EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000019205 (Gene tree)
Gene ID: 557842
Gene Symbol: fam120c
Alias: si:dkey-206f21.2
Full Name: family with sequence similarity 120C
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 28884
Position: chr23: 18386989-18415872
Accession: ZDB-GENE-090313-228
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135430	-	8920	XM_680985	ENSDARP00000113531	1047 (aa)	XP_686077	E9QJ40

Gene Model

Click here to download ENSDARG00000019205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000019205's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000019205	fam120c	95	90.000	ENSG00000184083	FAM120C	90	87.879	Homo_sapiens
ENSDARG00000019205	fam120c	84	65.306	ENSG00000048828	FAM120A	96	52.686	Homo_sapiens
ENSDARG00000019205	fam120c	95	90.000	ENSMUSG00000025262	Fam120c	90	87.879	Mus_musculus
ENSDARG00000019205	fam120c	84	65.306	ENSMUSG00000038014	Fam120a	90	51.727	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component