EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000021402 (Gene tree)
Gene ID: 436589
Gene Symbol: mcm3ap
Alias: -
Full Name: minichromosome maintenance complex component 3 associated protein
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 25984 bases
Position: chr9:38457806-38483789
Accession: ZDB-GENE-040715-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121220	RRM_1	PF00076.22	2.9e-06	1	1
ENSDARP00000019686	RRM_1	PF00076.22	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000008053	-	9091	XM_005167868	ENSDARP00000019686	2118 (aa)	XP_005167925	F1Q712
ENSDART00000141954	-	686	-	-	- (aa)	-	-
ENSDART00000142512	-	6794	-	ENSDARP00000121220	2082 (aa)	-	B0S5L8

Gene Model

Click here to download ENSDARG00000021402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000021402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000021402	mcm3ap	100	49.417	ENSAPOG00000016059	mcm3ap	100	49.506	Acanthochromis_polyacanthus
ENSDARG00000021402	mcm3ap	98	51.699	ENSAOCG00000017340	mcm3ap	100	51.861	Amphiprion_ocellaris
ENSDARG00000021402	mcm3ap	98	51.699	ENSAPEG00000004174	mcm3ap	100	51.667	Amphiprion_percula
ENSDARG00000021402	mcm3ap	98	52.565	ENSATEG00000009074	mcm3ap	100	51.717	Anabas_testudineus
ENSDARG00000021402	mcm3ap	96	51.538	ENSACLG00000002461	mcm3ap	97	53.601	Astatotilapia_calliptera
ENSDARG00000021402	mcm3ap	98	47.125	ENSCSEG00000016295	mcm3ap	100	46.670	Cynoglossus_semilaevis
ENSDARG00000021402	mcm3ap	95	49.536	ENSCVAG00000022653	mcm3ap	99	49.304	Cyprinodon_variegatus
ENSDARG00000021402	mcm3ap	66	37.211	ENSEBUG00000007177	-	68	36.537	Eptatretus_burgeri
ENSDARG00000021402	mcm3ap	93	52.180	ENSELUG00000000499	mcm3ap	100	50.375	Esox_lucius
ENSDARG00000021402	mcm3ap	81	51.572	ENSFHEG00000001113	mcm3ap	93	51.813	Fundulus_heteroclitus
ENSDARG00000021402	mcm3ap	86	52.533	ENSGMOG00000012627	mcm3ap	90	52.577	Gadus_morhua
ENSDARG00000021402	mcm3ap	98	47.815	ENSGAFG00000010604	mcm3ap	95	48.068	Gambusia_affinis
ENSDARG00000021402	mcm3ap	98	47.174	ENSHCOG00000001542	mcm3ap	100	47.151	Hippocampus_comes
ENSDARG00000021402	mcm3ap	98	49.975	ENSKMAG00000017908	mcm3ap	98	50.377	Kryptolebias_marmoratus
ENSDARG00000021402	mcm3ap	86	44.486	ENSLACG00000010838	MCM3AP	95	42.800	Latimeria_chalumnae
ENSDARG00000021402	mcm3ap	98	51.962	ENSLOCG00000008893	mcm3ap	100	53.983	Lepisosteus_oculatus
ENSDARG00000021402	mcm3ap	88	48.495	ENSMAMG00000010786	mcm3ap	92	51.325	Mastacembelus_armatus
ENSDARG00000021402	mcm3ap	98	52.032	ENSMZEG00005014406	mcm3ap	94	51.327	Maylandia_zebra
ENSDARG00000021402	mcm3ap	79	51.426	ENSMMOG00000005054	mcm3ap	96	56.754	Mola_mola
ENSDARG00000021402	mcm3ap	62	52.795	ENSOANG00000028261	-	64	55.387	Ornithorhynchus_anatinus
ENSDARG00000021402	mcm3ap	84	47.782	ENSORLG00000014980	mcm3ap	99	47.679	Oryzias_latipes
ENSDARG00000021402	mcm3ap	84	48.818	ENSORLG00020005042	mcm3ap	97	48.485	Oryzias_latipes_hni
ENSDARG00000021402	mcm3ap	85	48.818	ENSORLG00015006487	mcm3ap	97	48.528	Oryzias_latipes_hsok
ENSDARG00000021402	mcm3ap	98	48.422	ENSOMEG00000021796	mcm3ap	100	48.295	Oryzias_melastigma
ENSDARG00000021402	mcm3ap	91	50.849	ENSPKIG00000014826	mcm3ap	100	51.167	Paramormyrops_kingsleyae
ENSDARG00000021402	mcm3ap	62	74.505	ENSPMGG00000014646	mcm3ap	94	74.505	Periophthalmus_magnuspinnatus
ENSDARG00000021402	mcm3ap	95	48.679	ENSPFOG00000012860	mcm3ap	99	49.693	Poecilia_formosa
ENSDARG00000021402	mcm3ap	98	45.960	ENSPLAG00000021578	mcm3ap	100	48.434	Poecilia_latipinna
ENSDARG00000021402	mcm3ap	98	46.511	ENSPMEG00000009875	mcm3ap	100	47.826	Poecilia_mexicana
ENSDARG00000021402	mcm3ap	75	53.115	ENSPREG00000000812	mcm3ap	99	53.619	Poecilia_reticulata
ENSDARG00000021402	mcm3ap	81	54.280	ENSPNYG00000011931	mcm3ap	86	53.904	Pundamilia_nyererei
ENSDARG00000021402	mcm3ap	99	59.648	ENSPNAG00000002665	mcm3ap	100	59.042	Pygocentrus_nattereri
ENSDARG00000021402	mcm3ap	90	54.614	ENSSFOG00015016895	mcm3ap	99	54.467	Scleropages_formosus
ENSDARG00000021402	mcm3ap	93	51.620	ENSSMAG00000017233	mcm3ap	98	51.411	Scophthalmus_maximus
ENSDARG00000021402	mcm3ap	98	51.303	ENSSPAG00000015778	mcm3ap	100	51.514	Stegastes_partitus
ENSDARG00000021402	mcm3ap	89	47.189	ENSTRUG00000005210	mcm3ap	98	47.159	Takifugu_rubripes
ENSDARG00000021402	mcm3ap	90	37.506	ENSTNIG00000011557	-	98	36.583	Tetraodon_nigroviridis
ENSDARG00000021402	mcm3ap	67	53.793	ENSXCOG00000016176	mcm3ap	83	57.217	Xiphophorus_couchianus
ENSDARG00000021402	mcm3ap	98	47.961	ENSXMAG00000015028	mcm3ap	96	47.979	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0016973	poly(A)+ mRNA export from nucleus	21873635.	IBA	Process
GO:0070390	transcription export complex 2	21873635.	IBA	Component