EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000022410 (Gene tree)
Gene ID: 563195
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 26859 bases
Position: chr13:31343326-31370184
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000035419	NUC173	PF08161.12	4.1e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000130035	-	773	-	-	- (aa)	-	-
ENSDART00000034829	-	4193	-	ENSDARP00000035419	1283 (aa)	-	B8A4E7
ENSDART00000145887	-	913	-	ENSDARP00000118584	276 (aa)	-	B8A5Y5
ENSDART00000134343	-	573	-	ENSDARP00000115270	100 (aa)	-	F1Q8D9

Gene Model

Click here to download ENSDARG00000022410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000022410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000022410	rrp12	97	67.816	ENSG00000052749	RRP12	100	76.136	Homo_sapiens
ENSDARG00000022410	rrp12	99	72.840	ENSAPOG00000013355	rrp12	99	71.582	Acanthochromis_polyacanthus
ENSDARG00000022410	rrp12	99	61.064	ENSAMEG00000000134	RRP12	99	61.201	Ailuropoda_melanoleuca
ENSDARG00000022410	rrp12	99	73.729	ENSACIG00000022673	rrp12	99	73.447	Amphilophus_citrinellus
ENSDARG00000022410	rrp12	99	75.136	ENSAOCG00000016149	rrp12	99	74.671	Amphiprion_ocellaris
ENSDARG00000022410	rrp12	99	73.988	ENSAPEG00000016023	rrp12	99	73.027	Amphiprion_percula
ENSDARG00000022410	rrp12	99	73.323	ENSATEG00000022627	rrp12	99	72.791	Anabas_testudineus
ENSDARG00000022410	rrp12	96	57.748	ENSAPLG00000014387	RRP12	99	57.928	Anas_platyrhynchos
ENSDARG00000022410	rrp12	99	59.583	ENSACAG00000002175	RRP12	99	59.583	Anolis_carolinensis
ENSDARG00000022410	rrp12	92	73.684	ENSANAG00000037485	RRP12	99	67.241	Aotus_nancymaae
ENSDARG00000022410	rrp12	99	73.906	ENSACLG00000007354	rrp12	99	73.623	Astatotilapia_calliptera
ENSDARG00000022410	rrp12	100	78.477	ENSAMXG00000012852	rrp12	100	78.166	Astyanax_mexicanus
ENSDARG00000022410	rrp12	97	64.773	ENSBTAG00000002191	RRP12	99	66.477	Bos_taurus
ENSDARG00000022410	rrp12	85	59.054	ENSCJAG00000016549	-	99	58.690	Callithrix_jacchus
ENSDARG00000022410	rrp12	99	61.402	ENSCAFG00000009043	RRP12	99	60.846	Canis_familiaris
ENSDARG00000022410	rrp12	99	61.402	ENSCAFG00020005991	RRP12	99	60.846	Canis_lupus_dingo
ENSDARG00000022410	rrp12	99	59.004	ENSCHIG00000011876	RRP12	99	58.837	Capra_hircus
ENSDARG00000022410	rrp12	53	53.602	ENSTSYG00000030210	-	99	53.026	Carlito_syrichta
ENSDARG00000022410	rrp12	96	55.422	ENSCAPG00000008991	RRP12	98	55.261	Cavia_aperea
ENSDARG00000022410	rrp12	99	60.728	ENSCPOG00000004215	RRP12	99	60.651	Cavia_porcellus
ENSDARG00000022410	rrp12	70	55.446	ENSCCAG00000033123	-	82	54.895	Cebus_capucinus
ENSDARG00000022410	rrp12	84	64.645	ENSCCAG00000024088	RRP12	97	65.649	Cebus_capucinus
ENSDARG00000022410	rrp12	99	57.506	ENSCATG00000045310	RRP12	99	57.494	Cercocebus_atys
ENSDARG00000022410	rrp12	99	60.449	ENSCLAG00000003753	RRP12	99	59.969	Chinchilla_lanigera
ENSDARG00000022410	rrp12	88	59.825	ENSCSAG00000005877	RRP12	99	59.424	Chlorocebus_sabaeus
ENSDARG00000022410	rrp12	58	68.114	ENSCHOG00000003095	-	59	68.614	Choloepus_hoffmanni
ENSDARG00000022410	rrp12	94	61.779	ENSCPBG00000011935	RRP12	97	61.595	Chrysemys_picta_bellii
ENSDARG00000022410	rrp12	64	38.843	ENSCSAVG00000006059	-	99	38.107	Ciona_savignyi
ENSDARG00000022410	rrp12	92	73.026	ENSCANG00000031653	RRP12	99	68.391	Colobus_angolensis_palliatus
ENSDARG00000022410	rrp12	90	61.709	ENSCGRG00001004338	Rrp12	99	61.026	Cricetulus_griseus_chok1gshd
ENSDARG00000022410	rrp12	99	61.253	ENSCGRG00000011965	Rrp12	99	60.634	Cricetulus_griseus_crigri
ENSDARG00000022410	rrp12	100	72.734	ENSCSEG00000007799	rrp12	100	72.734	Cynoglossus_semilaevis
ENSDARG00000022410	rrp12	99	74.317	ENSCVAG00000003418	rrp12	99	74.011	Cyprinodon_variegatus
ENSDARG00000022410	rrp12	99	60.340	ENSDNOG00000005120	RRP12	99	61.111	Dasypus_novemcinctus
ENSDARG00000022410	rrp12	99	60.678	ENSDORG00000009199	Rrp12	99	60.910	Dipodomys_ordii
ENSDARG00000022410	rrp12	93	58.333	ENSETEG00000002455	RRP12	88	59.036	Echinops_telfairi
ENSDARG00000022410	rrp12	89	66.102	ENSEBUG00000006555	rrp12	99	43.038	Eptatretus_burgeri
ENSDARG00000022410	rrp12	99	61.467	ENSEASG00005008693	RRP12	99	61.295	Equus_asinus_asinus
ENSDARG00000022410	rrp12	94	61.380	ENSECAG00000010892	RRP12	99	61.198	Equus_caballus
ENSDARG00000022410	rrp12	69	50.575	ENSEEUG00000005447	-	63	57.353	Erinaceus_europaeus
ENSDARG00000022410	rrp12	99	72.791	ENSELUG00000010510	rrp12	99	72.789	Esox_lucius
ENSDARG00000022410	rrp12	97	67.816	ENSFCAG00000028639	RRP12	99	67.816	Felis_catus
ENSDARG00000022410	rrp12	94	61.475	ENSFALG00000008458	RRP12	99	61.475	Ficedula_albicollis
ENSDARG00000022410	rrp12	99	60.759	ENSFDAG00000019108	RRP12	95	60.201	Fukomys_damarensis
ENSDARG00000022410	rrp12	99	67.941	ENSFHEG00000004148	rrp12	99	66.977	Fundulus_heteroclitus
ENSDARG00000022410	rrp12	99	65.214	ENSGMOG00000004188	rrp12	99	64.660	Gadus_morhua
ENSDARG00000022410	rrp12	99	61.318	ENSGALG00000041331	RRP12	95	62.684	Gallus_gallus
ENSDARG00000022410	rrp12	99	74.415	ENSGAFG00000009038	rrp12	99	73.974	Gambusia_affinis
ENSDARG00000022410	rrp12	99	71.562	ENSGACG00000007175	rrp12	99	71.040	Gasterosteus_aculeatus
ENSDARG00000022410	rrp12	67	66.090	ENSGAGG00000019169	RRP12	96	66.090	Gopherus_agassizii
ENSDARG00000022410	rrp12	97	67.816	ENSGGOG00000014850	RRP12	99	67.816	Gorilla_gorilla
ENSDARG00000022410	rrp12	99	73.984	ENSHBUG00000023527	rrp12	99	73.701	Haplochromis_burtoni
ENSDARG00000022410	rrp12	99	60.449	ENSHGLG00000016772	RRP12	99	60.124	Heterocephalus_glaber_female
ENSDARG00000022410	rrp12	99	60.449	ENSHGLG00100015110	RRP12	99	60.124	Heterocephalus_glaber_male
ENSDARG00000022410	rrp12	100	70.419	ENSHCOG00000019519	rrp12	100	70.186	Hippocampus_comes
ENSDARG00000022410	rrp12	94	86.441	ENSIPUG00000000311	RRP12	100	76.708	Ictalurus_punctatus
ENSDARG00000022410	rrp12	99	61.610	ENSSTOG00000006515	RRP12	99	60.974	Ictidomys_tridecemlineatus
ENSDARG00000022410	rrp12	96	60.866	ENSJJAG00000000110	Rrp12	99	60.528	Jaculus_jaculus
ENSDARG00000022410	rrp12	99	73.458	ENSKMAG00000020621	rrp12	99	73.333	Kryptolebias_marmoratus
ENSDARG00000022410	rrp12	100	69.852	ENSLBEG00000015335	rrp12	100	69.505	Labrus_bergylta
ENSDARG00000022410	rrp12	72	63.296	ENSLACG00000016633	RRP12	81	63.296	Latimeria_chalumnae
ENSDARG00000022410	rrp12	100	68.178	ENSLOCG00000003846	rrp12	100	67.871	Lepisosteus_oculatus
ENSDARG00000022410	rrp12	99	61.017	ENSLAFG00000015965	RRP12	99	60.692	Loxodonta_africana
ENSDARG00000022410	rrp12	92	73.026	ENSMFAG00000041558	RRP12	99	68.391	Macaca_fascicularis
ENSDARG00000022410	rrp12	92	73.026	ENSMMUG00000019634	RRP12	99	68.391	Macaca_mulatta
ENSDARG00000022410	rrp12	92	73.026	ENSMNEG00000036759	RRP12	99	68.391	Macaca_nemestrina
ENSDARG00000022410	rrp12	92	71.711	ENSMLEG00000041317	RRP12	99	57.950	Mandrillus_leucophaeus
ENSDARG00000022410	rrp12	99	72.422	ENSMAMG00000002964	rrp12	99	74.565	Mastacembelus_armatus
ENSDARG00000022410	rrp12	99	73.984	ENSMZEG00005003241	rrp12	99	73.701	Maylandia_zebra
ENSDARG00000022410	rrp12	99	60.138	ENSMGAG00000009829	RRP12	99	60.292	Meleagris_gallopavo
ENSDARG00000022410	rrp12	99	59.165	ENSMAUG00000020743	Rrp12	99	58.855	Mesocricetus_auratus
ENSDARG00000022410	rrp12	97	68.000	ENSMICG00000007624	RRP12	99	68.000	Microcebus_murinus
ENSDARG00000022410	rrp12	99	62.056	ENSMOCG00000006753	Rrp12	99	61.497	Microtus_ochrogaster
ENSDARG00000022410	rrp12	99	71.196	ENSMMOG00000010708	rrp12	99	71.196	Mola_mola
ENSDARG00000022410	rrp12	99	61.300	ENSMODG00000004315	RRP12	99	61.115	Monodelphis_domestica
ENSDARG00000022410	rrp12	99	68.200	ENSMALG00000016560	rrp12	99	72.420	Monopterus_albus
ENSDARG00000022410	rrp12	99	61.320	MGP_CAROLIEiJ_G0022957	Rrp12	99	60.766	Mus_caroli
ENSDARG00000022410	rrp12	99	61.669	ENSMUSG00000035049	Rrp12	99	61.111	Mus_musculus
ENSDARG00000022410	rrp12	99	61.747	MGP_PahariEiJ_G0014447	Rrp12	99	61.111	Mus_pahari
ENSDARG00000022410	rrp12	99	61.592	MGP_SPRETEiJ_G0023878	Rrp12	99	61.188	Mus_spretus
ENSDARG00000022410	rrp12	99	61.034	ENSMPUG00000017046	RRP12	99	61.017	Mustela_putorius_furo
ENSDARG00000022410	rrp12	99	61.261	ENSMLUG00000017160	RRP12	99	61.337	Myotis_lucifugus
ENSDARG00000022410	rrp12	99	61.978	ENSNGAG00000024144	Rrp12	99	61.669	Nannospalax_galili
ENSDARG00000022410	rrp12	99	72.400	ENSNBRG00000009987	rrp12	99	71.894	Neolamprologus_brichardi
ENSDARG00000022410	rrp12	97	67.816	ENSNLEG00000013762	RRP12	99	67.816	Nomascus_leucogenys
ENSDARG00000022410	rrp12	99	55.322	ENSMEUG00000003185	RRP12	99	55.400	Notamacropus_eugenii
ENSDARG00000022410	rrp12	94	63.773	ENSOPRG00000005001	RRP12	94	63.773	Ochotona_princeps
ENSDARG00000022410	rrp12	99	60.279	ENSODEG00000016439	RRP12	99	59.322	Octodon_degus
ENSDARG00000022410	rrp12	99	74.141	ENSONIG00000009528	rrp12	99	73.933	Oreochromis_niloticus
ENSDARG00000022410	rrp12	99	57.198	ENSOANG00000006560	RRP12	99	57.231	Ornithorhynchus_anatinus
ENSDARG00000022410	rrp12	99	61.455	ENSOCUG00000005662	RRP12	99	61.223	Oryctolagus_cuniculus
ENSDARG00000022410	rrp12	99	72.756	ENSORLG00000008688	rrp12	99	72.250	Oryzias_latipes
ENSDARG00000022410	rrp12	98	72.893	ENSORLG00020002355	rrp12	99	72.576	Oryzias_latipes_hni
ENSDARG00000022410	rrp12	99	72.891	ENSORLG00015006709	rrp12	99	72.347	Oryzias_latipes_hsok
ENSDARG00000022410	rrp12	98	73.349	ENSOMEG00000002609	rrp12	99	73.175	Oryzias_melastigma
ENSDARG00000022410	rrp12	99	61.017	ENSOGAG00000001626	RRP12	99	60.692	Otolemur_garnettii
ENSDARG00000022410	rrp12	99	60.092	ENSOARG00000009681	RRP12	99	59.846	Ovis_aries
ENSDARG00000022410	rrp12	97	67.816	ENSPPAG00000043885	RRP12	99	67.816	Pan_paniscus
ENSDARG00000022410	rrp12	97	67.241	ENSPPRG00000002029	RRP12	99	67.241	Panthera_pardus
ENSDARG00000022410	rrp12	97	67.816	ENSPTIG00000004428	RRP12	99	67.816	Panthera_tigris_altaica
ENSDARG00000022410	rrp12	97	67.816	ENSPTRG00000002806	RRP12	99	67.816	Pan_troglodytes
ENSDARG00000022410	rrp12	92	71.711	ENSPANG00000021360	RRP12	99	68.391	Papio_anubis
ENSDARG00000022410	rrp12	99	70.402	ENSPKIG00000016516	rrp12	99	70.325	Paramormyrops_kingsleyae
ENSDARG00000022410	rrp12	99	71.819	ENSPMGG00000020217	rrp12	99	71.140	Periophthalmus_magnuspinnatus
ENSDARG00000022410	rrp12	99	62.143	ENSPEMG00000008437	Rrp12	99	61.835	Peromyscus_maniculatus_bairdii
ENSDARG00000022410	rrp12	99	45.991	ENSPMAG00000007493	rrp12	79	54.589	Petromyzon_marinus
ENSDARG00000022410	rrp12	96	73.154	ENSPCIG00000002157	RRP12	96	73.154	Phascolarctos_cinereus
ENSDARG00000022410	rrp12	99	73.791	ENSPFOG00000014975	rrp12	99	73.354	Poecilia_formosa
ENSDARG00000022410	rrp12	99	73.791	ENSPLAG00000009840	rrp12	99	73.354	Poecilia_latipinna
ENSDARG00000022410	rrp12	99	73.791	ENSPMEG00000021871	rrp12	99	73.354	Poecilia_mexicana
ENSDARG00000022410	rrp12	99	71.384	ENSPREG00000020950	rrp12	99	70.866	Poecilia_reticulata
ENSDARG00000022410	rrp12	99	60.725	ENSPPYG00000002528	RRP12	99	60.401	Pongo_abelii
ENSDARG00000022410	rrp12	94	75.141	ENSPCAG00000008967	RRP12	94	75.141	Procavia_capensis
ENSDARG00000022410	rrp12	97	66.667	ENSPCOG00000014009	RRP12	99	66.667	Propithecus_coquereli
ENSDARG00000022410	rrp12	99	58.687	ENSPVAG00000003370	RRP12	99	58.288	Pteropus_vampyrus
ENSDARG00000022410	rrp12	99	74.141	ENSPNYG00000009451	rrp12	99	73.856	Pundamilia_nyererei
ENSDARG00000022410	rrp12	100	79.082	ENSPNAG00000007658	rrp12	100	79.005	Pygocentrus_nattereri
ENSDARG00000022410	rrp12	99	61.640	ENSRNOG00000048495	Rrp12	99	61.081	Rattus_norvegicus
ENSDARG00000022410	rrp12	92	73.026	ENSRBIG00000021296	RRP12	99	68.391	Rhinopithecus_bieti
ENSDARG00000022410	rrp12	92	73.026	ENSRROG00000032482	RRP12	99	68.391	Rhinopithecus_roxellana
ENSDARG00000022410	rrp12	92	73.026	ENSSBOG00000030992	RRP12	100	66.667	Saimiri_boliviensis_boliviensis
ENSDARG00000022410	rrp12	99	61.055	ENSSHAG00000018275	RRP12	99	60.900	Sarcophilus_harrisii
ENSDARG00000022410	rrp12	99	72.883	ENSSFOG00015016400	rrp12	99	72.261	Scleropages_formosus
ENSDARG00000022410	rrp12	99	73.302	ENSSMAG00000004047	rrp12	99	73.566	Scophthalmus_maximus
ENSDARG00000022410	rrp12	99	73.536	ENSSDUG00000022871	rrp12	99	73.333	Seriola_dumerili
ENSDARG00000022410	rrp12	99	73.380	ENSSLDG00000003038	rrp12	99	73.256	Seriola_lalandi_dorsalis
ENSDARG00000022410	rrp12	99	59.274	ENSSPUG00000012221	RRP12	99	59.428	Sphenodon_punctatus
ENSDARG00000022410	rrp12	99	74.825	ENSSPAG00000002261	rrp12	99	74.516	Stegastes_partitus
ENSDARG00000022410	rrp12	99	60.896	ENSSSCG00000010514	RRP12	99	60.340	Sus_scrofa
ENSDARG00000022410	rrp12	88	58.736	ENSTGUG00000009711	RRP12	99	58.896	Taeniopygia_guttata
ENSDARG00000022410	rrp12	99	68.818	ENSTRUG00000012017	rrp12	99	68.118	Takifugu_rubripes
ENSDARG00000022410	rrp12	100	73.137	ENSTNIG00000016522	rrp12	100	73.059	Tetraodon_nigroviridis
ENSDARG00000022410	rrp12	77	75.490	ENSTBEG00000004907	RRP12	80	75.490	Tupaia_belangeri
ENSDARG00000022410	rrp12	99	58.855	ENSTTRG00000009878	RRP12	99	58.314	Tursiops_truncatus
ENSDARG00000022410	rrp12	99	61.355	ENSUAMG00000009092	RRP12	99	61.337	Ursus_americanus
ENSDARG00000022410	rrp12	99	59.397	ENSUMAG00000021621	RRP12	99	59.493	Ursus_maritimus
ENSDARG00000022410	rrp12	99	61.598	ENSVVUG00000023168	RRP12	99	61.133	Vulpes_vulpes
ENSDARG00000022410	rrp12	99	65.204	ENSXETG00000003430	rrp12	99	64.988	Xenopus_tropicalis
ENSDARG00000022410	rrp12	90	74.224	ENSXCOG00000012082	rrp12	99	69.675	Xiphophorus_couchianus
ENSDARG00000022410	rrp12	99	74.181	ENSXMAG00000013498	rrp12	99	73.819	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0008150	biological_process	-	ND	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component