EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000024465 (Gene tree)
Gene ID: 558080
Gene Symbol: mrps18a
Alias: si:ch211-117l16.3|zgc:152724
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2471 bases
Position: chr4:5642696-5645166
Accession: ZDB-GENE-041210-109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000037794	Ribosomal_S18	PF01084.20	9.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000150847	-	610	-	-	- (aa)	-	-
ENSDART00000028941	-	904	-	ENSDARP00000037794	210 (aa)	-	Q5TYW5

Gene Model

Click here to download ENSDARG00000024465's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000024465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000024465	mrps18a	80	65.476	ENSG00000096080	MRPS18A	85	64.286	Homo_sapiens
ENSDARG00000024465	mrps18a	80	66.071	ENSAMEG00000012117	MRPS18A	85	64.881	Ailuropoda_melanoleuca
ENSDARG00000024465	mrps18a	100	68.545	ENSACIG00000017782	mrps18a	100	66.667	Amphilophus_citrinellus
ENSDARG00000024465	mrps18a	59	59.677	ENSAOCG00000005723	mrps18a	55	75.269	Amphiprion_ocellaris
ENSDARG00000024465	mrps18a	100	63.033	ENSAPEG00000006971	mrps18a	100	61.137	Amphiprion_percula
ENSDARG00000024465	mrps18a	100	67.130	ENSATEG00000003132	mrps18a	100	65.741	Anabas_testudineus
ENSDARG00000024465	mrps18a	76	67.500	ENSAPLG00000016280	MRPS18A	100	65.625	Anas_platyrhynchos
ENSDARG00000024465	mrps18a	79	66.061	ENSACAG00000000642	MRPS18A	85	65.455	Anolis_carolinensis
ENSDARG00000024465	mrps18a	80	65.476	ENSANAG00000030889	MRPS18A	85	64.286	Aotus_nancymaae
ENSDARG00000024465	mrps18a	100	65.714	ENSACLG00000008170	mrps18a	100	63.810	Astatotilapia_calliptera
ENSDARG00000024465	mrps18a	100	63.333	ENSAMXG00000036348	mrps18a	100	63.333	Astyanax_mexicanus
ENSDARG00000024465	mrps18a	54	84.211	ENSAMXG00000036055	-	84	84.211	Astyanax_mexicanus
ENSDARG00000024465	mrps18a	80	64.881	ENSBTAG00000025571	MRPS18A	85	64.286	Bos_taurus
ENSDARG00000024465	mrps18a	90	59.162	ENSCJAG00000017382	MRPS18A	85	64.286	Callithrix_jacchus
ENSDARG00000024465	mrps18a	93	57.868	ENSCAFG00000001928	MRPS18A	99	56.853	Canis_familiaris
ENSDARG00000024465	mrps18a	93	58.376	ENSCAFG00020012064	MRPS18A	83	57.360	Canis_lupus_dingo
ENSDARG00000024465	mrps18a	80	64.881	ENSCHIG00000013039	MRPS18A	85	64.286	Capra_hircus
ENSDARG00000024465	mrps18a	80	64.286	ENSTSYG00000001390	MRPS18A	85	63.095	Carlito_syrichta
ENSDARG00000024465	mrps18a	74	61.146	ENSCAPG00000016029	MRPS18A	95	59.873	Cavia_aperea
ENSDARG00000024465	mrps18a	80	62.500	ENSCPOG00000022949	MRPS18A	85	61.310	Cavia_porcellus
ENSDARG00000024465	mrps18a	79	65.060	ENSCCAG00000021108	MRPS18A	84	63.855	Cebus_capucinus
ENSDARG00000024465	mrps18a	80	64.286	ENSCATG00000012963	MRPS18A	85	63.095	Cercocebus_atys
ENSDARG00000024465	mrps18a	88	58.919	ENSCLAG00000012929	MRPS18A	93	57.838	Chinchilla_lanigera
ENSDARG00000024465	mrps18a	80	64.286	ENSCSAG00000012127	MRPS18A	85	63.095	Chlorocebus_sabaeus
ENSDARG00000024465	mrps18a	80	64.072	ENSCPBG00000025243	MRPS18A	85	62.275	Chrysemys_picta_bellii
ENSDARG00000024465	mrps18a	83	34.270	ENSCING00000024771	-	89	33.708	Ciona_intestinalis
ENSDARG00000024465	mrps18a	70	39.333	ENSCSAVG00000009539	-	83	38.667	Ciona_savignyi
ENSDARG00000024465	mrps18a	79	64.458	ENSCANG00000039873	MRPS18A	84	63.253	Colobus_angolensis_palliatus
ENSDARG00000024465	mrps18a	73	61.039	ENSCGRG00001017882	Mrps18a	87	60.390	Cricetulus_griseus_chok1gshd
ENSDARG00000024465	mrps18a	80	48.503	ENSCGRG00000000079	Mrps18a	85	47.904	Cricetulus_griseus_crigri
ENSDARG00000024465	mrps18a	100	62.963	ENSCSEG00000019650	mrps18a	100	58.065	Cynoglossus_semilaevis
ENSDARG00000024465	mrps18a	100	66.825	ENSCVAG00000006511	mrps18a	100	64.929	Cyprinodon_variegatus
ENSDARG00000024465	mrps18a	80	64.881	ENSDNOG00000035755	MRPS18A	84	63.690	Dasypus_novemcinctus
ENSDARG00000024465	mrps18a	80	64.881	ENSDORG00000014583	Mrps18a	85	63.690	Dipodomys_ordii
ENSDARG00000024465	mrps18a	60	35.606	FBgn0051450	mRpS18A	82	35.606	Drosophila_melanogaster
ENSDARG00000024465	mrps18a	71	52.406	ENSETEG00000014171	MRPS18A	100	51.337	Echinops_telfairi
ENSDARG00000024465	mrps18a	76	63.750	ENSEASG00005003485	MRPS18A	58	62.500	Equus_asinus_asinus
ENSDARG00000024465	mrps18a	76	63.125	ENSECAG00000004870	MRPS18A	58	62.500	Equus_caballus
ENSDARG00000024465	mrps18a	100	70.142	ENSELUG00000005253	mrps18a	100	68.720	Esox_lucius
ENSDARG00000024465	mrps18a	80	66.667	ENSFCAG00000036031	MRPS18A	85	65.476	Felis_catus
ENSDARG00000024465	mrps18a	80	65.269	ENSFALG00000011356	MRPS18A	86	63.473	Ficedula_albicollis
ENSDARG00000024465	mrps18a	76	59.627	ENSFDAG00000012875	MRPS18A	71	63.194	Fukomys_damarensis
ENSDARG00000024465	mrps18a	100	66.825	ENSFHEG00000009014	mrps18a	100	64.929	Fundulus_heteroclitus
ENSDARG00000024465	mrps18a	100	64.762	ENSGMOG00000012493	mrps18a	100	63.333	Gadus_morhua
ENSDARG00000024465	mrps18a	58	71.074	ENSGALG00000010296	MRPS18A	74	73.832	Gallus_gallus
ENSDARG00000024465	mrps18a	100	65.403	ENSGAFG00000005211	mrps18a	100	63.507	Gambusia_affinis
ENSDARG00000024465	mrps18a	100	60.476	ENSGACG00000013370	mrps18a	100	59.048	Gasterosteus_aculeatus
ENSDARG00000024465	mrps18a	71	66.443	ENSGAGG00000017954	MRPS18A	79	64.430	Gopherus_agassizii
ENSDARG00000024465	mrps18a	80	65.476	ENSGGOG00000006303	-	85	64.286	Gorilla_gorilla
ENSDARG00000024465	mrps18a	100	65.714	ENSHBUG00000014682	mrps18a	100	63.810	Haplochromis_burtoni
ENSDARG00000024465	mrps18a	91	56.477	ENSHGLG00000014356	MRPS18A	97	56.477	Heterocephalus_glaber_female
ENSDARG00000024465	mrps18a	91	56.477	ENSHGLG00100010988	MRPS18A	97	56.477	Heterocephalus_glaber_male
ENSDARG00000024465	mrps18a	100	65.094	ENSHCOG00000000856	mrps18a	100	63.679	Hippocampus_comes
ENSDARG00000024465	mrps18a	100	73.333	ENSIPUG00000017406	mrps18a	100	73.333	Ictalurus_punctatus
ENSDARG00000024465	mrps18a	80	61.017	ENSSTOG00000004490	MRPS18A	86	61.017	Ictidomys_tridecemlineatus
ENSDARG00000024465	mrps18a	80	63.690	ENSJJAG00000006567	Mrps18a	85	62.500	Jaculus_jaculus
ENSDARG00000024465	mrps18a	100	64.319	ENSKMAG00000014910	mrps18a	100	62.911	Kryptolebias_marmoratus
ENSDARG00000024465	mrps18a	100	64.352	ENSLBEG00000003391	mrps18a	99	62.500	Labrus_bergylta
ENSDARG00000024465	mrps18a	94	52.913	ENSLACG00000022160	mrps18a	99	51.456	Latimeria_chalumnae
ENSDARG00000024465	mrps18a	100	60.190	ENSLOCG00000016008	mrps18a	100	58.294	Lepisosteus_oculatus
ENSDARG00000024465	mrps18a	80	64.327	ENSLAFG00000001168	MRPS18A	86	63.158	Loxodonta_africana
ENSDARG00000024465	mrps18a	80	64.286	ENSMFAG00000038311	MRPS18A	85	63.095	Macaca_fascicularis
ENSDARG00000024465	mrps18a	80	64.286	ENSMMUG00000014749	MRPS18A	85	63.095	Macaca_mulatta
ENSDARG00000024465	mrps18a	80	64.286	ENSMNEG00000044642	MRPS18A	85	63.095	Macaca_nemestrina
ENSDARG00000024465	mrps18a	76	64.375	ENSMLEG00000041828	MRPS18A	100	63.125	Mandrillus_leucophaeus
ENSDARG00000024465	mrps18a	100	67.299	ENSMAMG00000015478	mrps18a	100	65.403	Mastacembelus_armatus
ENSDARG00000024465	mrps18a	100	65.714	ENSMZEG00005014925	mrps18a	100	63.810	Maylandia_zebra
ENSDARG00000024465	mrps18a	80	66.467	ENSMGAG00000010915	MRPS18A	86	64.671	Meleagris_gallopavo
ENSDARG00000024465	mrps18a	80	65.476	ENSMICG00000005062	MRPS18A	85	64.286	Microcebus_murinus
ENSDARG00000024465	mrps18a	83	57.923	ENSMOCG00000015168	-	96	57.377	Microtus_ochrogaster
ENSDARG00000024465	mrps18a	80	64.286	ENSMOCG00000021207	-	85	63.690	Microtus_ochrogaster
ENSDARG00000024465	mrps18a	100	68.571	ENSMMOG00000015248	mrps18a	100	66.667	Mola_mola
ENSDARG00000024465	mrps18a	80	53.555	ENSMODG00000018952	MRPS18A	87	52.607	Monodelphis_domestica
ENSDARG00000024465	mrps18a	100	68.720	ENSMALG00000017044	mrps18a	81	77.181	Monopterus_albus
ENSDARG00000024465	mrps18a	80	63.095	MGP_CAROLIEiJ_G0021656	Mrps18a	85	62.500	Mus_caroli
ENSDARG00000024465	mrps18a	95	55.500	ENSMUSG00000023967	Mrps18a	85	62.500	Mus_musculus
ENSDARG00000024465	mrps18a	80	62.500	MGP_PahariEiJ_G0020648	Mrps18a	85	61.905	Mus_pahari
ENSDARG00000024465	mrps18a	95	55.500	MGP_SPRETEiJ_G0022568	Mrps18a	85	62.500	Mus_spretus
ENSDARG00000024465	mrps18a	80	64.881	ENSMPUG00000012868	MRPS18A	70	63.690	Mustela_putorius_furo
ENSDARG00000024465	mrps18a	79	65.663	ENSMLUG00000017755	MRPS18A	84	64.458	Myotis_lucifugus
ENSDARG00000024465	mrps18a	80	63.690	ENSNGAG00000020052	Mrps18a	86	62.500	Nannospalax_galili
ENSDARG00000024465	mrps18a	100	65.714	ENSNBRG00000021152	mrps18a	100	63.810	Neolamprologus_brichardi
ENSDARG00000024465	mrps18a	80	64.881	ENSNLEG00000003865	MRPS18A	85	63.690	Nomascus_leucogenys
ENSDARG00000024465	mrps18a	80	49.774	ENSMEUG00000013986	MRPS18A	88	48.416	Notamacropus_eugenii
ENSDARG00000024465	mrps18a	80	46.256	ENSOPRG00000007680	MRPS18A	72	66.667	Ochotona_princeps
ENSDARG00000024465	mrps18a	79	65.663	ENSODEG00000015388	MRPS18A	84	64.072	Octodon_degus
ENSDARG00000024465	mrps18a	100	66.190	ENSONIG00000000609	mrps18a	100	64.929	Oreochromis_niloticus
ENSDARG00000024465	mrps18a	74	64.744	ENSOANG00000001955	MRPS18A	97	63.462	Ornithorhynchus_anatinus
ENSDARG00000024465	mrps18a	80	61.310	ENSOCUG00000005544	MRPS18A	85	60.119	Oryctolagus_cuniculus
ENSDARG00000024465	mrps18a	79	77.576	ENSORLG00000023864	mrps18a	79	75.152	Oryzias_latipes
ENSDARG00000024465	mrps18a	79	76.970	ENSORLG00020002882	mrps18a	79	74.545	Oryzias_latipes_hni
ENSDARG00000024465	mrps18a	100	64.623	ENSORLG00015022065	mrps18a	100	62.736	Oryzias_latipes_hsok
ENSDARG00000024465	mrps18a	79	75.758	ENSOMEG00000018124	mrps18a	79	73.939	Oryzias_melastigma
ENSDARG00000024465	mrps18a	86	62.842	ENSOGAG00000026551	MRPS18A	91	61.749	Otolemur_garnettii
ENSDARG00000024465	mrps18a	80	64.881	ENSOARG00000008279	MRPS18A	85	64.286	Ovis_aries
ENSDARG00000024465	mrps18a	80	65.476	ENSPPAG00000036291	MRPS18A	85	64.286	Pan_paniscus
ENSDARG00000024465	mrps18a	80	66.071	ENSPPRG00000006429	MRPS18A	85	64.881	Panthera_pardus
ENSDARG00000024465	mrps18a	80	66.667	ENSPTIG00000001653	MRPS18A	85	65.476	Panthera_tigris_altaica
ENSDARG00000024465	mrps18a	80	65.476	ENSPTRG00000018209	MRPS18A	85	64.286	Pan_troglodytes
ENSDARG00000024465	mrps18a	80	64.286	ENSPANG00000006967	MRPS18A	85	63.095	Papio_anubis
ENSDARG00000024465	mrps18a	100	63.333	ENSPKIG00000012807	mrps18a	88	62.857	Paramormyrops_kingsleyae
ENSDARG00000024465	mrps18a	73	67.033	ENSPSIG00000013672	MRPS18A	85	59.756	Pelodiscus_sinensis
ENSDARG00000024465	mrps18a	100	58.879	ENSPMGG00000000493	mrps18a	100	57.944	Periophthalmus_magnuspinnatus
ENSDARG00000024465	mrps18a	80	65.476	ENSPEMG00000000405	Mrps18a	85	64.881	Peromyscus_maniculatus_bairdii
ENSDARG00000024465	mrps18a	85	59.777	ENSPMAG00000007012	mrps18a	97	58.101	Petromyzon_marinus
ENSDARG00000024465	mrps18a	80	64.286	ENSPCIG00000024858	MRPS18A	85	63.095	Phascolarctos_cinereus
ENSDARG00000024465	mrps18a	76	78.125	ENSPFOG00000009046	mrps18a	100	75.625	Poecilia_formosa
ENSDARG00000024465	mrps18a	100	64.384	ENSPLAG00000011106	mrps18a	100	64.455	Poecilia_latipinna
ENSDARG00000024465	mrps18a	100	63.927	ENSPMEG00000000736	mrps18a	100	63.981	Poecilia_mexicana
ENSDARG00000024465	mrps18a	100	65.403	ENSPREG00000012172	mrps18a	95	63.507	Poecilia_reticulata
ENSDARG00000024465	mrps18a	80	65.476	ENSPPYG00000017282	MRPS18A	85	64.286	Pongo_abelii
ENSDARG00000024465	mrps18a	75	50.725	ENSPCAG00000004192	MRPS18A	99	49.758	Procavia_capensis
ENSDARG00000024465	mrps18a	77	66.258	ENSPCOG00000014911	MRPS18A	82	65.031	Propithecus_coquereli
ENSDARG00000024465	mrps18a	80	68.421	ENSPVAG00000002758	MRPS18A	63	68.421	Pteropus_vampyrus
ENSDARG00000024465	mrps18a	100	65.714	ENSPNYG00000014753	mrps18a	100	63.810	Pundamilia_nyererei
ENSDARG00000024465	mrps18a	100	71.090	ENSPNAG00000023462	mrps18a	100	72.642	Pygocentrus_nattereri
ENSDARG00000024465	mrps18a	80	63.690	ENSRNOG00000019511	Mrps18a	85	63.095	Rattus_norvegicus
ENSDARG00000024465	mrps18a	79	63.855	ENSRBIG00000028789	MRPS18A	84	62.651	Rhinopithecus_bieti
ENSDARG00000024465	mrps18a	79	63.855	ENSRROG00000042368	-	84	62.651	Rhinopithecus_roxellana
ENSDARG00000024465	mrps18a	79	63.855	ENSSBOG00000019943	MRPS18A	84	62.651	Saimiri_boliviensis_boliviensis
ENSDARG00000024465	mrps18a	80	65.476	ENSSHAG00000015048	-	85	64.286	Sarcophilus_harrisii
ENSDARG00000024465	mrps18a	100	62.381	ENSSFOG00015005628	mrps18a	100	60.952	Scleropages_formosus
ENSDARG00000024465	mrps18a	100	64.286	ENSSMAG00000009353	mrps18a	100	62.381	Scophthalmus_maximus
ENSDARG00000024465	mrps18a	71	78.523	ENSSDUG00000011655	mrps18a	82	75.839	Seriola_dumerili
ENSDARG00000024465	mrps18a	100	62.559	ENSSLDG00000025435	mrps18a	100	60.664	Seriola_lalandi_dorsalis
ENSDARG00000024465	mrps18a	80	66.667	ENSSPUG00000011517	MRPS18A	87	64.286	Sphenodon_punctatus
ENSDARG00000024465	mrps18a	100	63.850	ENSSPAG00000000034	mrps18a	100	61.972	Stegastes_partitus
ENSDARG00000024465	mrps18a	80	67.262	ENSSSCG00000001692	MRPS18A	85	66.071	Sus_scrofa
ENSDARG00000024465	mrps18a	71	65.772	ENSTGUG00000008142	MRPS18A	100	63.087	Taeniopygia_guttata
ENSDARG00000024465	mrps18a	79	77.711	ENSTRUG00000025134	mrps18a	79	75.301	Takifugu_rubripes
ENSDARG00000024465	mrps18a	100	65.741	ENSTNIG00000016302	mrps18a	100	63.889	Tetraodon_nigroviridis
ENSDARG00000024465	mrps18a	76	42.152	ENSTBEG00000004094	MRPS18A	70	65.591	Tupaia_belangeri
ENSDARG00000024465	mrps18a	76	68.182	ENSTTRG00000006354	MRPS18A	59	68.182	Tursiops_truncatus
ENSDARG00000024465	mrps18a	80	65.476	ENSUAMG00000013758	MRPS18A	85	64.286	Ursus_americanus
ENSDARG00000024465	mrps18a	80	65.476	ENSUMAG00000005910	MRPS18A	85	64.286	Ursus_maritimus
ENSDARG00000024465	mrps18a	88	59.459	ENSVVUG00000029092	-	93	58.378	Vulpes_vulpes
ENSDARG00000024465	mrps18a	70	54.000	ENSVVUG00000022444	-	68	57.246	Vulpes_vulpes
ENSDARG00000024465	mrps18a	58	62.810	ENSXETG00000003270	mrps18a	79	60.331	Xenopus_tropicalis
ENSDARG00000024465	mrps18a	93	67.179	ENSXCOG00000007223	mrps18a	99	65.128	Xiphophorus_couchianus
ENSDARG00000024465	mrps18a	100	66.190	ENSXMAG00000004867	mrps18a	100	64.286	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function