EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000022952 (Gene tree)
Gene ID: 327401
Gene Symbol: zgc:66448
Alias: fi06b05|wu:fi06b05
Full Name: zgc:66448
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8129 bases
Position: chr16:25107344-25115472
Accession: ZDB-GENE-030131-5612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	1	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	2	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	3	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	4	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	5	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	6	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	7	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	8	9
ENSDARP00000036300	zf-C2H2	PF00096.26	1.1e-46	9	9
ENSDARP00000036300	zf-met	PF12874.7	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000033211	-	4260	-	ENSDARP00000036300	1356 (aa)	-	F1QDA0

Gene Model

Click here to download ENSDARG00000022952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000022952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000022952	zgc:66448	50	60.508	ENSAMXG00000036663	zgc:66448	86	49.000	Astyanax_mexicanus
ENSDARG00000022952	zgc:66448	58	44.254	ENSGAFG00000003391	zgc:66448	59	44.499	Gambusia_affinis
ENSDARG00000022952	zgc:66448	81	49.366	ENSIPUG00000002548	zgc:66448	88	48.270	Ictalurus_punctatus
ENSDARG00000022952	zgc:66448	80	40.728	ENSORLG00015018781	zgc:66448	68	48.023	Oryzias_latipes_hsok
ENSDARG00000022952	zgc:66448	83	40.354	ENSOMEG00000010575	zgc:66448	97	42.326	Oryzias_melastigma
ENSDARG00000022952	zgc:66448	83	41.230	ENSSMAG00000001305	zgc:66448	88	41.500	Scophthalmus_maximus
ENSDARG00000022952	zgc:66448	54	45.032	ENSXMAG00000022364	zgc:66448	57	45.111	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function