EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000019529 (Gene tree)
Gene ID: 560788
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly (ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 41411 bases
Position: chr20:43648369-43689779
Accession: ZDB-GENE-030131-3955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000156256	PARP	PF00644.20	6.4e-74	1	1
ENSDARP00000008364	PARP	PF00644.20	6.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000187930	-	3863	-	ENSDARP00000156256	1011 (aa)	-	Q499A8
ENSDART00000017269	-	3802	-	ENSDARP00000008364	1013 (aa)	-	Q5RHR0

Gene Model

Click here to download ENSDARG00000019529's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03410	Base excision repair	KEGG
dre04210	Apoptosis	KEGG
dre04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000019529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000019529	parp1	51	35.337	ENSDARG00000003961	parp3	99	35.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000019529	parp1	100	70.939	ENSG00000143799	PARP1	100	70.479	Homo_sapiens
ENSDARG00000019529	parp1	100	82.793	ENSAPOG00000006414	parp1	100	83.399	Acanthochromis_polyacanthus
ENSDARG00000019529	parp1	96	69.464	ENSAMEG00000014451	PARP1	100	69.324	Ailuropoda_melanoleuca
ENSDARG00000019529	parp1	100	83.186	ENSACIG00000005651	parp1	100	82.694	Amphilophus_citrinellus
ENSDARG00000019529	parp1	100	83.481	ENSAOCG00000021005	parp1	100	84.086	Amphiprion_ocellaris
ENSDARG00000019529	parp1	100	83.481	ENSAPEG00000004784	parp1	100	84.086	Amphiprion_percula
ENSDARG00000019529	parp1	100	82.301	ENSATEG00000010457	parp1	100	83.006	Anabas_testudineus
ENSDARG00000019529	parp1	87	73.303	ENSAPLG00000014039	PARP1	99	73.266	Anas_platyrhynchos
ENSDARG00000019529	parp1	100	71.541	ENSACAG00000006189	PARP1	100	71.443	Anolis_carolinensis
ENSDARG00000019529	parp1	100	70.548	ENSANAG00000032699	PARP1	100	70.508	Aotus_nancymaae
ENSDARG00000019529	parp1	100	83.382	ENSACLG00000015489	parp1	100	82.694	Astatotilapia_calliptera
ENSDARG00000019529	parp1	100	86.092	ENSAMXG00000006465	parp1	100	86.582	Astyanax_mexicanus
ENSDARG00000019529	parp1	100	68.262	ENSBTAG00000000837	PARP1	100	67.934	Bos_taurus
ENSDARG00000019529	parp1	85	43.019	WBGene00004049	parp-1	100	46.008	Caenorhabditis_elegans
ENSDARG00000019529	parp1	100	69.961	ENSCJAG00000012831	PARP1	100	69.824	Callithrix_jacchus
ENSDARG00000019529	parp1	96	69.356	ENSCAFG00000016089	PARP1	100	69.215	Canis_familiaris
ENSDARG00000019529	parp1	100	69.863	ENSCAFG00020001660	PARP1	100	69.727	Canis_lupus_dingo
ENSDARG00000019529	parp1	100	68.164	ENSCHIG00000018072	PARP1	100	67.934	Capra_hircus
ENSDARG00000019529	parp1	90	70.996	ENSTSYG00000003699	PARP1	99	71.397	Carlito_syrichta
ENSDARG00000019529	parp1	96	58.189	ENSCAPG00000011113	-	99	58.096	Cavia_aperea
ENSDARG00000019529	parp1	100	69.638	ENSCPOG00000015643	-	100	69.472	Cavia_porcellus
ENSDARG00000019529	parp1	100	70.479	ENSCCAG00000033484	PARP1	100	70.088	Cebus_capucinus
ENSDARG00000019529	parp1	100	70.088	ENSCATG00000038981	PARP1	100	69.599	Cercocebus_atys
ENSDARG00000019529	parp1	99	69.813	ENSCLAG00000006637	PARP1	99	69.518	Chinchilla_lanigera
ENSDARG00000019529	parp1	66	75.781	ENSCHOG00000003539	PARP1	66	75.781	Choloepus_hoffmanni
ENSDARG00000019529	parp1	99	72.682	ENSCPBG00000011958	PARP1	99	72.559	Chrysemys_picta_bellii
ENSDARG00000019529	parp1	98	68.600	ENSCANG00000041340	PARP1	100	69.043	Colobus_angolensis_palliatus
ENSDARG00000019529	parp1	100	69.736	ENSCGRG00001020559	Parp1	100	69.208	Cricetulus_griseus_chok1gshd
ENSDARG00000019529	parp1	96	69.694	ENSCGRG00000004864	Parp1	100	69.145	Cricetulus_griseus_crigri
ENSDARG00000019529	parp1	96	87.349	ENSCSEG00000020665	parp1	100	87.349	Cynoglossus_semilaevis
ENSDARG00000019529	parp1	99	82.041	ENSCVAG00000021372	parp1	99	81.957	Cyprinodon_variegatus
ENSDARG00000019529	parp1	96	68.303	ENSDNOG00000012059	PARP1	100	68.437	Dasypus_novemcinctus
ENSDARG00000019529	parp1	98	67.300	ENSDORG00000005234	Parp1	100	68.260	Dipodomys_ordii
ENSDARG00000019529	parp1	99	41.379	FBgn0010247	Parp	99	41.246	Drosophila_melanogaster
ENSDARG00000019529	parp1	87	76.562	ENSETEG00000013254	PARP1	88	76.562	Echinops_telfairi
ENSDARG00000019529	parp1	97	58.375	ENSEBUG00000005820	parp1	100	58.559	Eptatretus_burgeri
ENSDARG00000019529	parp1	98	69.622	ENSEASG00005013275	PARP1	99	69.682	Equus_asinus_asinus
ENSDARG00000019529	parp1	100	69.667	ENSECAG00000019207	PARP1	100	69.824	Equus_caballus
ENSDARG00000019529	parp1	99	67.780	ENSEEUG00000012253	PARP1	99	67.843	Erinaceus_europaeus
ENSDARG00000019529	parp1	99	83.996	ENSELUG00000017336	parp1	100	82.428	Esox_lucius
ENSDARG00000019529	parp1	97	69.909	ENSFCAG00000005777	PARP1	100	69.332	Felis_catus
ENSDARG00000019529	parp1	99	73.238	ENSFALG00000011578	PARP1	100	72.921	Ficedula_albicollis
ENSDARG00000019529	parp1	96	68.469	ENSFDAG00000017662	PARP1	100	68.265	Fukomys_damarensis
ENSDARG00000019529	parp1	100	82.417	ENSFHEG00000001117	parp1	100	82.237	Fundulus_heteroclitus
ENSDARG00000019529	parp1	99	81.311	ENSGMOG00000014929	parp1	100	81.525	Gadus_morhua
ENSDARG00000019529	parp1	99	73.767	ENSGALG00000009228	PARP1	100	73.107	Gallus_gallus
ENSDARG00000019529	parp1	100	82.793	ENSGAFG00000010450	parp1	100	82.613	Gambusia_affinis
ENSDARG00000019529	parp1	100	81.943	ENSGACG00000011280	parp1	100	82.728	Gasterosteus_aculeatus
ENSDARG00000019529	parp1	99	72.359	ENSGAGG00000010066	PARP1	99	72.336	Gopherus_agassizii
ENSDARG00000019529	parp1	100	70.744	ENSGGOG00000006308	PARP1	100	70.186	Gorilla_gorilla
ENSDARG00000019529	parp1	100	83.694	ENSHBUG00000010490	parp1	100	83.595	Haplochromis_burtoni
ENSDARG00000019529	parp1	96	68.807	ENSHGLG00000003992	PARP1	93	68.122	Heterocephalus_glaber_female
ENSDARG00000019529	parp1	96	68.807	ENSHGLG00100016965	PARP1	93	68.122	Heterocephalus_glaber_male
ENSDARG00000019529	parp1	100	79.941	ENSHCOG00000011619	parp1	100	80.645	Hippocampus_comes
ENSDARG00000019529	parp1	100	85.406	ENSIPUG00000020250	parp1	100	85.896	Ictalurus_punctatus
ENSDARG00000019529	parp1	100	70.312	ENSSTOG00000016000	PARP1	100	70.020	Ictidomys_tridecemlineatus
ENSDARG00000019529	parp1	100	69.638	ENSJJAG00000023497	Parp1	100	69.336	Jaculus_jaculus
ENSDARG00000019529	parp1	100	82.515	ENSKMAG00000011627	parp1	100	82.711	Kryptolebias_marmoratus
ENSDARG00000019529	parp1	100	83.382	ENSLBEG00000013376	parp1	100	83.776	Labrus_bergylta
ENSDARG00000019529	parp1	99	56.133	ENSLACG00000002735	PARP1	99	56.471	Latimeria_chalumnae
ENSDARG00000019529	parp1	100	80.743	ENSLOCG00000015798	parp1	100	81.036	Lepisosteus_oculatus
ENSDARG00000019529	parp1	96	68.094	ENSLAFG00000007830	PARP1	100	67.745	Loxodonta_africana
ENSDARG00000019529	parp1	100	70.088	ENSMFAG00000002526	PARP1	100	69.599	Macaca_fascicularis
ENSDARG00000019529	parp1	100	70.186	ENSMMUG00000021820	PARP1	100	69.697	Macaca_mulatta
ENSDARG00000019529	parp1	100	70.186	ENSMNEG00000034074	PARP1	100	69.697	Macaca_nemestrina
ENSDARG00000019529	parp1	100	68.324	ENSMLEG00000012344	PARP1	100	67.836	Mandrillus_leucophaeus
ENSDARG00000019529	parp1	100	82.891	ENSMAMG00000020652	parp1	100	83.415	Mastacembelus_armatus
ENSDARG00000019529	parp1	100	83.988	ENSMZEG00005016907	parp1	100	83.890	Maylandia_zebra
ENSDARG00000019529	parp1	99	73.108	ENSMGAG00000007760	PARP1	100	73.178	Meleagris_gallopavo
ENSDARG00000019529	parp1	100	69.638	ENSMAUG00000008306	Parp1	100	69.013	Mesocricetus_auratus
ENSDARG00000019529	parp1	100	67.578	ENSMICG00000017076	PARP1	100	66.960	Microcebus_murinus
ENSDARG00000019529	parp1	100	69.442	ENSMOCG00000014315	Parp1	100	69.013	Microtus_ochrogaster
ENSDARG00000019529	parp1	100	81.898	ENSMMOG00000015966	parp1	100	81.507	Mola_mola
ENSDARG00000019529	parp1	100	70.605	ENSMODG00000006076	PARP1	100	70.996	Monodelphis_domestica
ENSDARG00000019529	parp1	100	80.039	ENSMALG00000004057	parp1	100	80.550	Monopterus_albus
ENSDARG00000019529	parp1	100	69.178	MGP_CAROLIEiJ_G0014978	Parp1	100	74.490	Mus_caroli
ENSDARG00000019529	parp1	100	69.080	ENSMUSG00000026496	Parp1	99	74.490	Mus_musculus
ENSDARG00000019529	parp1	100	69.080	MGP_SPRETEiJ_G0015777	Parp1	100	74.490	Mus_spretus
ENSDARG00000019529	parp1	100	69.951	ENSMPUG00000004585	PARP1	100	69.434	Mustela_putorius_furo
ENSDARG00000019529	parp1	74	76.905	ENSMLUG00000012285	PARP1	83	77.442	Myotis_lucifugus
ENSDARG00000019529	parp1	100	69.599	ENSNGAG00000003885	Parp1	100	69.013	Nannospalax_galili
ENSDARG00000019529	parp1	100	83.284	ENSNBRG00000017434	parp1	100	82.596	Neolamprologus_brichardi
ENSDARG00000019529	parp1	97	72.115	ENSNLEG00000013905	PARP1	100	72.115	Nomascus_leucogenys
ENSDARG00000019529	parp1	67	79.403	ENSMEUG00000007720	PARP1	87	79.403	Notamacropus_eugenii
ENSDARG00000019529	parp1	100	70.939	ENSOPRG00000011722	PARP1	100	70.703	Ochotona_princeps
ENSDARG00000019529	parp1	100	69.306	ENSODEG00000007424	PARP1	100	69.110	Octodon_degus
ENSDARG00000019529	parp1	100	83.399	ENSONIG00000013486	parp1	100	83.792	Oreochromis_niloticus
ENSDARG00000019529	parp1	96	72.041	ENSOANG00000001488	PARP1	100	72.098	Ornithorhynchus_anatinus
ENSDARG00000019529	parp1	100	71.065	ENSOCUG00000017820	PARP1	100	70.732	Oryctolagus_cuniculus
ENSDARG00000019529	parp1	100	81.525	ENSORLG00000013691	parp1	100	81.158	Oryzias_latipes
ENSDARG00000019529	parp1	99	80.909	ENSORLG00020001074	parp1	99	80.527	Oryzias_latipes_hni
ENSDARG00000019529	parp1	100	81.427	ENSORLG00015007090	parp1	100	81.060	Oryzias_latipes_hsok
ENSDARG00000019529	parp1	100	70.605	ENSOGAG00000016206	PARP1	100	69.727	Otolemur_garnettii
ENSDARG00000019529	parp1	100	68.359	ENSOARG00000000811	PARP1	100	68.226	Ovis_aries
ENSDARG00000019529	parp1	100	70.744	ENSPPAG00000040862	PARP1	100	70.283	Pan_paniscus
ENSDARG00000019529	parp1	96	69.521	ENSPPRG00000003528	PARP1	100	69.176	Panthera_pardus
ENSDARG00000019529	parp1	93	59.077	ENSPTIG00000009102	PARP1	98	58.700	Panthera_tigris_altaica
ENSDARG00000019529	parp1	100	70.744	ENSPTRG00000002049	PARP1	100	70.283	Pan_troglodytes
ENSDARG00000019529	parp1	100	70.215	ENSPANG00000011198	PARP1	100	69.727	Papio_anubis
ENSDARG00000019529	parp1	100	82.891	ENSPKIG00000006039	parp1	100	83.121	Paramormyrops_kingsleyae
ENSDARG00000019529	parp1	99	71.327	ENSPSIG00000016374	PARP1	100	71.662	Pelodiscus_sinensis
ENSDARG00000019529	parp1	100	79.449	ENSPMGG00000008936	parp1	100	79.449	Periophthalmus_magnuspinnatus
ENSDARG00000019529	parp1	100	69.540	ENSPEMG00000020230	Parp1	100	68.982	Peromyscus_maniculatus_bairdii
ENSDARG00000019529	parp1	99	70.866	ENSPCIG00000006436	PARP1	99	71.120	Phascolarctos_cinereus
ENSDARG00000019529	parp1	100	82.129	ENSPFOG00000002342	parp1	100	81.445	Poecilia_formosa
ENSDARG00000019529	parp1	100	83.104	ENSPLAG00000000909	parp1	100	82.809	Poecilia_latipinna
ENSDARG00000019529	parp1	100	83.382	ENSPMEG00000013979	parp1	100	83.202	Poecilia_mexicana
ENSDARG00000019529	parp1	100	83.284	ENSPREG00000001114	parp1	100	83.104	Poecilia_reticulata
ENSDARG00000019529	parp1	96	70.510	ENSPPYG00000000164	PARP1	100	69.796	Pongo_abelii
ENSDARG00000019529	parp1	60	78.086	ENSPCAG00000005558	-	59	78.086	Procavia_capensis
ENSDARG00000019529	parp1	100	69.961	ENSPCOG00000016918	PARP1	100	70.117	Propithecus_coquereli
ENSDARG00000019529	parp1	92	76.415	ENSPVAG00000005543	PARP1	85	78.049	Pteropus_vampyrus
ENSDARG00000019529	parp1	100	83.382	ENSPNYG00000009702	parp1	100	82.694	Pundamilia_nyererei
ENSDARG00000019529	parp1	100	88.051	ENSPNAG00000002787	parp1	100	88.051	Pygocentrus_nattereri
ENSDARG00000019529	parp1	99	69.587	ENSRNOG00000003084	Parp1	99	69.155	Rattus_norvegicus
ENSDARG00000019529	parp1	100	69.990	ENSRBIG00000044893	PARP1	100	69.501	Rhinopithecus_bieti
ENSDARG00000019529	parp1	99	52.028	ENSRROG00000040615	-	97	58.442	Rhinopithecus_roxellana
ENSDARG00000019529	parp1	100	69.990	ENSRROG00000029280	PARP1	100	69.501	Rhinopithecus_roxellana
ENSDARG00000019529	parp1	100	70.352	ENSSBOG00000010144	PARP1	100	70.341	Saimiri_boliviensis_boliviensis
ENSDARG00000019529	parp1	96	70.744	ENSSHAG00000001991	PARP1	100	70.948	Sarcophilus_harrisii
ENSDARG00000019529	parp1	100	83.121	ENSSFOG00015020017	parp1	100	83.056	Scleropages_formosus
ENSDARG00000019529	parp1	100	82.596	ENSSMAG00000013799	parp1	100	83.202	Scophthalmus_maximus
ENSDARG00000019529	parp1	100	83.776	ENSSDUG00000016626	parp1	100	84.381	Seriola_dumerili
ENSDARG00000019529	parp1	100	83.579	ENSSLDG00000006384	parp1	100	84.185	Seriola_lalandi_dorsalis
ENSDARG00000019529	parp1	53	77.315	ENSSARG00000009436	-	58	85.714	Sorex_araneus
ENSDARG00000019529	parp1	100	68.468	ENSSPUG00000007790	PARP1	100	68.195	Sphenodon_punctatus
ENSDARG00000019529	parp1	100	81.004	ENSSPAG00000019074	parp1	100	83.387	Stegastes_partitus
ENSDARG00000019529	parp1	100	69.472	ENSSSCG00000023660	PARP1	100	68.768	Sus_scrofa
ENSDARG00000019529	parp1	98	72.788	ENSTGUG00000004260	-	100	72.887	Taeniopygia_guttata
ENSDARG00000019529	parp1	100	81.219	ENSTRUG00000014490	parp1	100	81.729	Takifugu_rubripes
ENSDARG00000019529	parp1	100	81.366	ENSTNIG00000016384	parp1	100	81.463	Tetraodon_nigroviridis
ENSDARG00000019529	parp1	83	77.733	ENSTBEG00000002364	PARP1	92	77.733	Tupaia_belangeri
ENSDARG00000019529	parp1	100	65.264	ENSTTRG00000000188	PARP1	100	65.073	Tursiops_truncatus
ENSDARG00000019529	parp1	96	69.919	ENSUAMG00000014388	PARP1	100	69.614	Ursus_americanus
ENSDARG00000019529	parp1	96	63.136	ENSUMAG00000014555	PARP1	99	63.238	Ursus_maritimus
ENSDARG00000019529	parp1	83	77.559	ENSVPAG00000011411	PARP1	83	77.559	Vicugna_pacos
ENSDARG00000019529	parp1	96	69.254	ENSVVUG00000001655	PARP1	100	69.215	Vulpes_vulpes
ENSDARG00000019529	parp1	98	71.029	ENSXETG00000022610	parp1	99	71.129	Xenopus_tropicalis
ENSDARG00000019529	parp1	100	82.694	ENSXMAG00000003632	parp1	100	82.301	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003950	NAD+ ADP-ribosyltransferase activity	21873635.	IBA	Function
GO:0003950	NAD+ ADP-ribosyltransferase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0006302	double-strand break repair	21873635.	IBA	Process
GO:0006471	protein ADP-ribosylation	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0016757	transferase activity, transferring glycosyl groups	-	IEA	Function
GO:0051287	NAD binding	-	IEA	Function
GO:0070212	protein poly-ADP-ribosylation	21873635.	IBA	Process
GO:1990404	protein ADP-ribosylase activity	21873635.	IBA	Function