EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000020841 (Gene tree)
Gene ID: 334784
Gene Symbol: rbm7
Alias: fa03f03|wu:fa03f03|zgc:77304
Full Name: RNA binding motif protein 7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5762 bases
Position: chr18:47301086-47306847
Accession: ZDB-GENE-030131-6724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000007431	RRM_1	PF00076.22	2.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000009775	-	1462	-	ENSDARP00000007431	252 (aa)	-	Q6P0F4

Gene Model

Click here to download ENSDARG00000020841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000020841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000020841	rbm7	99	42.336	ENSG00000076053	RBM7	97	59.732	Homo_sapiens
ENSDARG00000020841	rbm7	96	48.689	ENSAPOG00000012768	rbm7	99	47.909	Acanthochromis_polyacanthus
ENSDARG00000020841	rbm7	99	42.910	ENSAMEG00000013276	-	98	42.322	Ailuropoda_melanoleuca
ENSDARG00000020841	rbm7	96	50.373	ENSAOCG00000004178	rbm7	99	51.866	Amphiprion_ocellaris
ENSDARG00000020841	rbm7	96	50.000	ENSAPEG00000021981	rbm7	99	51.493	Amphiprion_percula
ENSDARG00000020841	rbm7	74	39.320	ENSAPLG00000005180	-	91	38.350	Anas_platyrhynchos
ENSDARG00000020841	rbm7	99	37.591	ENSACAG00000011589	-	97	38.406	Anolis_carolinensis
ENSDARG00000020841	rbm7	57	56.757	ENSANAG00000031879	-	92	59.459	Aotus_nancymaae
ENSDARG00000020841	rbm7	59	52.439	ENSANAG00000031340	-	96	58.710	Aotus_nancymaae
ENSDARG00000020841	rbm7	81	50.239	ENSACLG00000001203	rbm7	100	44.649	Astatotilapia_calliptera
ENSDARG00000020841	rbm7	99	67.790	ENSAMXG00000037251	rbm7	100	67.790	Astyanax_mexicanus
ENSDARG00000020841	rbm7	99	43.284	ENSBTAG00000008219	RBM7	98	43.704	Bos_taurus
ENSDARG00000020841	rbm7	99	42.537	ENSCJAG00000011949	-	94	60.135	Callithrix_jacchus
ENSDARG00000020841	rbm7	99	43.820	ENSCAFG00000013514	-	98	43.233	Canis_familiaris
ENSDARG00000020841	rbm7	99	43.820	ENSCAFG00020002518	-	96	56.954	Canis_lupus_dingo
ENSDARG00000020841	rbm7	99	43.284	ENSCHIG00000010879	-	98	44.649	Capra_hircus
ENSDARG00000020841	rbm7	99	43.284	ENSCHIG00000008632	-	98	44.649	Capra_hircus
ENSDARG00000020841	rbm7	99	44.565	ENSTSYG00000013731	-	98	44.853	Carlito_syrichta
ENSDARG00000020841	rbm7	87	40.083	ENSCAPG00000012045	-	98	39.834	Cavia_aperea
ENSDARG00000020841	rbm7	89	39.044	ENSCPOG00000034273	-	98	40.891	Cavia_porcellus
ENSDARG00000020841	rbm7	99	40.909	ENSCCAG00000036534	-	98	43.284	Cebus_capucinus
ENSDARG00000020841	rbm7	99	41.091	ENSCATG00000037361	-	98	42.222	Cercocebus_atys
ENSDARG00000020841	rbm7	99	44.118	ENSCLAG00000014875	-	98	43.590	Chinchilla_lanigera
ENSDARG00000020841	rbm7	99	41.241	ENSCSAG00000002756	-	98	42.963	Chlorocebus_sabaeus
ENSDARG00000020841	rbm7	57	58.108	ENSCHOG00000012747	-	97	60.811	Choloepus_hoffmanni
ENSDARG00000020841	rbm7	60	55.625	ENSCPBG00000009366	-	82	57.237	Chrysemys_picta_bellii
ENSDARG00000020841	rbm7	99	40.876	ENSCANG00000031398	-	98	42.593	Colobus_angolensis_palliatus
ENSDARG00000020841	rbm7	98	44.649	ENSCGRG00001019236	Rbm7	97	44.074	Cricetulus_griseus_chok1gshd
ENSDARG00000020841	rbm7	98	45.018	ENSCGRG00000005045	Rbm7	97	44.444	Cricetulus_griseus_crigri
ENSDARG00000020841	rbm7	93	45.914	ENSCSEG00000002160	rbm7	98	46.304	Cynoglossus_semilaevis
ENSDARG00000020841	rbm7	98	52.964	ENSCVAG00000023415	rbm7	91	52.964	Cyprinodon_variegatus
ENSDARG00000020841	rbm7	99	43.590	ENSDNOG00000018423	-	98	44.689	Dasypus_novemcinctus
ENSDARG00000020841	rbm7	98	44.444	ENSDORG00000029149	Rbm7	97	43.866	Dipodomys_ordii
ENSDARG00000020841	rbm7	60	54.902	ENSETEG00000015869	-	98	39.259	Echinops_telfairi
ENSDARG00000020841	rbm7	99	43.333	ENSEASG00005006676	-	98	42.007	Equus_asinus_asinus
ENSDARG00000020841	rbm7	99	43.911	ENSECAG00000004636	-	98	42.963	Equus_caballus
ENSDARG00000020841	rbm7	60	54.375	ENSEEUG00000015854	-	58	56.774	Erinaceus_europaeus
ENSDARG00000020841	rbm7	100	54.074	ENSELUG00000017868	rbm7	100	53.704	Esox_lucius
ENSDARG00000020841	rbm7	99	42.537	ENSFCAG00000040484	-	98	40.809	Felis_catus
ENSDARG00000020841	rbm7	63	44.937	ENSFCAG00000018199	RBM11	59	46.309	Felis_catus
ENSDARG00000020841	rbm7	96	40.441	ENSFALG00000010039	-	86	40.288	Ficedula_albicollis
ENSDARG00000020841	rbm7	75	34.921	ENSFDAG00000012193	RBM11	54	43.697	Fukomys_damarensis
ENSDARG00000020841	rbm7	99	41.176	ENSFDAG00000010616	-	98	40.221	Fukomys_damarensis
ENSDARG00000020841	rbm7	93	42.063	ENSGMOG00000013362	rbm7	91	41.221	Gadus_morhua
ENSDARG00000020841	rbm7	99	42.500	ENSGALG00000007017	RBM7	98	41.935	Gallus_gallus
ENSDARG00000020841	rbm7	98	50.787	ENSGAFG00000000870	rbm7	92	50.787	Gambusia_affinis
ENSDARG00000020841	rbm7	96	48.679	ENSGACG00000006628	rbm7	99	47.909	Gasterosteus_aculeatus
ENSDARG00000020841	rbm7	99	39.322	ENSGAGG00000021127	-	98	38.983	Gopherus_agassizii
ENSDARG00000020841	rbm7	60	56.962	ENSGGOG00000009941	-	61	74.390	Gorilla_gorilla
ENSDARG00000020841	rbm7	81	51.442	ENSHBUG00000004319	rbm7	100	45.387	Haplochromis_burtoni
ENSDARG00000020841	rbm7	95	40.154	ENSHGLG00000016655	-	97	40.856	Heterocephalus_glaber_female
ENSDARG00000020841	rbm7	58	51.701	ENSHGLG00000013918	-	97	51.701	Heterocephalus_glaber_female
ENSDARG00000020841	rbm7	99	44.853	ENSHGLG00000018700	RBM7	98	44.280	Heterocephalus_glaber_female
ENSDARG00000020841	rbm7	98	36.704	ENSHGLG00000014428	-	82	58.947	Heterocephalus_glaber_female
ENSDARG00000020841	rbm7	85	38.073	ENSHGLG00000013951	RBM11	59	46.939	Heterocephalus_glaber_female
ENSDARG00000020841	rbm7	99	38.290	ENSHGLG00000002486	-	93	37.687	Heterocephalus_glaber_female
ENSDARG00000020841	rbm7	85	38.073	ENSHGLG00100007848	RBM11	59	46.939	Heterocephalus_glaber_male
ENSDARG00000020841	rbm7	58	51.701	ENSHGLG00100015249	-	97	51.701	Heterocephalus_glaber_male
ENSDARG00000020841	rbm7	98	36.704	ENSHGLG00100011703	-	82	58.947	Heterocephalus_glaber_male
ENSDARG00000020841	rbm7	99	44.485	ENSHGLG00100005358	-	98	43.911	Heterocephalus_glaber_male
ENSDARG00000020841	rbm7	95	40.154	ENSHGLG00100009317	-	97	40.856	Heterocephalus_glaber_male
ENSDARG00000020841	rbm7	99	38.290	ENSHGLG00100011792	-	93	37.687	Heterocephalus_glaber_male
ENSDARG00000020841	rbm7	100	66.045	ENSIPUG00000009397	rbm7	100	66.045	Ictalurus_punctatus
ENSDARG00000020841	rbm7	96	43.265	ENSSTOG00000031973	-	98	42.857	Ictidomys_tridecemlineatus
ENSDARG00000020841	rbm7	99	39.560	ENSSTOG00000012459	-	98	38.971	Ictidomys_tridecemlineatus
ENSDARG00000020841	rbm7	99	43.956	ENSJJAG00000011823	-	98	44.853	Jaculus_jaculus
ENSDARG00000020841	rbm7	97	39.850	ENSJJAG00000016540	-	96	38.868	Jaculus_jaculus
ENSDARG00000020841	rbm7	100	47.312	ENSLBEG00000024902	rbm7	94	51.938	Labrus_bergylta
ENSDARG00000020841	rbm7	99	45.421	ENSLACG00000018620	-	99	44.689	Latimeria_chalumnae
ENSDARG00000020841	rbm7	99	50.385	ENSLOCG00000002408	rbm7	98	51.527	Lepisosteus_oculatus
ENSDARG00000020841	rbm7	99	42.701	ENSLAFG00000012444	-	98	43.382	Loxodonta_africana
ENSDARG00000020841	rbm7	99	40.876	ENSMFAG00000000965	-	98	42.593	Macaca_fascicularis
ENSDARG00000020841	rbm7	99	42.125	ENSMMUG00000012270	RBM7	98	42.379	Macaca_mulatta
ENSDARG00000020841	rbm7	98	41.176	ENSMNEG00000005397	-	97	42.910	Macaca_nemestrina
ENSDARG00000020841	rbm7	99	40.000	ENSMLEG00000041953	-	98	42.222	Mandrillus_leucophaeus
ENSDARG00000020841	rbm7	100	49.624	ENSMAMG00000014145	rbm7	100	50.376	Mastacembelus_armatus
ENSDARG00000020841	rbm7	81	50.718	ENSMZEG00005013295	rbm7	100	45.018	Maylandia_zebra
ENSDARG00000020841	rbm7	99	43.273	ENSMGAG00000003004	-	98	43.273	Meleagris_gallopavo
ENSDARG00000020841	rbm7	59	56.291	ENSMAUG00000017938	-	95	56.291	Mesocricetus_auratus
ENSDARG00000020841	rbm7	98	42.909	ENSMAUG00000001942	-	97	41.912	Mesocricetus_auratus
ENSDARG00000020841	rbm7	99	44.043	ENSMICG00000042981	-	98	43.841	Microcebus_murinus
ENSDARG00000020841	rbm7	96	44.737	ENSMOCG00000009674	Rbm7	97	45.149	Microtus_ochrogaster
ENSDARG00000020841	rbm7	99	41.877	ENSMMOG00000004967	rbm7	99	42.238	Mola_mola
ENSDARG00000020841	rbm7	99	45.390	ENSMODG00000013918	-	99	45.230	Monodelphis_domestica
ENSDARG00000020841	rbm7	91	48.739	ENSMALG00000010901	rbm7	84	48.739	Monopterus_albus
ENSDARG00000020841	rbm7	85	38.532	MGP_CAROLIEiJ_G0020874	Rbm11	86	37.273	Mus_caroli
ENSDARG00000020841	rbm7	98	43.173	MGP_CAROLIEiJ_G0032167	Rbm7	97	42.963	Mus_caroli
ENSDARG00000020841	rbm7	98	44.074	ENSMUSG00000042396	Rbm7	91	58.784	Mus_musculus
ENSDARG00000020841	rbm7	85	37.615	ENSMUSG00000032940	Rbm11	86	37.727	Mus_musculus
ENSDARG00000020841	rbm7	85	37.963	MGP_PahariEiJ_G0016578	Rbm11	50	50.806	Mus_pahari
ENSDARG00000020841	rbm7	98	43.284	MGP_PahariEiJ_G0015035	Rbm7	97	42.910	Mus_pahari
ENSDARG00000020841	rbm7	85	37.156	MGP_SPRETEiJ_G0021780	Rbm11	86	37.273	Mus_spretus
ENSDARG00000020841	rbm7	98	43.704	MGP_SPRETEiJ_G0033306	Rbm7	97	43.494	Mus_spretus
ENSDARG00000020841	rbm7	99	44.403	ENSMPUG00000003941	-	98	43.820	Mustela_putorius_furo
ENSDARG00000020841	rbm7	99	43.066	ENSMLUG00000023234	-	57	60.390	Myotis_lucifugus
ENSDARG00000020841	rbm7	98	43.173	ENSNGAG00000006244	-	97	44.074	Nannospalax_galili
ENSDARG00000020841	rbm7	81	51.196	ENSNBRG00000017104	rbm7	90	47.755	Neolamprologus_brichardi
ENSDARG00000020841	rbm7	99	42.029	ENSNLEG00000029494	-	98	43.173	Nomascus_leucogenys
ENSDARG00000020841	rbm7	99	39.560	ENSMEUG00000006187	-	99	39.781	Notamacropus_eugenii
ENSDARG00000020841	rbm7	59	54.605	ENSOPRG00000011060	-	98	42.963	Ochotona_princeps
ENSDARG00000020841	rbm7	99	40.000	ENSODEG00000016844	-	97	39.382	Octodon_degus
ENSDARG00000020841	rbm7	99	36.187	ENSODEG00000000186	-	96	35.714	Octodon_degus
ENSDARG00000020841	rbm7	57	56.944	ENSODEG00000010164	-	97	59.864	Octodon_degus
ENSDARG00000020841	rbm7	81	49.296	ENSONIG00000005369	rbm7	100	44.203	Oreochromis_niloticus
ENSDARG00000020841	rbm7	98	44.286	ENSOANG00000001755	-	91	43.590	Ornithorhynchus_anatinus
ENSDARG00000020841	rbm7	99	40.590	ENSOCUG00000003342	-	98	43.542	Oryctolagus_cuniculus
ENSDARG00000020841	rbm7	96	44.280	ENSORLG00000028880	rbm7	99	46.591	Oryzias_latipes
ENSDARG00000020841	rbm7	96	45.693	ENSORLG00020010841	rbm7	99	46.442	Oryzias_latipes_hni
ENSDARG00000020841	rbm7	63	57.862	ENSORLG00015000536	rbm7	99	47.547	Oryzias_latipes_hsok
ENSDARG00000020841	rbm7	56	54.930	ENSOMEG00000000117	rbm7	97	44.813	Oryzias_melastigma
ENSDARG00000020841	rbm7	99	40.959	ENSOGAG00000016857	-	98	42.007	Otolemur_garnettii
ENSDARG00000020841	rbm7	99	42.910	ENSOARG00000000924	-	97	44.280	Ovis_aries
ENSDARG00000020841	rbm7	99	40.925	ENSPPAG00000027572	-	98	43.173	Pan_paniscus
ENSDARG00000020841	rbm7	62	45.513	ENSPPRG00000002935	RBM11	59	46.939	Panthera_pardus
ENSDARG00000020841	rbm7	99	43.911	ENSPPRG00000004372	-	98	42.751	Panthera_pardus
ENSDARG00000020841	rbm7	99	43.911	ENSPTIG00000013512	-	98	42.751	Panthera_tigris_altaica
ENSDARG00000020841	rbm7	62	46.154	ENSPTIG00000016278	RBM11	59	47.619	Panthera_tigris_altaica
ENSDARG00000020841	rbm7	99	40.925	ENSPTRG00000004305	RBM7	98	43.173	Pan_troglodytes
ENSDARG00000020841	rbm7	95	39.695	ENSPTRG00000049329	-	96	38.697	Pan_troglodytes
ENSDARG00000020841	rbm7	98	42.804	ENSPANG00000009431	-	97	42.537	Papio_anubis
ENSDARG00000020841	rbm7	100	60.300	ENSPKIG00000016648	rbm7	100	59.176	Paramormyrops_kingsleyae
ENSDARG00000020841	rbm7	96	48.016	ENSPMGG00000001523	rbm7	96	60.000	Periophthalmus_magnuspinnatus
ENSDARG00000020841	rbm7	50	48.819	ENSPEMG00000016731	Rbm11	51	48.819	Peromyscus_maniculatus_bairdii
ENSDARG00000020841	rbm7	94	42.248	ENSPEMG00000011553	-	59	55.556	Peromyscus_maniculatus_bairdii
ENSDARG00000020841	rbm7	96	45.055	ENSPCIG00000011225	-	82	45.390	Phascolarctos_cinereus
ENSDARG00000020841	rbm7	98	49.020	ENSPFOG00000002193	rbm7	92	47.843	Poecilia_formosa
ENSDARG00000020841	rbm7	98	49.412	ENSPLAG00000010517	rbm7	92	48.235	Poecilia_latipinna
ENSDARG00000020841	rbm7	98	49.606	ENSPMEG00000003603	rbm7	92	49.606	Poecilia_mexicana
ENSDARG00000020841	rbm7	98	50.196	ENSPREG00000015610	rbm7	92	50.196	Poecilia_reticulata
ENSDARG00000020841	rbm7	99	40.426	ENSPPYG00000003894	-	98	43.542	Pongo_abelii
ENSDARG00000020841	rbm7	98	41.264	ENSPVAG00000005294	-	97	43.494	Pteropus_vampyrus
ENSDARG00000020841	rbm7	81	51.196	ENSPNYG00000012084	rbm7	100	45.387	Pundamilia_nyererei
ENSDARG00000020841	rbm7	100	71.103	ENSPNAG00000012813	rbm7	100	71.698	Pygocentrus_nattereri
ENSDARG00000020841	rbm7	85	36.866	ENSRNOG00000029147	Rbm11	91	36.481	Rattus_norvegicus
ENSDARG00000020841	rbm7	99	41.455	ENSRBIG00000044762	-	98	42.593	Rhinopithecus_bieti
ENSDARG00000020841	rbm7	99	42.125	ENSRROG00000032280	-	98	42.593	Rhinopithecus_roxellana
ENSDARG00000020841	rbm7	99	41.392	ENSSBOG00000027830	-	98	42.424	Saimiri_boliviensis_boliviensis
ENSDARG00000020841	rbm7	99	45.907	ENSSHAG00000008426	-	99	45.745	Sarcophilus_harrisii
ENSDARG00000020841	rbm7	100	56.015	ENSSFOG00015008458	rbm7	100	56.716	Scleropages_formosus
ENSDARG00000020841	rbm7	100	46.691	ENSSMAG00000003040	rbm7	100	47.794	Scophthalmus_maximus
ENSDARG00000020841	rbm7	100	46.886	ENSSDUG00000005361	rbm7	100	48.352	Seriola_dumerili
ENSDARG00000020841	rbm7	100	46.886	ENSSLDG00000003221	rbm7	100	48.352	Seriola_lalandi_dorsalis
ENSDARG00000020841	rbm7	96	48.699	ENSSPAG00000019320	rbm7	100	49.064	Stegastes_partitus
ENSDARG00000020841	rbm7	99	42.857	ENSSSCG00000027905	-	98	43.123	Sus_scrofa
ENSDARG00000020841	rbm7	58	51.974	ENSTGUG00000000117	-	50	52.667	Taeniopygia_guttata
ENSDARG00000020841	rbm7	100	41.697	ENSTRUG00000020355	rbm7	100	41.697	Takifugu_rubripes
ENSDARG00000020841	rbm7	99	41.455	ENSTTRG00000001515	-	98	42.279	Tursiops_truncatus
ENSDARG00000020841	rbm7	99	43.657	ENSUAMG00000019095	-	98	43.071	Ursus_americanus
ENSDARG00000020841	rbm7	99	43.657	ENSUMAG00000003774	-	98	43.071	Ursus_maritimus
ENSDARG00000020841	rbm7	99	43.750	ENSVPAG00000006300	-	98	44.649	Vicugna_pacos
ENSDARG00000020841	rbm7	60	59.119	ENSXETG00000012654	rbm7	63	58.861	Xenopus_tropicalis
ENSDARG00000020841	rbm7	100	49.265	ENSXMAG00000000970	rbm7	100	49.265	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0007409	axonogenesis	27193168.	IMP	Process
GO:0021693	cerebellar Purkinje cell layer structural organization	27193168.	IMP	Process