EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000021812 (Gene tree)
Gene ID: 337851
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 27676 bases
Position: chr22:4962370-4990045
Accession: ZDB-GENE-040407-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000108124	Surp	PF01805.20	3.8e-16	1	1
ENSDARP00000146365	Surp	PF01805.20	4.5e-15	1	1
ENSDARP00000030934	Surp	PF01805.20	4.6e-15	1	1
ENSDARP00000151486	Surp	PF01805.20	4.6e-15	1	1
ENSDARP00000146365	G-patch	PF01585.23	7.9e-11	1	1
ENSDARP00000030934	G-patch	PF01585.23	8.1e-11	1	1
ENSDARP00000151486	G-patch	PF01585.23	8.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000183294	-	3010	-	ENSDARP00000146365	898 (aa)	-	A0A2R8PZL7
ENSDART00000125265	-	947	-	ENSDARP00000108124	255 (aa)	-	A5WWH4
ENSDART00000028634	-	3205	-	ENSDARP00000030934	909 (aa)	-	F1RC75
ENSDART00000181359	-	2965	-	ENSDARP00000151486	910 (aa)	-	B7ZVL5

Gene Model

Click here to download ENSDARG00000021812's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000021812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000021812	cherp	100	78.113	ENSG00000085872	CHERP	99	67.965	Homo_sapiens
ENSDARG00000021812	cherp	62	70.423	ENSAPOG00000009646	cherp	99	70.819	Acanthochromis_polyacanthus
ENSDARG00000021812	cherp	100	78.824	ENSAPOG00000019215	cherp	97	80.277	Acanthochromis_polyacanthus
ENSDARG00000021812	cherp	98	77.344	ENSAMEG00000010048	CHERP	99	66.630	Ailuropoda_melanoleuca
ENSDARG00000021812	cherp	100	75.824	ENSAOCG00000017846	cherp	100	71.694	Amphiprion_ocellaris
ENSDARG00000021812	cherp	100	76.384	ENSAPEG00000021128	cherp	100	72.101	Amphiprion_percula
ENSDARG00000021812	cherp	100	78.210	ENSATEG00000006341	cherp	99	72.350	Anabas_testudineus
ENSDARG00000021812	cherp	90	72.199	ENSAPLG00000010773	CHERP	99	66.115	Anas_platyrhynchos
ENSDARG00000021812	cherp	100	74.638	ENSANAG00000024284	CHERP	99	67.059	Aotus_nancymaae
ENSDARG00000021812	cherp	100	79.767	ENSACLG00000020053	cherp	100	73.742	Astatotilapia_calliptera
ENSDARG00000021812	cherp	100	84.825	ENSAMXG00000021637	cherp	94	79.233	Astyanax_mexicanus
ENSDARG00000021812	cherp	100	75.954	ENSBTAG00000005289	CHERP	99	67.822	Bos_taurus
ENSDARG00000021812	cherp	100	74.275	ENSCJAG00000040462	CHERP	99	67.059	Callithrix_jacchus
ENSDARG00000021812	cherp	100	77.481	ENSCAFG00000015671	CHERP	99	67.931	Canis_familiaris
ENSDARG00000021812	cherp	100	76.336	ENSCAFG00020009941	CHERP	91	82.524	Canis_lupus_dingo
ENSDARG00000021812	cherp	100	76.336	ENSCHIG00000013765	CHERP	96	84.043	Capra_hircus
ENSDARG00000021812	cherp	89	64.910	ENSCAPG00000000910	CHERP	68	70.561	Cavia_aperea
ENSDARG00000021812	cherp	100	76.718	ENSCPOG00000019949	CHERP	99	67.025	Cavia_porcellus
ENSDARG00000021812	cherp	100	74.638	ENSCCAG00000031534	CHERP	99	66.952	Cebus_capucinus
ENSDARG00000021812	cherp	100	73.260	ENSCATG00000031409	CHERP	99	66.845	Cercocebus_atys
ENSDARG00000021812	cherp	88	67.308	ENSCLAG00000005484	CHERP	94	67.428	Chinchilla_lanigera
ENSDARG00000021812	cherp	100	76.718	ENSCSAG00000005740	CHERP	99	67.931	Chlorocebus_sabaeus
ENSDARG00000021812	cherp	100	74.815	ENSCPBG00000014970	CHERP	100	67.787	Chrysemys_picta_bellii
ENSDARG00000021812	cherp	95	51.471	ENSCING00000004814	-	78	57.895	Ciona_intestinalis
ENSDARG00000021812	cherp	96	41.176	ENSCSAVG00000002455	-	53	64.000	Ciona_savignyi
ENSDARG00000021812	cherp	100	76.692	ENSCANG00000032053	CHERP	99	67.931	Colobus_angolensis_palliatus
ENSDARG00000021812	cherp	100	72.464	ENSCGRG00001023316	Cherp	99	66.773	Cricetulus_griseus_chok1gshd
ENSDARG00000021812	cherp	98	76.834	ENSCGRG00000015901	Cherp	99	67.861	Cricetulus_griseus_crigri
ENSDARG00000021812	cherp	100	78.764	ENSCSEG00000019700	cherp	100	71.658	Cynoglossus_semilaevis
ENSDARG00000021812	cherp	100	80.233	ENSCVAG00000003622	cherp	93	72.464	Cyprinodon_variegatus
ENSDARG00000021812	cherp	98	75.194	ENSDORG00000027623	Cherp	100	67.249	Dipodomys_ordii
ENSDARG00000021812	cherp	87	62.500	FBgn0261872	scaf6	54	62.500	Drosophila_melanogaster
ENSDARG00000021812	cherp	85	74.123	ENSETEG00000019543	CHERP	83	74.554	Echinops_telfairi
ENSDARG00000021812	cherp	100	73.134	ENSEBUG00000009109	cherp	68	74.026	Eptatretus_burgeri
ENSDARG00000021812	cherp	100	76.226	ENSEASG00005000428	CHERP	92	67.931	Equus_asinus_asinus
ENSDARG00000021812	cherp	100	76.404	ENSECAG00000012713	CHERP	99	67.822	Equus_caballus
ENSDARG00000021812	cherp	100	81.961	ENSELUG00000023026	cherp	98	72.667	Esox_lucius
ENSDARG00000021812	cherp	100	72.894	ENSFCAG00000013172	CHERP	99	66.774	Felis_catus
ENSDARG00000021812	cherp	100	74.717	ENSFALG00000013410	CHERP	86	66.270	Ficedula_albicollis
ENSDARG00000021812	cherp	96	72.348	ENSFDAG00000015981	CHERP	100	60.065	Fukomys_damarensis
ENSDARG00000021812	cherp	96	72.358	ENSFHEG00000009720	cherp	79	67.089	Fundulus_heteroclitus
ENSDARG00000021812	cherp	97	77.734	ENSGMOG00000008654	cherp	99	70.737	Gadus_morhua
ENSDARG00000021812	cherp	100	74.340	ENSGALG00000003824	CHERP	88	66.990	Gallus_gallus
ENSDARG00000021812	cherp	100	82.171	ENSGAFG00000004421	cherp	80	82.099	Gambusia_affinis
ENSDARG00000021812	cherp	98	73.234	ENSGACG00000002053	cherp	99	68.074	Gasterosteus_aculeatus
ENSDARG00000021812	cherp	100	74.444	ENSGAGG00000014208	CHERP	100	67.787	Gopherus_agassizii
ENSDARG00000021812	cherp	61	84.783	ENSGGOG00000016348	CHERP	95	56.115	Gorilla_gorilla
ENSDARG00000021812	cherp	100	79.767	ENSHBUG00000007405	cherp	100	73.961	Haplochromis_burtoni
ENSDARG00000021812	cherp	100	75.954	ENSHGLG00000002993	CHERP	99	67.535	Heterocephalus_glaber_female
ENSDARG00000021812	cherp	96	71.483	ENSHGLG00100010390	CHERP	74	72.537	Heterocephalus_glaber_male
ENSDARG00000021812	cherp	100	73.764	ENSHCOG00000007691	cherp	99	69.247	Hippocampus_comes
ENSDARG00000021812	cherp	100	85.490	ENSIPUG00000025008	cherp	100	80.528	Ictalurus_punctatus
ENSDARG00000021812	cherp	96	77.344	ENSSTOG00000012089	CHERP	99	68.087	Ictidomys_tridecemlineatus
ENSDARG00000021812	cherp	100	77.481	ENSJJAG00000017982	Cherp	81	70.325	Jaculus_jaculus
ENSDARG00000021812	cherp	100	79.468	ENSKMAG00000009101	cherp	100	72.113	Kryptolebias_marmoratus
ENSDARG00000021812	cherp	96	76.863	ENSLBEG00000007586	cherp	91	72.778	Labrus_bergylta
ENSDARG00000021812	cherp	100	76.226	ENSLACG00000018221	CHERP	99	64.762	Latimeria_chalumnae
ENSDARG00000021812	cherp	100	79.104	ENSLOCG00000003654	cherp	78	77.548	Lepisosteus_oculatus
ENSDARG00000021812	cherp	100	75.472	ENSLAFG00000009096	CHERP	100	67.904	Loxodonta_africana
ENSDARG00000021812	cherp	100	73.260	ENSMFAG00000033267	CHERP	99	66.916	Macaca_fascicularis
ENSDARG00000021812	cherp	100	73.260	ENSMMUG00000012958	CHERP	82	69.159	Macaca_mulatta
ENSDARG00000021812	cherp	100	73.260	ENSMNEG00000004125	CHERP	99	66.916	Macaca_nemestrina
ENSDARG00000021812	cherp	100	73.260	ENSMLEG00000044337	CHERP	99	66.482	Mandrillus_leucophaeus
ENSDARG00000021812	cherp	100	78.295	ENSMAMG00000022269	cherp	100	72.598	Mastacembelus_armatus
ENSDARG00000021812	cherp	100	79.767	ENSMZEG00005018014	cherp	100	73.742	Maylandia_zebra
ENSDARG00000021812	cherp	64	83.951	ENSMGAG00000005571	CHERP	93	68.727	Meleagris_gallopavo
ENSDARG00000021812	cherp	100	75.954	ENSMAUG00000015856	Cherp	99	66.987	Mesocricetus_auratus
ENSDARG00000021812	cherp	100	77.432	ENSMICG00000004577	CHERP	100	67.815	Microcebus_murinus
ENSDARG00000021812	cherp	100	75.472	ENSMOCG00000014697	Cherp	99	68.035	Microtus_ochrogaster
ENSDARG00000021812	cherp	99	77.481	ENSMMOG00000008525	cherp	80	75.035	Mola_mola
ENSDARG00000021812	cherp	100	75.093	ENSMODG00000014938	CHERP	100	66.667	Monodelphis_domestica
ENSDARG00000021812	cherp	100	77.432	ENSMALG00000020688	cherp	100	72.026	Monopterus_albus
ENSDARG00000021812	cherp	100	75.472	MGP_CAROLIEiJ_G0031220	Cherp	99	67.167	Mus_caroli
ENSDARG00000021812	cherp	100	75.472	ENSMUSG00000052488	Cherp	99	67.273	Mus_musculus
ENSDARG00000021812	cherp	100	75.472	MGP_PahariEiJ_G0021685	Cherp	99	67.459	Mus_pahari
ENSDARG00000021812	cherp	100	75.472	MGP_SPRETEiJ_G0032341	Cherp	99	67.312	Mus_spretus
ENSDARG00000021812	cherp	100	77.099	ENSMPUG00000016023	CHERP	77	70.095	Mustela_putorius_furo
ENSDARG00000021812	cherp	100	60.448	ENSMLUG00000013881	CHERP	99	62.177	Myotis_lucifugus
ENSDARG00000021812	cherp	100	75.191	ENSNGAG00000023323	Cherp	99	66.134	Nannospalax_galili
ENSDARG00000021812	cherp	100	75.373	ENSNBRG00000001914	cherp	81	72.527	Neolamprologus_brichardi
ENSDARG00000021812	cherp	100	76.718	ENSNLEG00000005536	CHERP	99	67.822	Nomascus_leucogenys
ENSDARG00000021812	cherp	100	77.481	ENSMEUG00000010840	CHERP	91	78.082	Notamacropus_eugenii
ENSDARG00000021812	cherp	96	76.587	ENSODEG00000001528	CHERP	81	70.330	Octodon_degus
ENSDARG00000021812	cherp	100	78.519	ENSONIG00000007686	cherp	100	71.845	Oreochromis_niloticus
ENSDARG00000021812	cherp	100	81.439	ENSORLG00000000138	cherp	100	71.522	Oryzias_latipes
ENSDARG00000021812	cherp	100	81.061	ENSORLG00020013142	cherp	100	71.413	Oryzias_latipes_hni
ENSDARG00000021812	cherp	100	81.439	ENSORLG00015008911	cherp	100	71.194	Oryzias_latipes_hsok
ENSDARG00000021812	cherp	100	81.061	ENSOMEG00000016947	cherp	100	71.742	Oryzias_melastigma
ENSDARG00000021812	cherp	100	73.106	ENSOGAG00000005834	CHERP	99	66.558	Otolemur_garnettii
ENSDARG00000021812	cherp	100	51.698	ENSOARG00000018876	CHERP	78	61.801	Ovis_aries
ENSDARG00000021812	cherp	100	74.638	ENSPPAG00000029195	CHERP	99	66.880	Pan_paniscus
ENSDARG00000021812	cherp	100	72.894	ENSPPRG00000003275	CHERP	99	66.774	Panthera_pardus
ENSDARG00000021812	cherp	84	78.037	ENSPTIG00000019778	CHERP	99	56.935	Panthera_tigris_altaica
ENSDARG00000021812	cherp	100	78.113	ENSPTRG00000010647	CHERP	99	67.892	Pan_troglodytes
ENSDARG00000021812	cherp	100	73.260	ENSPANG00000011698	CHERP	99	66.916	Papio_anubis
ENSDARG00000021812	cherp	100	76.744	ENSPKIG00000000423	cherp	96	66.592	Paramormyrops_kingsleyae
ENSDARG00000021812	cherp	99	76.336	ENSPSIG00000011974	CHERP	100	66.966	Pelodiscus_sinensis
ENSDARG00000021812	cherp	97	76.265	ENSPMGG00000023606	cherp	99	64.187	Periophthalmus_magnuspinnatus
ENSDARG00000021812	cherp	100	72.464	ENSPEMG00000011238	Cherp	99	66.384	Peromyscus_maniculatus_bairdii
ENSDARG00000021812	cherp	98	53.333	ENSPMAG00000001655	-	97	52.663	Petromyzon_marinus
ENSDARG00000021812	cherp	100	75.836	ENSPCIG00000019615	CHERP	95	67.201	Phascolarctos_cinereus
ENSDARG00000021812	cherp	100	81.783	ENSPFOG00000016899	cherp	100	71.106	Poecilia_formosa
ENSDARG00000021812	cherp	100	80.620	ENSPLAG00000003350	cherp	87	81.988	Poecilia_latipinna
ENSDARG00000021812	cherp	87	70.980	ENSPMEG00000002214	cherp	75	75.514	Poecilia_mexicana
ENSDARG00000021812	cherp	100	82.171	ENSPREG00000020774	cherp	99	71.175	Poecilia_reticulata
ENSDARG00000021812	cherp	100	77.481	ENSPPYG00000009691	CHERP	99	65.355	Pongo_abelii
ENSDARG00000021812	cherp	100	76.692	ENSPCAG00000001337	CHERP	90	82.979	Procavia_capensis
ENSDARG00000021812	cherp	72	63.406	ENSPCOG00000022788	CHERP	99	85.075	Propithecus_coquereli
ENSDARG00000021812	cherp	100	77.481	ENSPVAG00000004320	CHERP	90	82.979	Pteropus_vampyrus
ENSDARG00000021812	cherp	100	79.767	ENSPNYG00000003942	cherp	100	73.851	Pundamilia_nyererei
ENSDARG00000021812	cherp	100	85.490	ENSPNAG00000017179	cherp	100	79.025	Pygocentrus_nattereri
ENSDARG00000021812	cherp	100	75.472	ENSRNOG00000012323	Cherp	99	67.167	Rattus_norvegicus
ENSDARG00000021812	cherp	100	76.718	ENSRBIG00000038621	CHERP	99	68.004	Rhinopithecus_bieti
ENSDARG00000021812	cherp	100	73.260	ENSRROG00000040770	CHERP	99	66.916	Rhinopithecus_roxellana
ENSDARG00000021812	cherp	100	74.638	ENSSBOG00000014492	CHERP	99	66.987	Saimiri_boliviensis_boliviensis
ENSDARG00000021812	cherp	97	77.011	ENSSHAG00000010752	CHERP	99	66.410	Sarcophilus_harrisii
ENSDARG00000021812	cherp	99	77.734	ENSSFOG00015008022	cherp	84	79.193	Scleropages_formosus
ENSDARG00000021812	cherp	100	74.088	ENSSMAG00000005362	cherp	100	70.664	Scophthalmus_maximus
ENSDARG00000021812	cherp	100	78.599	ENSSDUG00000019712	cherp	100	71.627	Seriola_dumerili
ENSDARG00000021812	cherp	100	78.988	ENSSLDG00000012659	cherp	100	72.354	Seriola_lalandi_dorsalis
ENSDARG00000021812	cherp	100	77.043	ENSSPUG00000008901	CHERP	99	67.845	Sphenodon_punctatus
ENSDARG00000021812	cherp	100	78.210	ENSSPAG00000010681	cherp	100	71.582	Stegastes_partitus
ENSDARG00000021812	cherp	100	75.954	ENSSSCG00000013860	CHERP	99	67.822	Sus_scrofa
ENSDARG00000021812	cherp	100	74.340	ENSTGUG00000000680	CHERP	99	66.203	Taeniopygia_guttata
ENSDARG00000021812	cherp	100	78.599	ENSTRUG00000007429	cherp	100	68.650	Takifugu_rubripes
ENSDARG00000021812	cherp	100	76.265	ENSTNIG00000003363	cherp	79	72.045	Tetraodon_nigroviridis
ENSDARG00000021812	cherp	62	83.784	ENSTTRG00000015006	CHERP	89	67.188	Tursiops_truncatus
ENSDARG00000021812	cherp	100	76.336	ENSUAMG00000017295	CHERP	80	68.889	Ursus_americanus
ENSDARG00000021812	cherp	98	68.889	ENSUMAG00000000965	CHERP	70	71.617	Ursus_maritimus
ENSDARG00000021812	cherp	100	72.894	ENSVVUG00000016546	CHERP	99	66.525	Vulpes_vulpes
ENSDARG00000021812	cherp	100	72.932	ENSXETG00000002072	cherp	97	63.656	Xenopus_tropicalis
ENSDARG00000021812	cherp	100	79.699	ENSXCOG00000005936	cherp	87	80.422	Xiphophorus_couchianus
ENSDARG00000021812	cherp	100	82.171	ENSXMAG00000008026	cherp	86	82.407	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0006396	RNA processing	-	IEA	Process
GO:0006874	cellular calcium ion homeostasis	-	IEA	Process