EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000020913 (Gene tree)
Gene ID: 445399
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 56
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 19359 bases
Position: chr10:2856377-2875735
Accession: ZDB-GENE-040825-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000035846	ResIII	PF04851.15	5.8e-09	1	1
ENSDARP00000035846	DEAD	PF00270.29	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135708	-	567	-	-	- (aa)	-	-
ENSDART00000034555	-	1993	-	ENSDARP00000035846	557 (aa)	-	Q6DRE7
ENSDART00000137180	-	1606	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000020913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000020913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000020913	ddx56	71	32.584	ENSDARG00000104708	ddx24	63	32.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000020913	ddx56	98	64.364	ENSG00000136271	DDX56	99	65.574	Homo_sapiens
ENSDARG00000020913	ddx56	99	80.714	ENSAPOG00000017113	ddx56	99	80.536	Acanthochromis_polyacanthus
ENSDARG00000020913	ddx56	98	63.702	ENSAMEG00000017711	DDX56	98	63.158	Ailuropoda_melanoleuca
ENSDARG00000020913	ddx56	95	69.346	ENSACIG00000013747	ddx56	99	78.689	Amphilophus_citrinellus
ENSDARG00000020913	ddx56	87	83.778	ENSAOCG00000015447	-	87	83.778	Amphiprion_ocellaris
ENSDARG00000020913	ddx56	89	83.400	ENSAOCG00000018059	ddx56	94	83.101	Amphiprion_ocellaris
ENSDARG00000020913	ddx56	99	80.287	ENSAPEG00000007267	ddx56	99	79.928	Amphiprion_percula
ENSDARG00000020913	ddx56	99	79.892	ENSATEG00000005279	ddx56	99	79.713	Anabas_testudineus
ENSDARG00000020913	ddx56	99	78.058	ENSACLG00000020113	ddx56	99	77.698	Astatotilapia_calliptera
ENSDARG00000020913	ddx56	99	76.744	ENSAMXG00000019357	ddx56	99	77.117	Astyanax_mexicanus
ENSDARG00000020913	ddx56	99	65.162	ENSBTAG00000010602	DDX56	98	64.079	Bos_taurus
ENSDARG00000020913	ddx56	96	40.360	WBGene00016073	C24H12.4	86	39.602	Caenorhabditis_elegans
ENSDARG00000020913	ddx56	98	64.909	ENSCJAG00000012233	DDX56	98	63.818	Callithrix_jacchus
ENSDARG00000020913	ddx56	81	63.355	ENSCAFG00000029295	DDX56	98	63.135	Canis_familiaris
ENSDARG00000020913	ddx56	98	62.432	ENSCAFG00020019695	DDX56	99	63.604	Canis_lupus_dingo
ENSDARG00000020913	ddx56	99	65.225	ENSCHIG00000014261	DDX56	98	63.784	Capra_hircus
ENSDARG00000020913	ddx56	98	64.000	ENSTSYG00000008048	DDX56	98	63.818	Carlito_syrichta
ENSDARG00000020913	ddx56	85	64.211	ENSCAPG00000006286	DDX56	98	62.947	Cavia_aperea
ENSDARG00000020913	ddx56	98	65.455	ENSCPOG00000003359	DDX56	98	64.364	Cavia_porcellus
ENSDARG00000020913	ddx56	98	63.455	ENSCCAG00000025303	DDX56	98	63.818	Cebus_capucinus
ENSDARG00000020913	ddx56	98	64.312	ENSCATG00000039389	DDX56	98	63.225	Cercocebus_atys
ENSDARG00000020913	ddx56	98	65.876	ENSCLAG00000007666	DDX56	98	64.964	Chinchilla_lanigera
ENSDARG00000020913	ddx56	98	64.674	ENSCSAG00000015636	DDX56	99	63.587	Chlorocebus_sabaeus
ENSDARG00000020913	ddx56	97	69.358	ENSCPBG00000024556	DDX56	97	69.358	Chrysemys_picta_bellii
ENSDARG00000020913	ddx56	90	60.314	ENSCING00000005185	-	98	60.314	Ciona_intestinalis
ENSDARG00000020913	ddx56	89	58.084	ENSCSAVG00000011266	-	99	58.084	Ciona_savignyi
ENSDARG00000020913	ddx56	98	64.182	ENSCANG00000028187	DDX56	98	63.091	Colobus_angolensis_palliatus
ENSDARG00000020913	ddx56	98	64.545	ENSCGRG00001019019	Ddx56	98	63.455	Cricetulus_griseus_chok1gshd
ENSDARG00000020913	ddx56	98	64.545	ENSCGRG00000011870	Ddx56	98	63.455	Cricetulus_griseus_crigri
ENSDARG00000020913	ddx56	99	78.036	ENSCSEG00000008368	ddx56	99	77.321	Cynoglossus_semilaevis
ENSDARG00000020913	ddx56	99	78.853	ENSCVAG00000006499	ddx56	99	79.032	Cyprinodon_variegatus
ENSDARG00000020913	ddx56	85	62.395	ENSDNOG00000036526	DDX56	97	61.345	Dasypus_novemcinctus
ENSDARG00000020913	ddx56	91	51.953	FBgn0001565	Hlc	90	51.562	Drosophila_melanogaster
ENSDARG00000020913	ddx56	64	73.611	ENSETEG00000002969	-	64	73.611	Echinops_telfairi
ENSDARG00000020913	ddx56	85	45.094	ENSETEG00000019559	-	99	44.351	Echinops_telfairi
ENSDARG00000020913	ddx56	98	63.521	ENSEBUG00000009986	ddx56	99	63.339	Eptatretus_burgeri
ENSDARG00000020913	ddx56	98	64.065	ENSEASG00005017795	DDX56	98	63.521	Equus_asinus_asinus
ENSDARG00000020913	ddx56	98	63.884	ENSECAG00000019897	DDX56	98	63.339	Equus_caballus
ENSDARG00000020913	ddx56	86	63.071	ENSEEUG00000004849	DDX56	99	62.033	Erinaceus_europaeus
ENSDARG00000020913	ddx56	99	80.072	ENSELUG00000004150	ddx56	99	79.892	Esox_lucius
ENSDARG00000020913	ddx56	97	64.954	ENSFCAG00000010261	DDX56	97	63.853	Felis_catus
ENSDARG00000020913	ddx56	98	65.876	ENSFDAG00000007128	DDX56	98	64.781	Fukomys_damarensis
ENSDARG00000020913	ddx56	99	77.338	ENSFHEG00000018008	ddx56	96	82.731	Fundulus_heteroclitus
ENSDARG00000020913	ddx56	99	74.414	ENSGAFG00000006906	ddx56	99	74.414	Gambusia_affinis
ENSDARG00000020913	ddx56	93	70.857	ENSGAGG00000006789	DDX56	93	70.611	Gopherus_agassizii
ENSDARG00000020913	ddx56	98	64.364	ENSGGOG00000012031	DDX56	98	63.273	Gorilla_gorilla
ENSDARG00000020913	ddx56	96	73.134	ENSHBUG00000015246	ddx56	97	72.761	Haplochromis_burtoni
ENSDARG00000020913	ddx56	98	64.964	ENSHGLG00000017271	DDX56	98	63.869	Heterocephalus_glaber_female
ENSDARG00000020913	ddx56	98	64.964	ENSHGLG00100015731	DDX56	98	63.869	Heterocephalus_glaber_male
ENSDARG00000020913	ddx56	99	75.090	ENSHCOG00000001685	ddx56	99	75.090	Hippocampus_comes
ENSDARG00000020913	ddx56	99	78.853	ENSIPUG00000006602	ddx56	98	78.853	Ictalurus_punctatus
ENSDARG00000020913	ddx56	99	65.704	ENSSTOG00000000464	DDX56	98	64.440	Ictidomys_tridecemlineatus
ENSDARG00000020913	ddx56	98	64.545	ENSJJAG00000014269	Ddx56	99	63.636	Jaculus_jaculus
ENSDARG00000020913	ddx56	99	78.315	ENSKMAG00000016611	ddx56	99	78.315	Kryptolebias_marmoratus
ENSDARG00000020913	ddx56	98	80.505	ENSLBEG00000026281	ddx56	99	79.603	Labrus_bergylta
ENSDARG00000020913	ddx56	99	70.758	ENSLACG00000015551	DDX56	98	70.251	Latimeria_chalumnae
ENSDARG00000020913	ddx56	100	76.014	ENSLOCG00000015185	ddx56	99	76.732	Lepisosteus_oculatus
ENSDARG00000020913	ddx56	99	64.273	ENSLAFG00000018206	DDX56	99	63.196	Loxodonta_africana
ENSDARG00000020913	ddx56	98	64.312	ENSMFAG00000041001	DDX56	98	63.225	Macaca_fascicularis
ENSDARG00000020913	ddx56	98	64.493	ENSMMUG00000002645	DDX56	98	63.406	Macaca_mulatta
ENSDARG00000020913	ddx56	98	64.312	ENSMNEG00000028492	DDX56	98	63.225	Macaca_nemestrina
ENSDARG00000020913	ddx56	98	64.493	ENSMLEG00000043591	DDX56	98	63.406	Mandrillus_leucophaeus
ENSDARG00000020913	ddx56	98	80.218	ENSMAMG00000007776	ddx56	98	80.581	Mastacembelus_armatus
ENSDARG00000020913	ddx56	99	78.058	ENSMZEG00005009813	ddx56	99	77.698	Maylandia_zebra
ENSDARG00000020913	ddx56	99	65.099	ENSMICG00000005550	DDX56	98	64.014	Microcebus_murinus
ENSDARG00000020913	ddx56	99	64.057	ENSMOCG00000016782	Ddx56	99	62.970	Microtus_ochrogaster
ENSDARG00000020913	ddx56	89	82.669	ENSMMOG00000009654	ddx56	95	82.869	Mola_mola
ENSDARG00000020913	ddx56	97	60.401	ENSMODG00000016137	DDX56	96	59.266	Monodelphis_domestica
ENSDARG00000020913	ddx56	68	73.822	ENSMALG00000016910	ddx56	99	73.822	Monopterus_albus
ENSDARG00000020913	ddx56	99	63.327	MGP_CAROLIEiJ_G0016069	Ddx56	99	64.940	Mus_caroli
ENSDARG00000020913	ddx56	99	63.148	ENSMUSG00000004393	Ddx56	99	64.542	Mus_musculus
ENSDARG00000020913	ddx56	99	62.612	MGP_PahariEiJ_G0016822	Ddx56	99	64.400	Mus_pahari
ENSDARG00000020913	ddx56	99	63.148	MGP_SPRETEiJ_G0016911	Ddx56	99	64.542	Mus_spretus
ENSDARG00000020913	ddx56	98	64.738	ENSMPUG00000018196	DDX56	86	63.455	Mustela_putorius_furo
ENSDARG00000020913	ddx56	99	63.899	ENSMLUG00000003509	DDX56	98	62.996	Myotis_lucifugus
ENSDARG00000020913	ddx56	98	65.761	ENSNGAG00000018785	Ddx56	99	64.855	Nannospalax_galili
ENSDARG00000020913	ddx56	97	73.346	ENSNBRG00000002656	ddx56	98	73.346	Neolamprologus_brichardi
ENSDARG00000020913	ddx56	98	64.909	ENSNLEG00000003816	DDX56	98	63.818	Nomascus_leucogenys
ENSDARG00000020913	ddx56	88	61.972	ENSMEUG00000006788	DDX56	98	60.729	Notamacropus_eugenii
ENSDARG00000020913	ddx56	98	63.818	ENSOPRG00000000292	-	98	62.703	Ochotona_princeps
ENSDARG00000020913	ddx56	67	68.435	ENSODEG00000014807	DDX56	99	66.844	Octodon_degus
ENSDARG00000020913	ddx56	99	76.130	ENSONIG00000011509	ddx56	99	76.130	Oreochromis_niloticus
ENSDARG00000020913	ddx56	97	56.330	ENSOANG00000006320	-	99	55.780	Ornithorhynchus_anatinus
ENSDARG00000020913	ddx56	73	56.829	ENSOANG00000015987	-	95	56.829	Ornithorhynchus_anatinus
ENSDARG00000020913	ddx56	98	63.914	ENSOCUG00000022918	DDX56	98	63.818	Oryctolagus_cuniculus
ENSDARG00000020913	ddx56	99	79.032	ENSORLG00000001434	ddx56	99	78.853	Oryzias_latipes
ENSDARG00000020913	ddx56	99	78.674	ENSORLG00020015718	ddx56	96	78.495	Oryzias_latipes_hni
ENSDARG00000020913	ddx56	99	79.032	ENSORLG00015003004	ddx56	96	78.853	Oryzias_latipes_hsok
ENSDARG00000020913	ddx56	99	78.674	ENSOMEG00000022072	ddx56	99	78.495	Oryzias_melastigma
ENSDARG00000020913	ddx56	99	64.557	ENSOGAG00000009981	DDX56	98	64.195	Otolemur_garnettii
ENSDARG00000020913	ddx56	99	65.704	ENSOARG00000015240	DDX56	99	64.224	Ovis_aries
ENSDARG00000020913	ddx56	94	55.744	ENSPPAG00000031263	-	95	55.179	Pan_paniscus
ENSDARG00000020913	ddx56	98	61.717	ENSPPAG00000029147	DDX56	98	60.644	Pan_paniscus
ENSDARG00000020913	ddx56	97	64.771	ENSPPRG00000014594	DDX56	97	64.954	Panthera_pardus
ENSDARG00000020913	ddx56	95	58.083	ENSPTIG00000019500	DDX56	98	54.699	Panthera_tigris_altaica
ENSDARG00000020913	ddx56	98	64.364	ENSPTRG00000019147	DDX56	98	63.273	Pan_troglodytes
ENSDARG00000020913	ddx56	92	54.111	ENSPTRG00000052765	-	98	54.493	Pan_troglodytes
ENSDARG00000020913	ddx56	98	64.130	ENSPANG00000002446	DDX56	98	63.043	Papio_anubis
ENSDARG00000020913	ddx56	99	77.184	ENSPKIG00000018998	ddx56	99	76.250	Paramormyrops_kingsleyae
ENSDARG00000020913	ddx56	95	80.038	ENSPMGG00000017421	ddx56	99	79.284	Periophthalmus_magnuspinnatus
ENSDARG00000020913	ddx56	97	66.360	ENSPCIG00000009336	DDX56	97	65.441	Phascolarctos_cinereus
ENSDARG00000020913	ddx56	99	80.036	ENSPFOG00000018658	ddx56	99	79.856	Poecilia_formosa
ENSDARG00000020913	ddx56	99	80.216	ENSPLAG00000019208	ddx56	99	80.036	Poecilia_latipinna
ENSDARG00000020913	ddx56	99	80.036	ENSPMEG00000001775	ddx56	99	79.856	Poecilia_mexicana
ENSDARG00000020913	ddx56	99	80.576	ENSPREG00000015142	ddx56	99	80.396	Poecilia_reticulata
ENSDARG00000020913	ddx56	98	64.545	ENSPPYG00000017591	DDX56	98	63.455	Pongo_abelii
ENSDARG00000020913	ddx56	96	65.799	ENSPCAG00000011499	DDX56	98	64.498	Procavia_capensis
ENSDARG00000020913	ddx56	99	64.452	ENSPCOG00000024864	DDX56	99	63.375	Propithecus_coquereli
ENSDARG00000020913	ddx56	86	71.014	ENSPVAG00000000791	DDX56	86	71.014	Pteropus_vampyrus
ENSDARG00000020913	ddx56	99	77.878	ENSPNYG00000019212	ddx56	99	77.518	Pundamilia_nyererei
ENSDARG00000020913	ddx56	98	81.588	ENSPNAG00000025446	ddx56	99	81.047	Pygocentrus_nattereri
ENSDARG00000020913	ddx56	99	63.148	ENSRNOG00000004670	Ddx56	99	61.896	Rattus_norvegicus
ENSDARG00000020913	ddx56	98	64.364	ENSRBIG00000030140	DDX56	98	63.273	Rhinopithecus_bieti
ENSDARG00000020913	ddx56	98	64.416	ENSRROG00000044428	DDX56	98	63.321	Rhinopithecus_roxellana
ENSDARG00000020913	ddx56	97	43.973	YLR276C	-	98	44.048	Saccharomyces_cerevisiae
ENSDARG00000020913	ddx56	98	64.727	ENSSBOG00000034339	DDX56	98	63.636	Saimiri_boliviensis_boliviensis
ENSDARG00000020913	ddx56	85	65.690	ENSSHAG00000016615	DDX56	97	64.421	Sarcophilus_harrisii
ENSDARG00000020913	ddx56	99	77.500	ENSSFOG00015012795	ddx56	99	77.321	Scleropages_formosus
ENSDARG00000020913	ddx56	99	78.648	ENSSMAG00000011280	ddx56	99	80.597	Scophthalmus_maximus
ENSDARG00000020913	ddx56	99	79.857	ENSSDUG00000023597	ddx56	99	80.036	Seriola_dumerili
ENSDARG00000020913	ddx56	99	79.501	ENSSLDG00000018369	ddx56	99	79.679	Seriola_lalandi_dorsalis
ENSDARG00000020913	ddx56	69	73.333	ENSSARG00000014363	DDX56	78	70.423	Sorex_araneus
ENSDARG00000020913	ddx56	99	68.393	ENSSPUG00000000784	DDX56	97	68.393	Sphenodon_punctatus
ENSDARG00000020913	ddx56	95	80.712	ENSSPAG00000009392	ddx56	99	80.524	Stegastes_partitus
ENSDARG00000020913	ddx56	99	64.376	ENSSSCG00000016745	DDX56	98	63.834	Sus_scrofa
ENSDARG00000020913	ddx56	99	77.562	ENSTRUG00000018623	ddx56	99	77.975	Takifugu_rubripes
ENSDARG00000020913	ddx56	99	78.131	ENSTNIG00000013593	ddx56	99	77.778	Tetraodon_nigroviridis
ENSDARG00000020913	ddx56	98	64.000	ENSTBEG00000007119	DDX56	98	62.909	Tupaia_belangeri
ENSDARG00000020913	ddx56	86	63.257	ENSTTRG00000010552	DDX56	99	62.839	Tursiops_truncatus
ENSDARG00000020913	ddx56	98	63.818	ENSUAMG00000014194	DDX56	98	63.455	Ursus_americanus
ENSDARG00000020913	ddx56	98	63.818	ENSUMAG00000009666	DDX56	98	63.455	Ursus_maritimus
ENSDARG00000020913	ddx56	98	63.884	ENSVVUG00000011905	DDX56	98	64.610	Vulpes_vulpes
ENSDARG00000020913	ddx56	99	71.993	ENSXETG00000019000	ddx56	99	72.364	Xenopus_tropicalis
ENSDARG00000020913	ddx56	99	77.076	ENSXCOG00000017413	ddx56	99	77.076	Xiphophorus_couchianus
ENSDARG00000020913	ddx56	99	80.541	ENSXMAG00000018749	ddx56	99	80.360	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function