EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000018961 (Gene tree)
Gene ID: 334050
Gene Symbol: gtpbp4
Alias: GTP binding protein NGB|fi28d07|wu:fi28d07|zgc:55757
Full Name: GTP binding protein 4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 13903 bases
Position: chr2:42361373-42375275
Accession: ZDB-GENE-030131-5982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000002061	NOG1	PF06858.14	1.1e-26	1	1
ENSDARP00000002061	MMR_HSR1	PF01926.23	4.3e-19	1	1
ENSDARP00000002061	NOGCT	PF08155.11	4.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000026339	-	2273	-	ENSDARP00000002061	631 (aa)	-	Q6DRI5
ENSDART00000132128	-	580	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000018961's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000018961's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000018961	gtpbp4	100	82.650	ENSG00000107937	GTPBP4	100	97.143	Homo_sapiens
ENSDARG00000018961	gtpbp4	100	87.066	ENSAPOG00000020433	gtpbp4	100	82.992	Acanthochromis_polyacanthus
ENSDARG00000018961	gtpbp4	100	81.703	ENSAMEG00000001845	GTPBP4	100	81.703	Ailuropoda_melanoleuca
ENSDARG00000018961	gtpbp4	100	83.281	ENSACIG00000018629	gtpbp4	100	83.281	Amphilophus_citrinellus
ENSDARG00000018961	gtpbp4	100	87.224	ENSAOCG00000000427	gtpbp4	93	87.224	Amphiprion_ocellaris
ENSDARG00000018961	gtpbp4	100	87.382	ENSAPEG00000002544	gtpbp4	100	87.382	Amphiprion_percula
ENSDARG00000018961	gtpbp4	100	89.432	ENSATEG00000012635	gtpbp4	95	89.432	Anabas_testudineus
ENSDARG00000018961	gtpbp4	52	76.524	ENSAPLG00000013790	-	100	76.524	Anas_platyrhynchos
ENSDARG00000018961	gtpbp4	100	82.808	ENSACAG00000002943	GTPBP4	100	82.808	Anolis_carolinensis
ENSDARG00000018961	gtpbp4	98	72.408	ENSANAG00000022188	-	99	72.568	Aotus_nancymaae
ENSDARG00000018961	gtpbp4	87	80.193	ENSANAG00000029209	-	100	80.193	Aotus_nancymaae
ENSDARG00000018961	gtpbp4	71	92.188	ENSACLG00000026330	gtpbp4	92	94.667	Astatotilapia_calliptera
ENSDARG00000018961	gtpbp4	100	90.521	ENSAMXG00000019771	gtpbp4	100	90.521	Astyanax_mexicanus
ENSDARG00000018961	gtpbp4	100	82.492	ENSBTAG00000014917	GTPBP4	100	82.492	Bos_taurus
ENSDARG00000018961	gtpbp4	99	53.644	WBGene00020297	nog-1	99	53.768	Caenorhabditis_elegans
ENSDARG00000018961	gtpbp4	100	81.918	ENSCJAG00000008494	-	100	82.075	Callithrix_jacchus
ENSDARG00000018961	gtpbp4	100	80.818	ENSCJAG00000022962	-	100	80.975	Callithrix_jacchus
ENSDARG00000018961	gtpbp4	93	81.090	ENSCAFG00000005536	GTPBP4	100	81.090	Canis_familiaris
ENSDARG00000018961	gtpbp4	100	81.703	ENSCAFG00020004307	GTPBP4	100	81.703	Canis_lupus_dingo
ENSDARG00000018961	gtpbp4	100	82.177	ENSCHIG00000018346	GTPBP4	100	82.177	Capra_hircus
ENSDARG00000018961	gtpbp4	100	82.650	ENSTSYG00000004977	GTPBP4	100	82.650	Carlito_syrichta
ENSDARG00000018961	gtpbp4	98	73.920	ENSCAPG00000002134	GTPBP4	97	73.920	Cavia_aperea
ENSDARG00000018961	gtpbp4	100	82.334	ENSCPOG00000013736	GTPBP4	100	82.334	Cavia_porcellus
ENSDARG00000018961	gtpbp4	99	82.726	ENSCCAG00000021627	-	92	83.043	Cebus_capucinus
ENSDARG00000018961	gtpbp4	100	61.648	ENSCCAG00000030115	-	100	61.173	Cebus_capucinus
ENSDARG00000018961	gtpbp4	100	82.492	ENSCATG00000004303	GTPBP4	100	82.492	Cercocebus_atys
ENSDARG00000018961	gtpbp4	100	82.492	ENSCLAG00000011323	GTPBP4	100	82.492	Chinchilla_lanigera
ENSDARG00000018961	gtpbp4	100	82.650	ENSCSAG00000014097	GTPBP4	100	82.650	Chlorocebus_sabaeus
ENSDARG00000018961	gtpbp4	96	88.949	ENSCHOG00000012602	GTPBP4	88	88.949	Choloepus_hoffmanni
ENSDARG00000018961	gtpbp4	100	83.596	ENSCPBG00000008398	GTPBP4	100	83.596	Chrysemys_picta_bellii
ENSDARG00000018961	gtpbp4	100	65.163	ENSCING00000001957	-	100	65.785	Ciona_intestinalis
ENSDARG00000018961	gtpbp4	100	63.817	ENSCSAVG00000009793	-	99	80.259	Ciona_savignyi
ENSDARG00000018961	gtpbp4	100	78.964	ENSCANG00000014168	GTPBP4	100	78.964	Colobus_angolensis_palliatus
ENSDARG00000018961	gtpbp4	100	82.650	ENSCGRG00001013765	Gtpbp4	100	82.650	Cricetulus_griseus_chok1gshd
ENSDARG00000018961	gtpbp4	100	82.650	ENSCGRG00000012171	Gtpbp4	100	82.650	Cricetulus_griseus_crigri
ENSDARG00000018961	gtpbp4	100	82.492	ENSCSEG00000007352	gtpbp4	100	82.492	Cynoglossus_semilaevis
ENSDARG00000018961	gtpbp4	100	85.647	ENSCVAG00000008993	gtpbp4	100	85.647	Cyprinodon_variegatus
ENSDARG00000018961	gtpbp4	67	75.294	ENSDNOG00000006746	GTPBP4	100	75.294	Dasypus_novemcinctus
ENSDARG00000018961	gtpbp4	82	95.238	ENSDORG00000010884	Gtpbp4	96	95.238	Dipodomys_ordii
ENSDARG00000018961	gtpbp4	100	58.869	FBgn0028473	Non1	100	58.869	Drosophila_melanogaster
ENSDARG00000018961	gtpbp4	74	80.593	ENSETEG00000016840	-	71	80.593	Echinops_telfairi
ENSDARG00000018961	gtpbp4	98	63.724	ENSEBUG00000010311	gtpbp4	99	61.429	Eptatretus_burgeri
ENSDARG00000018961	gtpbp4	100	81.861	ENSEASG00005019082	GTPBP4	100	81.861	Equus_asinus_asinus
ENSDARG00000018961	gtpbp4	100	81.861	ENSECAG00000001700	GTPBP4	93	92.857	Equus_caballus
ENSDARG00000018961	gtpbp4	99	88.140	ENSEEUG00000009889	GTPBP4	91	88.140	Erinaceus_europaeus
ENSDARG00000018961	gtpbp4	100	85.849	ENSELUG00000008578	gtpbp4	96	87.223	Esox_lucius
ENSDARG00000018961	gtpbp4	100	82.334	ENSFCAG00000026213	GTPBP4	100	82.334	Felis_catus
ENSDARG00000018961	gtpbp4	99	83.943	ENSFALG00000006971	GTPBP4	87	83.994	Ficedula_albicollis
ENSDARG00000018961	gtpbp4	100	82.650	ENSFDAG00000000998	GTPBP4	100	82.650	Fukomys_damarensis
ENSDARG00000018961	gtpbp4	100	86.435	ENSFHEG00000012922	gtpbp4	100	86.435	Fundulus_heteroclitus
ENSDARG00000018961	gtpbp4	100	85.174	ENSGMOG00000016090	gtpbp4	100	85.174	Gadus_morhua
ENSDARG00000018961	gtpbp4	100	83.994	ENSGALG00000006703	GTPBP4	100	83.994	Gallus_gallus
ENSDARG00000018961	gtpbp4	100	86.120	ENSGAFG00000002075	gtpbp4	100	86.120	Gambusia_affinis
ENSDARG00000018961	gtpbp4	100	86.593	ENSGACG00000017481	gtpbp4	100	86.593	Gasterosteus_aculeatus
ENSDARG00000018961	gtpbp4	93	83.135	ENSGAGG00000018689	GTPBP4	100	83.135	Gopherus_agassizii
ENSDARG00000018961	gtpbp4	100	82.650	ENSGGOG00000013372	GTPBP4	100	82.650	Gorilla_gorilla
ENSDARG00000018961	gtpbp4	100	87.697	ENSHBUG00000000192	gtpbp4	100	87.697	Haplochromis_burtoni
ENSDARG00000018961	gtpbp4	100	82.334	ENSHGLG00000013071	GTPBP4	100	82.334	Heterocephalus_glaber_female
ENSDARG00000018961	gtpbp4	100	82.334	ENSHGLG00100017850	GTPBP4	100	82.334	Heterocephalus_glaber_male
ENSDARG00000018961	gtpbp4	100	75.118	ENSHGLG00100002964	-	100	75.118	Heterocephalus_glaber_male
ENSDARG00000018961	gtpbp4	100	85.984	ENSHCOG00000011543	gtpbp4	100	85.984	Hippocampus_comes
ENSDARG00000018961	gtpbp4	100	90.379	ENSIPUG00000014417	GTPBP4	100	90.379	Ictalurus_punctatus
ENSDARG00000018961	gtpbp4	100	74.290	ENSSTOG00000023023	-	100	74.290	Ictidomys_tridecemlineatus
ENSDARG00000018961	gtpbp4	100	82.334	ENSSTOG00000010042	-	100	82.334	Ictidomys_tridecemlineatus
ENSDARG00000018961	gtpbp4	100	81.861	ENSJJAG00000010021	Gtpbp4	100	81.861	Jaculus_jaculus
ENSDARG00000018961	gtpbp4	100	85.962	ENSKMAG00000021705	gtpbp4	100	85.962	Kryptolebias_marmoratus
ENSDARG00000018961	gtpbp4	100	82.047	ENSLBEG00000021419	gtpbp4	100	85.544	Labrus_bergylta
ENSDARG00000018961	gtpbp4	100	84.385	ENSLACG00000001449	GTPBP4	100	84.385	Latimeria_chalumnae
ENSDARG00000018961	gtpbp4	100	85.692	ENSLOCG00000012279	gtpbp4	100	85.692	Lepisosteus_oculatus
ENSDARG00000018961	gtpbp4	100	82.334	ENSLAFG00000018578	GTPBP4	100	82.334	Loxodonta_africana
ENSDARG00000018961	gtpbp4	100	82.492	ENSMFAG00000046251	GTPBP4	100	82.492	Macaca_fascicularis
ENSDARG00000018961	gtpbp4	100	79.653	ENSMMUG00000010813	GTPBP4	100	79.653	Macaca_mulatta
ENSDARG00000018961	gtpbp4	100	82.492	ENSMNEG00000044366	GTPBP4	100	82.492	Macaca_nemestrina
ENSDARG00000018961	gtpbp4	100	82.334	ENSMLEG00000039605	GTPBP4	100	82.334	Mandrillus_leucophaeus
ENSDARG00000018961	gtpbp4	100	88.486	ENSMAMG00000013763	gtpbp4	92	88.486	Mastacembelus_armatus
ENSDARG00000018961	gtpbp4	100	87.855	ENSMZEG00005006621	gtpbp4	100	87.855	Maylandia_zebra
ENSDARG00000018961	gtpbp4	100	82.334	ENSMAUG00000000571	Gtpbp4	100	82.334	Mesocricetus_auratus
ENSDARG00000018961	gtpbp4	100	81.861	ENSMICG00000013332	GTPBP4	100	81.861	Microcebus_murinus
ENSDARG00000018961	gtpbp4	100	82.177	ENSMOCG00000002209	Gtpbp4	100	82.177	Microtus_ochrogaster
ENSDARG00000018961	gtpbp4	100	83.754	ENSMMOG00000011257	gtpbp4	100	83.754	Mola_mola
ENSDARG00000018961	gtpbp4	100	84.543	ENSMODG00000005978	GTPBP4	100	84.543	Monodelphis_domestica
ENSDARG00000018961	gtpbp4	100	87.224	ENSMALG00000012488	gtpbp4	100	87.224	Monopterus_albus
ENSDARG00000018961	gtpbp4	99	81.558	MGP_CAROLIEiJ_G0018215	Gtpbp4	99	81.558	Mus_caroli
ENSDARG00000018961	gtpbp4	100	82.177	ENSMUSG00000021149	Gtpbp4	93	92.810	Mus_musculus
ENSDARG00000018961	gtpbp4	100	82.019	MGP_PahariEiJ_G0019265	Gtpbp4	100	82.019	Mus_pahari
ENSDARG00000018961	gtpbp4	99	82.353	MGP_SPRETEiJ_G0019073	Gtpbp4	99	82.353	Mus_spretus
ENSDARG00000018961	gtpbp4	93	81.942	ENSMPUG00000016221	GTPBP4	100	81.942	Mustela_putorius_furo
ENSDARG00000018961	gtpbp4	100	82.177	ENSMLUG00000028192	GTPBP4	100	82.177	Myotis_lucifugus
ENSDARG00000018961	gtpbp4	100	82.492	ENSNGAG00000015364	Gtpbp4	100	82.492	Nannospalax_galili
ENSDARG00000018961	gtpbp4	87	84.444	ENSNBRG00000019965	gtpbp4	86	84.444	Neolamprologus_brichardi
ENSDARG00000018961	gtpbp4	100	82.492	ENSNLEG00000013495	GTPBP4	100	82.492	Nomascus_leucogenys
ENSDARG00000018961	gtpbp4	64	84.848	ENSMEUG00000016215	-	72	84.848	Notamacropus_eugenii
ENSDARG00000018961	gtpbp4	89	89.488	ENSOPRG00000008671	GTPBP4	86	89.488	Ochotona_princeps
ENSDARG00000018961	gtpbp4	100	82.965	ENSODEG00000000962	-	100	82.965	Octodon_degus
ENSDARG00000018961	gtpbp4	100	80.599	ENSODEG00000019152	-	100	80.599	Octodon_degus
ENSDARG00000018961	gtpbp4	100	88.170	ENSONIG00000017707	gtpbp4	100	88.170	Oreochromis_niloticus
ENSDARG00000018961	gtpbp4	99	82.353	ENSOANG00000006095	-	99	82.353	Ornithorhynchus_anatinus
ENSDARG00000018961	gtpbp4	60	79.156	ENSOCUG00000014716	-	100	79.156	Oryctolagus_cuniculus
ENSDARG00000018961	gtpbp4	100	80.442	ENSOCUG00000016120	-	100	80.442	Oryctolagus_cuniculus
ENSDARG00000018961	gtpbp4	100	86.120	ENSORLG00000006151	gtpbp4	100	86.120	Oryzias_latipes
ENSDARG00000018961	gtpbp4	100	86.120	ENSORLG00020020899	gtpbp4	100	86.120	Oryzias_latipes_hni
ENSDARG00000018961	gtpbp4	100	85.962	ENSORLG00015020562	gtpbp4	100	85.962	Oryzias_latipes_hsok
ENSDARG00000018961	gtpbp4	100	85.804	ENSOMEG00000019684	gtpbp4	100	85.804	Oryzias_melastigma
ENSDARG00000018961	gtpbp4	100	82.334	ENSOGAG00000011941	GTPBP4	100	82.808	Otolemur_garnettii
ENSDARG00000018961	gtpbp4	100	81.790	ENSOARG00000015047	GTPBP4	100	81.947	Ovis_aries
ENSDARG00000018961	gtpbp4	100	82.808	ENSPPAG00000042066	GTPBP4	100	82.808	Pan_paniscus
ENSDARG00000018961	gtpbp4	100	82.492	ENSPPRG00000009895	GTPBP4	100	82.492	Panthera_pardus
ENSDARG00000018961	gtpbp4	100	82.650	ENSPTIG00000008569	GTPBP4	100	82.650	Panthera_tigris_altaica
ENSDARG00000018961	gtpbp4	72	86.976	ENSPTRG00000002236	GTPBP4	86	87.723	Pan_troglodytes
ENSDARG00000018961	gtpbp4	100	82.334	ENSPANG00000023543	GTPBP4	100	82.334	Papio_anubis
ENSDARG00000018961	gtpbp4	100	88.486	ENSPKIG00000012301	gtpbp4	100	88.486	Paramormyrops_kingsleyae
ENSDARG00000018961	gtpbp4	57	90.476	ENSPSIG00000005442	GTPBP4	93	90.476	Pelodiscus_sinensis
ENSDARG00000018961	gtpbp4	100	83.596	ENSPMGG00000001462	gtpbp4	100	83.596	Periophthalmus_magnuspinnatus
ENSDARG00000018961	gtpbp4	100	82.177	ENSPEMG00000015091	-	100	82.177	Peromyscus_maniculatus_bairdii
ENSDARG00000018961	gtpbp4	100	61.331	ENSPEMG00000012279	-	100	60.918	Peromyscus_maniculatus_bairdii
ENSDARG00000018961	gtpbp4	100	77.848	ENSPMAG00000000905	gtpbp4	100	77.848	Petromyzon_marinus
ENSDARG00000018961	gtpbp4	100	83.438	ENSPCIG00000026082	GTPBP4	100	83.438	Phascolarctos_cinereus
ENSDARG00000018961	gtpbp4	100	86.120	ENSPFOG00000000026	gtpbp4	100	86.120	Poecilia_formosa
ENSDARG00000018961	gtpbp4	92	87.009	ENSPLAG00000002898	gtpbp4	97	87.009	Poecilia_latipinna
ENSDARG00000018961	gtpbp4	100	85.962	ENSPMEG00000016422	gtpbp4	100	85.962	Poecilia_mexicana
ENSDARG00000018961	gtpbp4	100	82.334	ENSPREG00000019870	gtpbp4	100	82.334	Poecilia_reticulata
ENSDARG00000018961	gtpbp4	100	82.650	ENSPPYG00000002037	GTPBP4	100	82.650	Pongo_abelii
ENSDARG00000018961	gtpbp4	100	77.287	ENSPCOG00000014382	-	100	77.287	Propithecus_coquereli
ENSDARG00000018961	gtpbp4	97	77.724	ENSPCOG00000014602	-	100	77.561	Propithecus_coquereli
ENSDARG00000018961	gtpbp4	91	90.566	ENSPVAG00000005882	GTPBP4	85	90.566	Pteropus_vampyrus
ENSDARG00000018961	gtpbp4	100	77.760	ENSPNYG00000024251	gtpbp4	100	77.760	Pundamilia_nyererei
ENSDARG00000018961	gtpbp4	100	90.852	ENSPNAG00000019977	gtpbp4	100	90.852	Pygocentrus_nattereri
ENSDARG00000018961	gtpbp4	100	81.761	ENSRNOG00000016217	Gtpbp4	100	81.918	Rattus_norvegicus
ENSDARG00000018961	gtpbp4	100	82.808	ENSRBIG00000028875	GTPBP4	100	82.808	Rhinopithecus_bieti
ENSDARG00000018961	gtpbp4	100	82.808	ENSRROG00000030798	GTPBP4	100	82.808	Rhinopithecus_roxellana
ENSDARG00000018961	gtpbp4	99	45.917	YPL093W	-	99	45.917	Saccharomyces_cerevisiae
ENSDARG00000018961	gtpbp4	100	82.233	ENSSBOG00000028421	GTPBP4	100	82.233	Saimiri_boliviensis_boliviensis
ENSDARG00000018961	gtpbp4	99	84.554	ENSSHAG00000014713	GTPBP4	94	84.554	Sarcophilus_harrisii
ENSDARG00000018961	gtpbp4	100	88.328	ENSSFOG00015003167	gtpbp4	100	88.328	Scleropages_formosus
ENSDARG00000018961	gtpbp4	100	86.120	ENSSMAG00000005863	gtpbp4	100	86.120	Scophthalmus_maximus
ENSDARG00000018961	gtpbp4	100	88.644	ENSSDUG00000006534	gtpbp4	100	88.644	Seriola_dumerili
ENSDARG00000018961	gtpbp4	100	88.644	ENSSLDG00000020688	gtpbp4	100	88.644	Seriola_lalandi_dorsalis
ENSDARG00000018961	gtpbp4	60	97.030	ENSSARG00000003409	-	78	97.030	Sorex_araneus
ENSDARG00000018961	gtpbp4	100	83.596	ENSSPUG00000002153	GTPBP4	100	83.596	Sphenodon_punctatus
ENSDARG00000018961	gtpbp4	62	78.338	ENSSPAG00000014583	gtpbp4	100	78.338	Stegastes_partitus
ENSDARG00000018961	gtpbp4	100	80.757	ENSSSCG00000028602	GTPBP4	100	80.757	Sus_scrofa
ENSDARG00000018961	gtpbp4	99	83.200	ENSTGUG00000000820	GTPBP4	100	83.200	Taeniopygia_guttata
ENSDARG00000018961	gtpbp4	100	85.647	ENSTRUG00000003900	gtpbp4	100	85.647	Takifugu_rubripes
ENSDARG00000018961	gtpbp4	100	87.539	ENSTNIG00000007992	gtpbp4	100	87.539	Tetraodon_nigroviridis
ENSDARG00000018961	gtpbp4	100	67.762	ENSTBEG00000003613	GTPBP4	100	67.762	Tupaia_belangeri
ENSDARG00000018961	gtpbp4	100	76.719	ENSTTRG00000011163	GTPBP4	100	76.719	Tursiops_truncatus
ENSDARG00000018961	gtpbp4	100	81.703	ENSUAMG00000013191	GTPBP4	100	81.703	Ursus_americanus
ENSDARG00000018961	gtpbp4	93	80.920	ENSUMAG00000016138	GTPBP4	100	80.920	Ursus_maritimus
ENSDARG00000018961	gtpbp4	100	81.861	ENSVVUG00000008608	GTPBP4	98	81.861	Vulpes_vulpes
ENSDARG00000018961	gtpbp4	100	73.934	ENSXETG00000018097	gtpbp4	100	73.934	Xenopus_tropicalis
ENSDARG00000018961	gtpbp4	100	79.435	ENSXCOG00000019953	gtpbp4	98	79.435	Xiphophorus_couchianus
ENSDARG00000018961	gtpbp4	100	85.400	ENSXMAG00000006719	gtpbp4	100	85.400	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process