65	68.182	MGP_CAROLIEiJ_G0026546	Zcchc17	63	68.212	Mus_caroli
ENSDARG00000018936	zcchc17	65	68.182	ENSMUSG00000028772	Zcchc17	63	68.212	Mus_musculus
ENSDARG00000018936	zcchc17	65	68.182	MGP_PahariEiJ_G0028878	Zcchc17	63	68.212	Mus_pahari
ENSDARG00000018936	zcchc17	65	68.182	MGP_SPRETEiJ_G0027526	Zcchc17	63	68.212	Mus_spretus
ENSDARG00000018936	zcchc17	66	61.290	ENSMPUG00000015442	ZCCHC17	63	61.589	Mustela_putorius_furo
ENSDARG00000018936	zcchc17	67	68.553	ENSMLUG00000000594	ZCCHC17	63	68.874	Myotis_lucifugus
ENSDARG00000018936	zcchc17	66	67.742	ENSNGAG00000022689	Zcchc17	62	68.212	Nannospalax_galili
ENSDARG00000018936	zcchc17	66	68.387	ENSNLEG00000001493	ZCCHC17	96	67.143	Nomascus_leucogenys
ENSDARG00000018936	zcchc17	58	73.188	ENSOPRG00000014449	ZCCHC17	68	73.881	Ochotona_princeps
ENSDARG00000018936	zcchc17	66	68.387	ENSODEG00000003683	ZCCHC17	63	68.874	Octodon_degus
ENSDARG00000018936	zcchc17	69	78.882	ENSONIG00000002308	zcchc17	61	79.470	Oreochromis_niloticus
ENSDARG00000018936	zcchc17	66	61.935	ENSOCUG00000027238	-	63	62.252	Oryctolagus_cuniculus
ENSDARG00000018936	zcchc17	74	74.713	ENSORLG00000011563	zcchc17	69	78.947	Oryzias_latipes
ENSDARG00000018936	zcchc17	74	74.713	ENSORLG00020019636	zcchc17	72	78.947	Oryzias_latipes_hni
ENSDARG00000018936	zcchc17	74	74.138	ENSORLG00015011437	zcchc17	63	78.947	Oryzias_latipes_hsok
ENSDARG00000018936	zcchc17	74	74.713	ENSOMEG00000009464	zcchc17	62	78.289	Oryzias_melastigma
ENSDARG00000018936	zcchc17	66	69.032	ENSOGAG00000013749	ZCCHC17	63	69.536	Otolemur_garnettii
ENSDARG00000018936	zcchc17	66	67.949	ENSOARG00000001618	-	63	68.421	Ovis_aries
ENSDARG00000018936	zcchc17	66	68.387	ENSPPAG00000030937	ZCCHC17	96	67.143	Pan_paniscus
ENSDARG00000018936	zcchc17	66	68.387	ENSPPRG00000003044	ZCCHC17	95	67.143	Panthera_pardus
ENSDARG00000018936	zcchc17	66	68.387	ENSPTIG00000010650	ZCCHC17	95	67.143	Panthera_tigris_altaica
ENSDARG00000018936	zcchc17	66	68.387	ENSPTRG00000000456	ZCCHC17	96	67.143	Pan_troglodytes
ENSDARG00000018936	zcchc17	66	68.387	ENSPANG00000016167	ZCCHC17	96	67.143	Papio_anubis
ENSDARG00000018936	zcchc17	89	70.335	ENSPKIG00000010742	zcchc17	93	62.931	Paramormyrops_kingsleyae
ENSDARG00000018936	zcchc17	65	67.532	ENSPSIG00000007187	ZCCHC17	59	69.178	Pelodiscus_sinensis
ENSDARG00000018936	zcchc17	69	77.778	ENSPMGG00000005830	zcchc17	62	77.483	Periophthalmus_magnuspinnatus
ENSDARG00000018936	zcchc17	65	68.182	ENSPEMG00000015853	-	63	68.212	Peromyscus_maniculatus_bairdii
ENSDARG00000018936	zcchc17	64	73.510	ENSPCIG00000014143	-	61	73.649	Phascolarctos_cinereus
ENSDARG00000018936	zcchc17	70	75.610	ENSPFOG00000007896	zcchc17	66	77.273	Poecilia_formosa
ENSDARG00000018936	zcchc17	69	76.074	ENSPLAG00000007114	zcchc17	62	77.273	Poecilia_latipinna
ENSDARG00000018936	zcchc17	69	76.074	ENSPMEG00000014567	zcchc17	62	77.273	Poecilia_mexicana
ENSDARG00000018936	zcchc17	67	76.433	ENSPREG00000005325	zcchc17	51	76.623	Poecilia_reticulata
ENSDARG00000018936	zcchc17	66	66.452	ENSPPYG00000001617	-	53	66.887	Pongo_abelii
ENSDARG00000018936	zcchc17	66	63.226	ENSPCAG00000011665	ZCCHC17	63	63.576	Procavia_capensis
ENSDARG00000018936	zcchc17	66	68.387	ENSPCOG00000024007	ZCCHC17	96	67.143	Propithecus_coquereli
ENSDARG00000018936	zcchc17	66	68.387	ENSPVAG00000014747	ZCCHC17	63	68.874	Pteropus_vampyrus
ENSDARG00000018936	zcchc17	69	80.124	ENSPNYG00000009648	zcchc17	96	79.562	Pundamilia_nyererei
ENSDARG00000018936	zcchc17	94	79.279	ENSPNAG00000026780	zcchc17	77	83.240	Pygocentrus_nattereri
ENSDARG00000018936	zcchc17	65	68.831	ENSRNOG00000012266	Zcchc17	63	68.874	Rattus_norvegicus
ENSDARG00000018936	zcchc17	66	68.387	ENSRBIG00000033939	ZCCHC17	96	67.143	Rhinopithecus_bieti
ENSDARG00000018936	zcchc17	66	68.387	ENSRROG00000028866	ZCCHC17	96	67.143	Rhinopithecus_roxellana
ENSDARG00000018936	zcchc17	66	68.387	ENSSBOG00000029249	ZCCHC17	96	67.143	Saimiri_boliviensis_boliviensis
ENSDARG00000018936	zcchc17	64	69.536	ENSSHAG00000008748	ZCCHC17	62	69.595	Sarcophilus_harrisii
ENSDARG00000018936	zcchc17	70	80.723	ENSSFOG00015021334	zcchc17	63	81.250	Scleropages_formosus
ENSDARG00000018936	zcchc17	69	79.503	ENSSMAG00000010817	zcchc17	59	79.605	Scophthalmus_maximus
ENSDARG00000018936	zcchc17	69	81.366	ENSSDUG00000009095	zcchc17	60	81.457	Seriola_dumerili
ENSDARG00000018936	zcchc17	71	79.762	ENSSLDG00000009837	zcchc17	88	70.652	Seriola_lalandi_dorsalis
ENSDARG00000018936	zcchc17	65	68.182	ENSSPUG00000006912	ZCCHC17	55	69.286	Sphenodon_punctatus
ENSDARG00000018936	zcchc17	65	78.431	ENSSPAG00000016785	zcchc17	60	78.808	Stegastes_partitus
ENSDARG00000018936	zcchc17	66	68.387	ENSSSCG00000031639	ZCCHC17	63	68.874	Sus_scrofa
ENSDARG00000018936	zcchc17	58	66.667	ENSTGUG00000000817	ZCCHC17	61	66.667	Taeniopygia_guttata
ENSDARG00000018936	zcchc17	74	75.145	ENSTRUG00000013252	zcchc17	63	79.605	Takifugu_rubripes
ENSDARG00000018936	zcchc17	74	73.410	ENSTNIG00000016980	zcchc17	64	78.146	Tetraodon_nigroviridis
ENSDARG00000018936	zcchc17	66	68.387	ENSTTRG00000014870	ZCCHC17	63	68.874	Tursiops_truncatus
ENSDARG00000018936	zcchc17	66	68.387	ENSUAMG00000018258	ZCCHC17	74	69.863	Ursus_americanus
ENSDARG00000018936	zcchc17	66	68.387	ENSUMAG00000009188	-	63	68.874	Ursus_maritimus
ENSDARG00000018936	zcchc17	65	68.182	ENSVPAG00000003834	ZCCHC17	63	68.212	Vicugna_pacos
ENSDARG00000018936	zcchc17	67	69.620	ENSXETG00000012917	zcchc17	81	69.930	Xenopus_tropicalis
ENSDARG00000018936	zcchc17	75	72.727	ENSXCOG00000020147	zcchc17	66	76.923	Xiphophorus_couchianus
ENSDARG00000018936	zcchc17	74	72.989	ENSXMAG00000002980	zcchc17	63	77.273	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function