EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000020850 (Gene tree)
Gene ID: 30516
Gene Symbol: eef1a1l1
Alias: fi48f03|wu:fi48f03|zgc:109885
Full Name: eukaryotic translation elongation factor 1 alpha 1%2C like 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 18727 bases
Position: chr19:43119014-43137740
Accession: ZDB-GENE-990415-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131316	GTP_EFTU	PF00009.27	3.8e-54	1	1
ENSDARP00000148761	GTP_EFTU	PF00009.27	4.3e-53	1	1
ENSDARP00000156411	GTP_EFTU	PF00009.27	4.3e-53	1	1
ENSDARP00000006339	GTP_EFTU	PF00009.27	4.3e-53	1	1
ENSDARP00000148761	GTP_EFTU_D2	PF03144.25	2e-15	1	1
ENSDARP00000131316	GTP_EFTU_D2	PF03144.25	2.3e-15	1	1
ENSDARP00000156411	GTP_EFTU_D2	PF03144.25	2.8e-15	1	1
ENSDARP00000006339	GTP_EFTU_D2	PF03144.25	3e-15	1	1
ENSDARP00000006339	GTP_EFTU_D3	PF03143.17	1.6e-40	1	1
ENSDARP00000156411	GTP_EFTU_D3	PF03143.17	1.4e-39	1	1
ENSDARP00000148761	GTP_EFTU_D3	PF03143.17	8.2e-39	1	1
ENSDARP00000131316	GTP_EFTU_D3	PF03143.17	8.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000167847	-	4216	-	ENSDARP00000131316	462 (aa)	-	A0A0R4IE10
ENSDART00000186962	-	4455	-	ENSDARP00000148761	462 (aa)	-	A0A2R8Q469
ENSDART00000023156	-	1745	-	ENSDARP00000006339	462 (aa)	-	Q92005
ENSDART00000187305	-	4455	-	ENSDARP00000156411	462 (aa)	-	A0A2R8QSR4

Gene Model

Click here to download ENSDARG00000020850's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000020850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000020850	eef1a1l1	100	90.909	ENSDARG00000069951	eef1a1b	100	90.909
ENSDARG00000020850	eef1a1l1	100	69.264	ENSDARG00000071727	si:dkey-37o8.1	95	69.264
ENSDARG00000020850	eef1a1l1	95	38.688	ENSDARG00000098627	gspt1l	74	38.688
ENSDARG00000020850	eef1a1l1	99	88.937	ENSDARG00000006838	eef1a2	99	88.937
ENSDARG00000020850	eef1a1l1	95	41.591	ENSDARG00000036778	hbs1l	65	41.230
ENSDARG00000020850	eef1a1l1	95	37.955	ENSDARG00000031048	gspt1	76	38.009
ENSDARG00000020850	eef1a1l1	100	91.991	ENSDARG00000039502	eef1a1a	100	94.686

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000020850	eef1a1l1	67	91.234	ENSAPOG00000004757	eef1a1l1	100	100.000	Acanthochromis_polyacanthus
ENSDARG00000020850	eef1a1l1	99	79.348	ENSAMEG00000004317	-	99	79.348	Ailuropoda_melanoleuca
ENSDARG00000020850	eef1a1l1	99	86.304	ENSAMEG00000009677	-	99	86.304	Ailuropoda_melanoleuca
ENSDARG00000020850	eef1a1l1	99	87.174	ENSCAFG00000013249	-	99	87.174	Canis_familiaris
ENSDARG00000020850	eef1a1l1	99	87.174	ENSCAFG00020020007	-	99	87.174	Canis_lupus_dingo
ENSDARG00000020850	eef1a1l1	99	89.565	ENSCPBG00000000646	-	99	89.565	Chrysemys_picta_bellii
ENSDARG00000020850	eef1a1l1	99	91.304	ENSCPBG00000000748	-	99	91.304	Chrysemys_picta_bellii
ENSDARG00000020850	eef1a1l1	99	89.278	ENSEASG00005012365	-	96	90.284	Equus_asinus_asinus
ENSDARG00000020850	eef1a1l1	85	83.969	ENSEASG00005018013	-	99	83.969	Equus_asinus_asinus
ENSDARG00000020850	eef1a1l1	99	87.609	ENSECAG00000022260	-	99	87.609	Equus_caballus
ENSDARG00000020850	eef1a1l1	99	93.913	ENSELUG00000023536	eef1a1l1	100	93.723	Esox_lucius
ENSDARG00000020850	eef1a1l1	99	89.565	ENSFCAG00000030530	-	99	89.565	Felis_catus
ENSDARG00000020850	eef1a1l1	99	90.870	ENSGAGG00000000642	-	99	90.870	Gopherus_agassizii
ENSDARG00000020850	eef1a1l1	99	89.348	ENSGAGG00000000648	-	99	89.348	Gopherus_agassizii
ENSDARG00000020850	eef1a1l1	90	93.237	ENSLBEG00000002790	eef1a1l1	100	93.237	Labrus_bergylta
ENSDARG00000020850	eef1a1l1	99	88.261	ENSLAFG00000028081	-	99	88.261	Loxodonta_africana
ENSDARG00000020850	eef1a1l1	99	89.130	ENSLAFG00000025161	-	99	89.130	Loxodonta_africana
ENSDARG00000020850	eef1a1l1	74	91.908	ENSOANG00000012066	-	100	91.908	Ornithorhynchus_anatinus
ENSDARG00000020850	eef1a1l1	90	93.478	ENSOMEG00000006888	-	100	93.478	Oryzias_melastigma
ENSDARG00000020850	eef1a1l1	99	88.478	ENSOARG00000002943	-	99	88.478	Ovis_aries
ENSDARG00000020850	eef1a1l1	98	89.135	ENSPPRG00000005678	-	97	89.135	Panthera_pardus
ENSDARG00000020850	eef1a1l1	99	84.783	ENSPPRG00000008525	-	99	84.783	Panthera_pardus
ENSDARG00000020850	eef1a1l1	99	86.957	ENSPTIG00000006939	-	99	86.957	Panthera_tigris_altaica
ENSDARG00000020850	eef1a1l1	99	89.130	ENSPSIG00000008610	-	99	89.130	Pelodiscus_sinensis
ENSDARG00000020850	eef1a1l1	65	99.074	ENSPVAG00000007682	-	64	99.074	Pteropus_vampyrus
ENSDARG00000020850	eef1a1l1	99	84.061	ENSSMAG00000018455	-	99	84.061	Scophthalmus_maximus
ENSDARG00000020850	eef1a1l1	99	89.348	ENSSPUG00000003655	-	99	89.348	Sphenodon_punctatus
ENSDARG00000020850	eef1a1l1	99	89.130	ENSSSCG00000034113	-	99	89.130	Sus_scrofa
ENSDARG00000020850	eef1a1l1	98	82.743	ENSSSCG00000038035	-	99	82.609	Sus_scrofa
ENSDARG00000020850	eef1a1l1	99	77.391	ENSUAMG00000007676	-	99	77.391	Ursus_americanus
ENSDARG00000020850	eef1a1l1	99	84.565	ENSUAMG00000008928	-	99	84.565	Ursus_americanus
ENSDARG00000020850	eef1a1l1	51	85.106	ENSUAMG00000006085	-	98	85.106	Ursus_americanus
ENSDARG00000020850	eef1a1l1	99	86.304	ENSUMAG00000013211	-	99	86.304	Ursus_maritimus
ENSDARG00000020850	eef1a1l1	99	86.957	ENSVVUG00000026886	-	99	86.957	Vulpes_vulpes
ENSDARG00000020850	eef1a1l1	99	91.522	ENSXETG00000022604	eef1a1o	99	91.522	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	IEA	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0006412	translation	-	IEA	Process
GO:0006414	translational elongation	21873635.	IBA	Process
GO:0006414	translational elongation	-	IEA	Process