EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000021112 (Gene tree)
Gene ID: 474329
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7900 bases
Position: chr13:4656504-4664403
Accession: ZDB-GENE-041024-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000020042	Sas10_Utp3	PF04000.15	5.4e-20	1	1
ENSDARP00000143735	Sas10_Utp3	PF04000.15	5.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000177957	-	1734	-	ENSDARP00000143735	148 (aa)	-	F1QNQ8
ENSDART00000023803	-	2525	XM_021480568	ENSDARP00000020042	148 (aa)	XP_021336243	F1QNQ8

Gene Model

Click here to download ENSDARG00000021112's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000021112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000021112	c1d	95	60.284	ENSG00000197223	C1D	87	65.041	Homo_sapiens
ENSDARG00000021112	c1d	95	63.121	ENSAPOG00000005466	c1d	83	66.667	Acanthochromis_polyacanthus
ENSDARG00000021112	c1d	97	59.722	ENSAMEG00000004859	C1D	84	65.041	Ailuropoda_melanoleuca
ENSDARG00000021112	c1d	90	66.917	ENSACIG00000012684	c1d	80	68.293	Amphilophus_citrinellus
ENSDARG00000021112	c1d	89	65.909	ENSAOCG00000020354	c1d	79	68.966	Amphiprion_ocellaris
ENSDARG00000021112	c1d	86	66.929	ENSAPEG00000001403	c1d	75	68.966	Amphiprion_percula
ENSDARG00000021112	c1d	91	66.418	ENSATEG00000012922	c1d	79	70.732	Anabas_testudineus
ENSDARG00000021112	c1d	97	64.583	ENSAPLG00000009320	C1D	83	71.074	Anas_platyrhynchos
ENSDARG00000021112	c1d	79	70.940	ENSACAG00000001337	C1D	95	71.552	Anolis_carolinensis
ENSDARG00000021112	c1d	95	59.574	ENSANAG00000005773	-	87	64.228	Aotus_nancymaae
ENSDARG00000021112	c1d	95	60.993	ENSANAG00000035972	-	87	65.854	Aotus_nancymaae
ENSDARG00000021112	c1d	82	64.754	ENSACLG00000026206	c1d	81	64.754	Astatotilapia_calliptera
ENSDARG00000021112	c1d	98	65.517	ENSAMXG00000043212	c1d	99	65.517	Astyanax_mexicanus
ENSDARG00000021112	c1d	95	60.284	ENSBTAG00000049002	C1D	87	65.041	Bos_taurus
ENSDARG00000021112	c1d	95	60.284	ENSCJAG00000006589	C1D	81	65.041	Callithrix_jacchus
ENSDARG00000021112	c1d	75	58.559	ENSCJAG00000044668	-	87	58.559	Callithrix_jacchus
ENSDARG00000021112	c1d	95	60.993	ENSCAFG00000030099	C1D	87	65.854	Canis_familiaris
ENSDARG00000021112	c1d	95	60.993	ENSCAFG00020026997	C1D	87	65.854	Canis_lupus_dingo
ENSDARG00000021112	c1d	95	60.284	ENSCHIG00000025729	C1D	87	65.041	Capra_hircus
ENSDARG00000021112	c1d	95	59.574	ENSTSYG00000035739	-	87	65.041	Carlito_syrichta
ENSDARG00000021112	c1d	99	52.381	ENSTSYG00000026573	-	75	59.829	Carlito_syrichta
ENSDARG00000021112	c1d	76	58.407	ENSCAPG00000011523	-	94	58.407	Cavia_aperea
ENSDARG00000021112	c1d	86	64.062	ENSCPOG00000037986	-	87	65.854	Cavia_porcellus
ENSDARG00000021112	c1d	76	58.407	ENSCPOG00000020112	-	94	58.407	Cavia_porcellus
ENSDARG00000021112	c1d	95	60.284	ENSCCAG00000030405	-	87	65.041	Cebus_capucinus
ENSDARG00000021112	c1d	95	59.574	ENSCATG00000045336	C1D	87	65.041	Cercocebus_atys
ENSDARG00000021112	c1d	95	58.865	ENSCATG00000043348	-	87	63.415	Cercocebus_atys
ENSDARG00000021112	c1d	86	63.281	ENSCLAG00000011883	C1D	87	65.041	Chinchilla_lanigera
ENSDARG00000021112	c1d	96	59.155	ENSCSAG00000014811	C1D	87	65.041	Chlorocebus_sabaeus
ENSDARG00000021112	c1d	95	60.284	ENSCHOG00000006719	C1D	69	65.041	Choloepus_hoffmanni
ENSDARG00000021112	c1d	82	68.033	ENSCPBG00000014451	C1D	82	68.595	Chrysemys_picta_bellii
ENSDARG00000021112	c1d	83	51.220	ENSCING00000020906	-	62	51.220	Ciona_intestinalis
ENSDARG00000021112	c1d	86	48.819	ENSCSAVG00000000150	-	67	49.153	Ciona_savignyi
ENSDARG00000021112	c1d	95	58.865	ENSCANG00000035564	C1D	87	64.228	Colobus_angolensis_palliatus
ENSDARG00000021112	c1d	83	56.911	ENSCANG00000036599	-	100	56.911	Colobus_angolensis_palliatus
ENSDARG00000021112	c1d	95	61.702	ENSCGRG00001023376	C1d	87	66.667	Cricetulus_griseus_chok1gshd
ENSDARG00000021112	c1d	95	61.702	ENSCGRG00000010245	C1d	87	66.667	Cricetulus_griseus_crigri
ENSDARG00000021112	c1d	98	60.690	ENSCSEG00000000587	c1d	86	66.667	Cynoglossus_semilaevis
ENSDARG00000021112	c1d	89	64.885	ENSCVAG00000004603	c1d	80	66.667	Cyprinodon_variegatus
ENSDARG00000021112	c1d	95	56.028	ENSDNOG00000046068	-	87	60.163	Dasypus_novemcinctus
ENSDARG00000021112	c1d	87	62.016	ENSDORG00000003300	C1d	87	63.415	Dipodomys_ordii
ENSDARG00000021112	c1d	55	74.390	ENSETEG00000014857	C1D	81	77.922	Echinops_telfairi
ENSDARG00000021112	c1d	80	52.941	ENSEBUG00000006874	c1d	72	55.263	Eptatretus_burgeri
ENSDARG00000021112	c1d	95	60.284	ENSEASG00005007307	C1D	80	65.041	Equus_asinus_asinus
ENSDARG00000021112	c1d	96	59.859	ENSECAG00000002187	C1D	88	65.041	Equus_caballus
ENSDARG00000021112	c1d	89	67.939	ENSELUG00000014823	c1d	84	71.545	Esox_lucius
ENSDARG00000021112	c1d	95	60.284	ENSFCAG00000028933	C1D	87	65.041	Felis_catus
ENSDARG00000021112	c1d	84	69.355	ENSFALG00000013640	C1D	73	71.074	Ficedula_albicollis
ENSDARG00000021112	c1d	86	52.713	ENSFDAG00000014175	-	85	54.032	Fukomys_damarensis
ENSDARG00000021112	c1d	86	63.281	ENSFDAG00000010462	-	87	65.041	Fukomys_damarensis
ENSDARG00000021112	c1d	95	62.411	ENSFHEG00000010545	c1d	85	67.480	Fundulus_heteroclitus
ENSDARG00000021112	c1d	83	61.789	ENSGMOG00000013911	-	94	62.185	Gadus_morhua
ENSDARG00000021112	c1d	85	69.048	ENSGALG00000008765	C1D	85	70.732	Gallus_gallus
ENSDARG00000021112	c1d	85	66.667	ENSGAFG00000012578	c1d	76	66.949	Gambusia_affinis
ENSDARG00000021112	c1d	86	69.531	ENSGACG00000011981	c1d	96	71.545	Gasterosteus_aculeatus
ENSDARG00000021112	c1d	82	68.033	ENSGAGG00000013383	C1D	82	68.595	Gopherus_agassizii
ENSDARG00000021112	c1d	95	58.156	ENSGGOG00000022296	-	87	62.602	Gorilla_gorilla
ENSDARG00000021112	c1d	91	59.259	ENSGGOG00000025808	-	67	64.103	Gorilla_gorilla
ENSDARG00000021112	c1d	95	60.284	ENSGGOG00000025982	-	68	65.041	Gorilla_gorilla
ENSDARG00000021112	c1d	81	66.667	ENSHBUG00000018531	c1d	71	67.797	Haplochromis_burtoni
ENSDARG00000021112	c1d	82	59.836	ENSHGLG00000021219	-	87	59.836	Heterocephalus_glaber_female
ENSDARG00000021112	c1d	86	64.844	ENSHGLG00000012332	-	87	66.667	Heterocephalus_glaber_female
ENSDARG00000021112	c1d	82	60.656	ENSHGLG00100019951	-	87	60.656	Heterocephalus_glaber_male
ENSDARG00000021112	c1d	86	64.844	ENSHGLG00100000221	-	87	66.667	Heterocephalus_glaber_male
ENSDARG00000021112	c1d	87	62.791	ENSHCOG00000014589	c1d	80	64.407	Hippocampus_comes
ENSDARG00000021112	c1d	87	62.791	ENSHCOG00000014568	C1D	80	64.407	Hippocampus_comes
ENSDARG00000021112	c1d	97	68.056	ENSIPUG00000018661	c1d	85	73.171	Ictalurus_punctatus
ENSDARG00000021112	c1d	96	60.563	ENSSTOG00000012346	C1D	87	65.854	Ictidomys_tridecemlineatus
ENSDARG00000021112	c1d	86	57.031	ENSJJAG00000016086	-	88	58.537	Jaculus_jaculus
ENSDARG00000021112	c1d	86	62.500	ENSJJAG00000009540	-	89	64.228	Jaculus_jaculus
ENSDARG00000021112	c1d	79	64.957	ENSJJAG00000023186	-	89	64.957	Jaculus_jaculus
ENSDARG00000021112	c1d	86	57.812	ENSJJAG00000005044	-	89	59.350	Jaculus_jaculus
ENSDARG00000021112	c1d	100	61.842	ENSKMAG00000015077	c1d	97	60.526	Kryptolebias_marmoratus
ENSDARG00000021112	c1d	97	62.238	ENSLBEG00000008351	c1d	79	67.480	Labrus_bergylta
ENSDARG00000021112	c1d	98	61.905	ENSLACG00000007516	C1D	83	70.161	Latimeria_chalumnae
ENSDARG00000021112	c1d	94	65.493	ENSLOCG00000016024	c1d	84	71.774	Lepisosteus_oculatus
ENSDARG00000021112	c1d	95	59.574	ENSLAFG00000002083	C1D	87	64.228	Loxodonta_africana
ENSDARG00000021112	c1d	95	59.574	ENSMFAG00000034261	C1D	87	65.041	Macaca_fascicularis
ENSDARG00000021112	c1d	95	58.865	ENSMFAG00000034034	-	87	63.415	Macaca_fascicularis
ENSDARG00000021112	c1d	95	58.156	ENSMFAG00000028681	-	87	63.415	Macaca_fascicularis
ENSDARG00000021112	c1d	95	58.865	ENSMMUG00000043184	-	87	63.415	Macaca_mulatta
ENSDARG00000021112	c1d	95	58.156	ENSMMUG00000017209	-	87	63.415	Macaca_mulatta
ENSDARG00000021112	c1d	95	59.574	ENSMMUG00000041557	C1D	88	65.041	Macaca_mulatta
ENSDARG00000021112	c1d	95	59.574	ENSMNEG00000040612	C1D	87	65.041	Macaca_nemestrina
ENSDARG00000021112	c1d	95	58.865	ENSMNEG00000020626	-	87	63.415	Macaca_nemestrina
ENSDARG00000021112	c1d	95	59.574	ENSMLEG00000027619	C1D	87	65.041	Mandrillus_leucophaeus
ENSDARG00000021112	c1d	95	58.865	ENSMLEG00000028412	-	87	63.415	Mandrillus_leucophaeus
ENSDARG00000021112	c1d	87	64.341	ENSMAMG00000022156	c1d	79	65.854	Mastacembelus_armatus
ENSDARG00000021112	c1d	80	67.797	ENSMZEG00005027343	c1d	81	67.797	Maylandia_zebra
ENSDARG00000021112	c1d	85	69.048	ENSMGAG00000004517	C1D	87	70.732	Meleagris_gallopavo
ENSDARG00000021112	c1d	95	61.702	ENSMAUG00000008974	C1d	87	66.667	Mesocricetus_auratus
ENSDARG00000021112	c1d	95	60.284	ENSMICG00000032141	C1D	87	65.041	Microcebus_murinus
ENSDARG00000021112	c1d	95	62.411	ENSMOCG00000010860	C1d	87	67.480	Microtus_ochrogaster
ENSDARG00000021112	c1d	95	62.143	ENSMMOG00000007332	c1d	83	64.228	Mola_mola
ENSDARG00000021112	c1d	96	63.380	ENSMODG00000003561	C1D	85	69.421	Monodelphis_domestica
ENSDARG00000021112	c1d	91	65.672	ENSMALG00000020864	c1d	92	68.333	Monopterus_albus
ENSDARG00000021112	c1d	96	60.563	MGP_CAROLIEiJ_G0016110	C1d	100	65.254	Mus_caroli
ENSDARG00000021112	c1d	96	60.563	ENSMUSG00000000581	C1d	100	65.254	Mus_musculus
ENSDARG00000021112	c1d	96	61.268	MGP_PahariEiJ_G0016781	C1d	100	66.102	Mus_pahari
ENSDARG00000021112	c1d	96	60.563	MGP_SPRETEiJ_G0016952	C1d	100	65.254	Mus_spretus
ENSDARG00000021112	c1d	95	60.993	ENSMPUG00000006224	C1D	87	65.854	Mustela_putorius_furo
ENSDARG00000021112	c1d	97	59.722	ENSMLUG00000029990	-	87	65.041	Myotis_lucifugus
ENSDARG00000021112	c1d	97	59.028	ENSMLUG00000024947	-	87	64.228	Myotis_lucifugus
ENSDARG00000021112	c1d	97	61.111	ENSMLUG00000010791	-	87	66.667	Myotis_lucifugus
ENSDARG00000021112	c1d	96	59.155	ENSNGAG00000011872	-	87	63.415	Nannospalax_galili
ENSDARG00000021112	c1d	95	55.319	ENSNGAG00000016675	-	87	59.836	Nannospalax_galili
ENSDARG00000021112	c1d	70	63.462	ENSNGAG00000012482	-	81	64.706	Nannospalax_galili
ENSDARG00000021112	c1d	83	66.667	ENSNBRG00000010704	c1d	81	68.644	Neolamprologus_brichardi
ENSDARG00000021112	c1d	96	59.859	ENSNLEG00000032919	-	68	65.041	Nomascus_leucogenys
ENSDARG00000021112	c1d	96	59.155	ENSOPRG00000009586	C1D	87	64.228	Ochotona_princeps
ENSDARG00000021112	c1d	86	63.281	ENSODEG00000011242	-	87	65.041	Octodon_degus
ENSDARG00000021112	c1d	86	63.281	ENSODEG00000018885	-	88	65.041	Octodon_degus
ENSDARG00000021112	c1d	96	52.817	ENSODEG00000018525	-	87	56.911	Octodon_degus
ENSDARG00000021112	c1d	83	67.480	ENSONIG00000001233	c1d	82	67.480	Oreochromis_niloticus
ENSDARG00000021112	c1d	64	76.596	ENSOANG00000008385	C1D	84	77.419	Ornithorhynchus_anatinus
ENSDARG00000021112	c1d	96	59.859	ENSOCUG00000009771	-	87	65.041	Oryctolagus_cuniculus
ENSDARG00000021112	c1d	96	59.859	ENSOCUG00000025587	-	87	65.041	Oryctolagus_cuniculus
ENSDARG00000021112	c1d	92	59.559	ENSORLG00000021968	c1d	74	65.517	Oryzias_latipes
ENSDARG00000021112	c1d	92	59.559	ENSORLG00020000507	c1d	75	65.517	Oryzias_latipes_hni
ENSDARG00000021112	c1d	92	58.824	ENSORLG00015004594	c1d	74	64.655	Oryzias_latipes_hsok
ENSDARG00000021112	c1d	97	58.741	ENSOMEG00000004672	c1d	79	64.228	Oryzias_melastigma
ENSDARG00000021112	c1d	96	58.451	ENSOGAG00000027934	-	87	63.415	Otolemur_garnettii
ENSDARG00000021112	c1d	95	60.284	ENSOARG00000019931	C1D	87	65.041	Ovis_aries
ENSDARG00000021112	c1d	95	60.284	ENSPPAG00000037847	-	87	65.041	Pan_paniscus
ENSDARG00000021112	c1d	91	59.259	ENSPPAG00000040091	-	67	64.103	Pan_paniscus
ENSDARG00000021112	c1d	96	38.732	ENSPPRG00000022830	-	84	40.650	Panthera_pardus
ENSDARG00000021112	c1d	95	60.284	ENSPPRG00000017045	-	87	65.041	Panthera_pardus
ENSDARG00000021112	c1d	95	60.284	ENSPTIG00000009414	C1D	87	65.041	Panthera_tigris_altaica
ENSDARG00000021112	c1d	95	60.284	ENSPTRG00000023558	C1D	87	65.041	Pan_troglodytes
ENSDARG00000021112	c1d	95	58.865	ENSPANG00000000501	-	87	63.415	Papio_anubis
ENSDARG00000021112	c1d	95	59.574	ENSPANG00000002886	C1D	68	65.041	Papio_anubis
ENSDARG00000021112	c1d	87	67.692	ENSPKIG00000004877	c1d	83	70.161	Paramormyrops_kingsleyae
ENSDARG00000021112	c1d	93	63.768	ENSPSIG00000010015	C1D	83	67.769	Pelodiscus_sinensis
ENSDARG00000021112	c1d	86	69.531	ENSPMGG00000009326	c1d	79	70.732	Periophthalmus_magnuspinnatus
ENSDARG00000021112	c1d	95	57.447	ENSPCIG00000006831	-	85	62.602	Phascolarctos_cinereus
ENSDARG00000021112	c1d	96	63.380	ENSPCIG00000018629	-	85	69.421	Phascolarctos_cinereus
ENSDARG00000021112	c1d	89	67.939	ENSPFOG00000003686	c1d	80	68.293	Poecilia_formosa
ENSDARG00000021112	c1d	89	67.939	ENSPLAG00000000228	c1d	87	68.293	Poecilia_latipinna
ENSDARG00000021112	c1d	89	67.939	ENSPMEG00000023213	c1d	80	68.293	Poecilia_mexicana
ENSDARG00000021112	c1d	93	65.217	ENSPREG00000000742	c1d	87	68.293	Poecilia_reticulata
ENSDARG00000021112	c1d	95	60.284	ENSPPYG00000012354	C1D	68	65.041	Pongo_abelii
ENSDARG00000021112	c1d	95	58.156	ENSPPYG00000002294	-	87	62.602	Pongo_abelii
ENSDARG00000021112	c1d	95	49.645	ENSPCAG00000010088	C1D	69	53.659	Procavia_capensis
ENSDARG00000021112	c1d	86	63.281	ENSPCOG00000016112	C1D	87	65.041	Propithecus_coquereli
ENSDARG00000021112	c1d	95	60.284	ENSPVAG00000012692	C1D	69	65.041	Pteropus_vampyrus
ENSDARG00000021112	c1d	83	66.400	ENSPNYG00000008789	c1d	81	67.797	Pundamilia_nyererei
ENSDARG00000021112	c1d	98	68.276	ENSPNAG00000004219	c1d	84	73.171	Pygocentrus_nattereri
ENSDARG00000021112	c1d	96	61.972	ENSRNOG00000005982	C1d	87	67.480	Rattus_norvegicus
ENSDARG00000021112	c1d	95	57.447	ENSRBIG00000026211	-	87	62.602	Rhinopithecus_bieti
ENSDARG00000021112	c1d	95	58.156	ENSRROG00000005944	-	87	63.415	Rhinopithecus_roxellana
ENSDARG00000021112	c1d	95	59.574	ENSRROG00000029013	C1D	87	65.041	Rhinopithecus_roxellana
ENSDARG00000021112	c1d	95	60.284	ENSSBOG00000025275	C1D	87	65.041	Saimiri_boliviensis_boliviensis
ENSDARG00000021112	c1d	96	63.380	ENSSHAG00000008352	C1D	58	69.421	Sarcophilus_harrisii
ENSDARG00000021112	c1d	87	72.093	ENSSFOG00015010861	c1d	88	73.171	Scleropages_formosus
ENSDARG00000021112	c1d	90	63.158	ENSSMAG00000019230	c1d	79	65.041	Scophthalmus_maximus
ENSDARG00000021112	c1d	91	66.418	ENSSDUG00000020213	c1d	79	69.919	Seriola_dumerili
ENSDARG00000021112	c1d	93	64.493	ENSSLDG00000017371	c1d	79	69.919	Seriola_lalandi_dorsalis
ENSDARG00000021112	c1d	84	71.200	ENSSPUG00000006525	C1D	85	71.774	Sphenodon_punctatus
ENSDARG00000021112	c1d	86	67.188	ENSSPAG00000008574	c1d	79	66.667	Stegastes_partitus
ENSDARG00000021112	c1d	72	54.717	ENSSSCG00000035701	-	94	52.212	Sus_scrofa
ENSDARG00000021112	c1d	95	60.284	ENSSSCG00000039331	-	87	65.041	Sus_scrofa
ENSDARG00000021112	c1d	86	66.929	ENSTGUG00000002367	C1D	84	69.421	Taeniopygia_guttata
ENSDARG00000021112	c1d	91	59.559	ENSTRUG00000012245	c1d	70	65.517	Takifugu_rubripes
ENSDARG00000021112	c1d	99	58.904	ENSTNIG00000009827	c1d	83	65.854	Tetraodon_nigroviridis
ENSDARG00000021112	c1d	96	59.155	ENSTBEG00000009797	C1D	87	65.041	Tupaia_belangeri
ENSDARG00000021112	c1d	95	60.284	ENSTTRG00000013982	C1D	71	65.041	Tursiops_truncatus
ENSDARG00000021112	c1d	95	52.083	ENSUAMG00000025246	C1D	86	55.556	Ursus_americanus
ENSDARG00000021112	c1d	68	55.446	ENSUMAG00000006451	-	91	54.054	Ursus_maritimus
ENSDARG00000021112	c1d	95	60.284	ENSUMAG00000021118	-	87	65.041	Ursus_maritimus
ENSDARG00000021112	c1d	86	62.500	ENSVPAG00000012080	C1D	69	64.228	Vicugna_pacos
ENSDARG00000021112	c1d	95	60.993	ENSVVUG00000027629	C1D	77	65.854	Vulpes_vulpes
ENSDARG00000021112	c1d	95	58.741	ENSXETG00000025934	c1d	86	62.903	Xenopus_tropicalis
ENSDARG00000021112	c1d	86	67.717	ENSXCOG00000013813	c1d	80	67.480	Xiphophorus_couchianus
ENSDARG00000021112	c1d	86	66.929	ENSXMAG00000022273	c1d	80	66.667	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process