EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000020258 (Gene tree)
Gene ID: 323597
Gene Symbol: ewsr1a
Alias: fc04c01|wu:fc04c01
Full Name: EWS RNA-binding protein 1a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 12833 bases
Position: chr10:7975585-7988417
Accession: ZDB-GENE-030131-2317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000024102	zf-RanBP	PF00641.18	2.9e-11	1	1
ENSDARP00000024102	RRM_1	PF00076.22	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138942	-	497	-	-	- (aa)	-	-
ENSDART00000141445	-	986	XM_021479110	ENSDARP00000119576	325 (aa)	XP_021334785	E9QEH8
ENSDART00000146734	-	1251	-	-	- (aa)	-	-
ENSDART00000024282	-	2456	XM_021479109	ENSDARP00000024102	626 (aa)	XP_021334784	A0A0B4J1A5

Gene Model

Click here to download ENSDARG00000020258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000020258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000020258	ewsr1a	84	52.030	ENSG00000182944	EWSR1	92	49.669	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	17912356.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003682	chromatin binding	25617839.	IDA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005515	protein binding	25617839.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0007088	regulation of mitotic nuclear division	27557633.	IMP	Process
GO:0021954	central nervous system neuron development	17912356.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051256	mitotic spindle midzone assembly	27557633.	IMP	Process
GO:1903041	regulation of chondrocyte hypertrophy	25617839.	IMP	Process