EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000021466 (Gene tree)
Gene ID: 652982
Gene Symbol: ireb2
Alias: IRP2|im:7153062
Full Name: iron-responsive element binding protein 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 33198 bases
Position: chr25:6228496-6261693
Accession: ZDB-GENE-051205-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000117448	Aconitase	PF00330.20	1.9e-148	1	2
ENSDARP00000117448	Aconitase	PF00330.20	1.9e-148	2	2
ENSDARP00000117448	Aconitase_C	PF00694.19	1.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135808	-	3091	XM_005162972	ENSDARP00000117448	974 (aa)	XP_005163029	F1QNR8

Gene Model

Click here to download ENSDARG00000021466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000021466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000021466	ireb2	91	60.719	ENSDARG00000026376	aco1	99	60.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000021466	ireb2	99	65.975	ENSG00000136381	IREB2	100	68.421	Homo_sapiens
ENSDARG00000021466	ireb2	99	77.926	ENSAPOG00000015501	-	99	77.618	Acanthochromis_polyacanthus
ENSDARG00000021466	ireb2	99	77.926	ENSAPOG00000016684	ireb2	99	78.013	Acanthochromis_polyacanthus
ENSDARG00000021466	ireb2	99	77.926	ENSAPOG00000020564	ireb2	99	77.618	Acanthochromis_polyacanthus
ENSDARG00000021466	ireb2	99	65.186	ENSAMEG00000012645	IREB2	99	65.052	Ailuropoda_melanoleuca
ENSDARG00000021466	ireb2	99	77.380	ENSACIG00000012557	ireb2	99	77.492	Amphilophus_citrinellus
ENSDARG00000021466	ireb2	99	77.766	ENSAOCG00000000407	ireb2	99	78.189	Amphiprion_ocellaris
ENSDARG00000021466	ireb2	99	77.541	ENSAPEG00000009121	ireb2	100	77.959	Amphiprion_percula
ENSDARG00000021466	ireb2	99	75.464	ENSATEG00000021145	ireb2	99	75.412	Anabas_testudineus
ENSDARG00000021466	ireb2	99	73.711	ENSATEG00000021210	ireb2	99	73.663	Anabas_testudineus
ENSDARG00000021466	ireb2	99	65.602	ENSAPLG00000016388	IREB2	99	65.262	Anas_platyrhynchos
ENSDARG00000021466	ireb2	99	66.183	ENSANAG00000021994	IREB2	99	65.836	Aotus_nancymaae
ENSDARG00000021466	ireb2	99	78.029	ENSACLG00000024688	ireb2	100	78.051	Astatotilapia_calliptera
ENSDARG00000021466	ireb2	99	79.179	ENSAMXG00000008756	ireb2	99	78.974	Astyanax_mexicanus
ENSDARG00000021466	ireb2	99	65.664	ENSBTAG00000002504	IREB2	99	65.317	Bos_taurus
ENSDARG00000021466	ireb2	99	65.975	ENSCJAG00000010259	IREB2	99	65.628	Callithrix_jacchus
ENSDARG00000021466	ireb2	99	65.735	ENSCAFG00000001766	IREB2	99	65.389	Canis_familiaris
ENSDARG00000021466	ireb2	99	65.735	ENSCAFG00020021072	IREB2	99	66.845	Canis_lupus_dingo
ENSDARG00000021466	ireb2	99	65.975	ENSCHIG00000023111	IREB2	99	65.628	Capra_hircus
ENSDARG00000021466	ireb2	99	65.602	ENSTSYG00000011729	IREB2	99	65.499	Carlito_syrichta
ENSDARG00000021466	ireb2	86	62.434	ENSCAPG00000011854	IREB2	99	61.996	Cavia_aperea
ENSDARG00000021466	ireb2	86	66.914	ENSCPOG00000013905	IREB2	99	66.914	Cavia_porcellus
ENSDARG00000021466	ireb2	99	66.424	ENSCCAG00000021202	IREB2	99	66.077	Cebus_capucinus
ENSDARG00000021466	ireb2	99	66.183	ENSCATG00000033462	IREB2	99	65.836	Cercocebus_atys
ENSDARG00000021466	ireb2	99	66.632	ENSCLAG00000008985	IREB2	99	66.494	Chinchilla_lanigera
ENSDARG00000021466	ireb2	99	66.183	ENSCSAG00000014904	IREB2	99	65.836	Chlorocebus_sabaeus
ENSDARG00000021466	ireb2	99	63.098	ENSCHOG00000004107	IREB2	99	62.747	Choloepus_hoffmanni
ENSDARG00000021466	ireb2	99	66.667	ENSCPBG00000024247	IREB2	99	68.612	Chrysemys_picta_bellii
ENSDARG00000021466	ireb2	99	66.079	ENSCANG00000029420	IREB2	99	65.732	Colobus_angolensis_palliatus
ENSDARG00000021466	ireb2	99	65.975	ENSCGRG00001019234	Ireb2	99	65.628	Cricetulus_griseus_chok1gshd
ENSDARG00000021466	ireb2	99	65.975	ENSCGRG00000016786	Ireb2	99	65.628	Cricetulus_griseus_crigri
ENSDARG00000021466	ireb2	99	74.002	ENSCSEG00000003080	ireb2	100	74.002	Cynoglossus_semilaevis
ENSDARG00000021466	ireb2	99	75.000	ENSCVAG00000010739	ireb2	97	75.773	Cyprinodon_variegatus
ENSDARG00000021466	ireb2	95	65.491	ENSDNOG00000009614	IREB2	99	65.491	Dasypus_novemcinctus
ENSDARG00000021466	ireb2	90	62.912	ENSDORG00000014339	Ireb2	99	58.161	Dipodomys_ordii
ENSDARG00000021466	ireb2	74	65.854	ENSETEG00000012717	IREB2	74	65.854	Echinops_telfairi
ENSDARG00000021466	ireb2	99	66.216	ENSEASG00005015622	IREB2	99	65.738	Equus_asinus_asinus
ENSDARG00000021466	ireb2	99	66.216	ENSECAG00000016731	IREB2	99	70.878	Equus_caballus
ENSDARG00000021466	ireb2	92	62.695	ENSEEUG00000007999	IREB2	99	62.099	Erinaceus_europaeus
ENSDARG00000021466	ireb2	99	77.111	ENSELUG00000023666	ireb2	100	76.939	Esox_lucius
ENSDARG00000021466	ireb2	99	65.424	ENSFCAG00000001921	IREB2	99	65.078	Felis_catus
ENSDARG00000021466	ireb2	91	68.792	ENSFALG00000010640	IREB2	99	68.792	Ficedula_albicollis
ENSDARG00000021466	ireb2	99	67.011	ENSFDAG00000009355	IREB2	99	66.427	Fukomys_damarensis
ENSDARG00000021466	ireb2	99	75.866	ENSFHEG00000017905	ireb2	97	76.727	Fundulus_heteroclitus
ENSDARG00000021466	ireb2	99	73.354	ENSGMOG00000009184	ireb2	99	72.970	Gadus_morhua
ENSDARG00000021466	ireb2	99	65.400	ENSGALG00000035462	IREB2	100	65.333	Gallus_gallus
ENSDARG00000021466	ireb2	99	73.146	ENSGAFG00000005145	ireb2	98	73.046	Gambusia_affinis
ENSDARG00000021466	ireb2	99	75.642	ENSGACG00000007341	ireb2	96	79.208	Gasterosteus_aculeatus
ENSDARG00000021466	ireb2	99	65.749	ENSGAGG00000006117	IREB2	96	66.086	Gopherus_agassizii
ENSDARG00000021466	ireb2	99	66.079	ENSGGOG00000015650	IREB2	99	65.732	Gorilla_gorilla
ENSDARG00000021466	ireb2	99	77.926	ENSHBUG00000007184	ireb2	100	77.949	Haplochromis_burtoni
ENSDARG00000021466	ireb2	99	67.012	ENSHGLG00000000783	Ireb2	99	66.426	Heterocephalus_glaber_female
ENSDARG00000021466	ireb2	99	67.012	ENSHGLG00100019429	Ireb2	99	66.426	Heterocephalus_glaber_male
ENSDARG00000021466	ireb2	97	74.921	ENSHCOG00000007424	ireb2	99	74.921	Hippocampus_comes
ENSDARG00000021466	ireb2	99	78.763	ENSIPUG00000014808	Ireb2	99	78.800	Ictalurus_punctatus
ENSDARG00000021466	ireb2	99	66.079	ENSSTOG00000009273	IREB2	99	65.836	Ictidomys_tridecemlineatus
ENSDARG00000021466	ireb2	99	61.905	ENSJJAG00000019768	Ireb2	99	61.554	Jaculus_jaculus
ENSDARG00000021466	ireb2	99	75.358	ENSKMAG00000016020	ireb2	98	75.358	Kryptolebias_marmoratus
ENSDARG00000021466	ireb2	99	76.507	ENSLBEG00000020371	ireb2	100	76.507	Labrus_bergylta
ENSDARG00000021466	ireb2	99	60.821	ENSLACG00000001182	IREB2	99	60.575	Latimeria_chalumnae
ENSDARG00000021466	ireb2	99	73.571	ENSLOCG00000015029	ireb2	99	73.620	Lepisosteus_oculatus
ENSDARG00000021466	ireb2	99	65.596	ENSLAFG00000012839	IREB2	99	65.249	Loxodonta_africana
ENSDARG00000021466	ireb2	99	66.183	ENSMFAG00000039630	IREB2	99	65.836	Macaca_fascicularis
ENSDARG00000021466	ireb2	99	66.183	ENSMMUG00000045680	IREB2	99	65.836	Macaca_mulatta
ENSDARG00000021466	ireb2	99	64.108	ENSMNEG00000039698	IREB2	99	63.759	Macaca_nemestrina
ENSDARG00000021466	ireb2	99	66.183	ENSMLEG00000031047	IREB2	99	65.836	Mandrillus_leucophaeus
ENSDARG00000021466	ireb2	99	77.222	ENSMAMG00000023095	ireb2	100	77.096	Mastacembelus_armatus
ENSDARG00000021466	ireb2	99	78.029	ENSMZEG00005010935	ireb2	100	78.051	Maylandia_zebra
ENSDARG00000021466	ireb2	99	65.907	ENSMGAG00000003688	IREB2	99	65.664	Meleagris_gallopavo
ENSDARG00000021466	ireb2	99	65.975	ENSMICG00000005757	IREB2	99	65.628	Microcebus_murinus
ENSDARG00000021466	ireb2	99	65.664	ENSMOCG00000010784	Ireb2	99	65.317	Microtus_ochrogaster
ENSDARG00000021466	ireb2	99	77.160	ENSMMOG00000001385	ireb2	97	76.742	Mola_mola
ENSDARG00000021466	ireb2	97	66.912	ENSMODG00000011768	IREB2	98	66.807	Monodelphis_domestica
ENSDARG00000021466	ireb2	99	75.154	ENSMALG00000015314	ireb2	99	75.180	Monopterus_albus
ENSDARG00000021466	ireb2	99	65.803	MGP_CAROLIEiJ_G0032235	Ireb2	99	65.456	Mus_caroli
ENSDARG00000021466	ireb2	99	66.114	ENSMUSG00000032293	Ireb2	99	65.768	Mus_musculus
ENSDARG00000021466	ireb2	99	66.044	MGP_PahariEiJ_G0015103	Ireb2	99	65.696	Mus_pahari
ENSDARG00000021466	ireb2	99	66.114	MGP_SPRETEiJ_G0033375	Ireb2	99	65.768	Mus_spretus
ENSDARG00000021466	ireb2	99	66.184	ENSMPUG00000010978	IREB2	95	65.606	Mustela_putorius_furo
ENSDARG00000021466	ireb2	99	64.948	ENSMLUG00000006783	IREB2	99	64.513	Myotis_lucifugus
ENSDARG00000021466	ireb2	99	65.904	ENSNGAG00000017333	Ireb2	99	65.557	Nannospalax_galili
ENSDARG00000021466	ireb2	99	77.482	ENSNBRG00000017676	ireb2	99	80.908	Neolamprologus_brichardi
ENSDARG00000021466	ireb2	99	65.975	ENSNLEG00000008549	IREB2	99	65.628	Nomascus_leucogenys
ENSDARG00000021466	ireb2	74	75.728	ENSMEUG00000001630	-	74	75.728	Notamacropus_eugenii
ENSDARG00000021466	ireb2	99	62.474	ENSOPRG00000000340	IREB2	99	61.499	Ochotona_princeps
ENSDARG00000021466	ireb2	99	66.426	ENSODEG00000015993	IREB2	99	65.369	Octodon_degus
ENSDARG00000021466	ireb2	99	77.687	ENSONIG00000012838	ireb2	100	77.687	Oreochromis_niloticus
ENSDARG00000021466	ireb2	99	67.150	ENSOANG00000013218	-	98	66.944	Ornithorhynchus_anatinus
ENSDARG00000021466	ireb2	93	67.508	ENSOCUG00000009907	IREB2	99	66.885	Oryctolagus_cuniculus
ENSDARG00000021466	ireb2	99	75.640	ENSORLG00000001943	ireb2	92	75.640	Oryzias_latipes
ENSDARG00000021466	ireb2	99	75.537	ENSORLG00020000623	ireb2	97	75.537	Oryzias_latipes_hni
ENSDARG00000021466	ireb2	99	75.612	ENSORLG00015014057	ireb2	98	75.612	Oryzias_latipes_hsok
ENSDARG00000021466	ireb2	99	74.949	ENSOMEG00000005120	ireb2	98	74.949	Oryzias_melastigma
ENSDARG00000021466	ireb2	99	63.617	ENSOGAG00000010622	IREB2	99	63.382	Otolemur_garnettii
ENSDARG00000021466	ireb2	99	65.460	ENSOARG00000000881	IREB2	99	65.222	Ovis_aries
ENSDARG00000021466	ireb2	99	65.975	ENSPPAG00000038956	IREB2	99	65.628	Pan_paniscus
ENSDARG00000021466	ireb2	99	65.528	ENSPPRG00000003145	IREB2	99	65.181	Panthera_pardus
ENSDARG00000021466	ireb2	99	64.990	ENSPTIG00000021418	IREB2	86	64.645	Panthera_tigris_altaica
ENSDARG00000021466	ireb2	99	65.975	ENSPTRG00000007342	IREB2	99	65.628	Pan_troglodytes
ENSDARG00000021466	ireb2	99	66.183	ENSPANG00000015813	IREB2	99	65.836	Papio_anubis
ENSDARG00000021466	ireb2	100	73.238	ENSPKIG00000012755	ireb2	99	72.893	Paramormyrops_kingsleyae
ENSDARG00000021466	ireb2	88	68.433	ENSPSIG00000009905	IREB2	97	68.445	Pelodiscus_sinensis
ENSDARG00000021466	ireb2	99	74.613	ENSPMGG00000016828	ireb2	99	74.613	Periophthalmus_magnuspinnatus
ENSDARG00000021466	ireb2	99	66.183	ENSPEMG00000020204	Ireb2	99	65.836	Peromyscus_maniculatus_bairdii
ENSDARG00000021466	ireb2	99	66.218	ENSPCIG00000019022	IREB2	87	66.079	Phascolarctos_cinereus
ENSDARG00000021466	ireb2	99	75.458	ENSPFOG00000014509	ireb2	98	75.485	Poecilia_formosa
ENSDARG00000021466	ireb2	99	75.230	ENSPLAG00000002220	ireb2	98	75.359	Poecilia_latipinna
ENSDARG00000021466	ireb2	99	75.560	ENSPMEG00000010284	ireb2	98	76.341	Poecilia_mexicana
ENSDARG00000021466	ireb2	99	75.483	ENSPREG00000012857	ireb2	98	75.612	Poecilia_reticulata
ENSDARG00000021466	ireb2	58	70.285	ENSPPYG00000006696	-	99	70.285	Pongo_abelii
ENSDARG00000021466	ireb2	89	67.778	ENSPCAG00000001992	IREB2	89	67.778	Procavia_capensis
ENSDARG00000021466	ireb2	99	66.008	ENSPCOG00000021988	IREB2	99	65.661	Propithecus_coquereli
ENSDARG00000021466	ireb2	86	63.661	ENSPVAG00000014630	IREB2	87	63.477	Pteropus_vampyrus
ENSDARG00000021466	ireb2	99	77.687	ENSPNYG00000008976	ireb2	100	77.710	Pundamilia_nyererei
ENSDARG00000021466	ireb2	99	78.138	ENSPNAG00000027252	ireb2	99	78.974	Pygocentrus_nattereri
ENSDARG00000021466	ireb2	99	65.803	ENSRNOG00000013271	Ireb2	99	65.456	Rattus_norvegicus
ENSDARG00000021466	ireb2	99	66.079	ENSRBIG00000033855	IREB2	99	65.732	Rhinopithecus_bieti
ENSDARG00000021466	ireb2	99	66.079	ENSRROG00000001424	IREB2	99	66.809	Rhinopithecus_roxellana
ENSDARG00000021466	ireb2	99	65.975	ENSSBOG00000030803	IREB2	97	67.874	Saimiri_boliviensis_boliviensis
ENSDARG00000021466	ireb2	69	65.985	ENSSHAG00000017490	-	97	65.839	Sarcophilus_harrisii
ENSDARG00000021466	ireb2	100	74.411	ENSSFOG00015022085	ireb2	97	74.233	Scleropages_formosus
ENSDARG00000021466	ireb2	99	76.907	ENSSMAG00000005657	ireb2	99	80.984	Scophthalmus_maximus
ENSDARG00000021466	ireb2	99	77.551	ENSSDUG00000023484	ireb2	100	77.551	Seriola_dumerili
ENSDARG00000021466	ireb2	99	77.653	ENSSLDG00000001705	ireb2	100	77.551	Seriola_lalandi_dorsalis
ENSDARG00000021466	ireb2	96	66.096	ENSSARG00000001203	IREB2	99	65.711	Sorex_araneus
ENSDARG00000021466	ireb2	99	66.460	ENSSPUG00000006298	IREB2	99	66.254	Sphenodon_punctatus
ENSDARG00000021466	ireb2	99	78.141	ENSSPAG00000000877	ireb2	100	77.732	Stegastes_partitus
ENSDARG00000021466	ireb2	99	65.871	ENSSSCG00000001756	IREB2	99	65.524	Sus_scrofa
ENSDARG00000021466	ireb2	99	64.809	ENSTGUG00000003332	IREB2	99	65.119	Taeniopygia_guttata
ENSDARG00000021466	ireb2	99	74.315	ENSTRUG00000015902	ireb2	100	74.187	Takifugu_rubripes
ENSDARG00000021466	ireb2	92	56.822	ENSTBEG00000010922	IREB2	93	56.822	Tupaia_belangeri
ENSDARG00000021466	ireb2	99	56.877	ENSTTRG00000000698	IREB2	99	56.522	Tursiops_truncatus
ENSDARG00000021466	ireb2	93	67.470	ENSUAMG00000017908	IREB2	99	67.215	Ursus_americanus
ENSDARG00000021466	ireb2	99	64.907	ENSUMAG00000011242	IREB2	99	64.932	Ursus_maritimus
ENSDARG00000021466	ireb2	99	65.357	ENSVPAG00000008245	IREB2	99	65.253	Vicugna_pacos
ENSDARG00000021466	ireb2	93	67.470	ENSVVUG00000007811	IREB2	99	67.105	Vulpes_vulpes
ENSDARG00000021466	ireb2	99	56.057	ENSXETG00000009774	ireb2	99	55.967	Xenopus_tropicalis
ENSDARG00000021466	ireb2	99	75.205	ENSXCOG00000020858	ireb2	98	75.231	Xiphophorus_couchianus
ENSDARG00000021466	ireb2	99	75.512	ENSXMAG00000002195	ireb2	98	75.540	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001069	regulatory region RNA binding	21873635.	IBA	Function
GO:0003994	aconitate hydratase activity	21873635.	IBA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006099	tricarboxylic acid cycle	21873635.	IBA	Process
GO:0006101	citrate metabolic process	21873635.	IBA	Process
GO:0006417	regulation of translation	21873635.	IBA	Process
GO:0006782	protoporphyrinogen IX biosynthetic process	21873635.	IBA	Process
GO:0006879	cellular iron ion homeostasis	21873635.	IBA	Process
GO:0006879	cellular iron ion homeostasis	-	IEA	Process
GO:0007420	brain development	21873635.	IBA	Process
GO:0007568	aging	21873635.	IBA	Process
GO:0009791	post-embryonic development	21873635.	IBA	Process
GO:0010040	response to iron(II) ion	21873635.	IBA	Process
GO:0010041	response to iron(III) ion	21873635.	IBA	Process
GO:0010043	response to zinc ion	21873635.	IBA	Process
GO:0014732	skeletal muscle atrophy	21873635.	IBA	Process
GO:0014823	response to activity	21873635.	IBA	Process
GO:0017148	negative regulation of translation	21873635.	IBA	Process
GO:0017148	negative regulation of translation	-	IEA	Process
GO:0030316	osteoclast differentiation	21873635.	IBA	Process
GO:0030350	iron-responsive element binding	21873635.	IBA	Function
GO:0030350	iron-responsive element binding	-	IEA	Function
GO:0030371	translation repressor activity	-	IEA	Function
GO:0030424	axon	21873635.	IBA	Component
GO:0032526	response to retinoic acid	21873635.	IBA	Process
GO:0034101	erythrocyte homeostasis	21873635.	IBA	Process
GO:0046688	response to copper ion	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051536	iron-sulfur cluster binding	-	IEA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	21873635.	IBA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	-	IEA	Function
GO:0071283	cellular response to iron(III) ion	21873635.	IBA	Process
GO:0071287	cellular response to manganese ion	21873635.	IBA	Process
GO:0071300	cellular response to retinoic acid	21873635.	IBA	Process
GO:0071364	cellular response to epidermal growth factor stimulus	21873635.	IBA	Process
GO:0071456	cellular response to hypoxia	21873635.	IBA	Process
GO:0072705	cellular response to mercaptoethanol	21873635.	IBA	Process
GO:0090650	cellular response to oxygen-glucose deprivation	21873635.	IBA	Process
GO:1904373	response to kainic acid	21873635.	IBA	Process
GO:1990910	response to hypobaric hypoxia	21873635.	IBA	Process