EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000024687 (Gene tree)
Gene ID: 100000978
Gene Symbol: polr3g
Alias: si:dkey-147l19.2
Full Name: polymerase (RNA) III (DNA directed) polypeptide G
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8711 bases
Position: chr5:48666485-48675195
Accession: ZDB-GENE-081104-312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000032941	RNA_pol_3_Rpc31	PF11705.8	5.6e-30	1	1
ENSDARP00000134978	RNA_pol_3_Rpc31	PF11705.8	8.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000158000	-	3882	XM_021475952	ENSDARP00000134978	214 (aa)	XP_021331627	A0A0R4IMD8
ENSDART00000031141	-	662	-	ENSDARP00000032941	213 (aa)	-	B0R0T5

Gene Model

Click here to download ENSDARG00000024687's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000024687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000024687	polr3g	100	44.749	ENSDARG00000013734	polr3glb	100	46.330
ENSDARG00000024687	polr3g	100	49.550	ENSDARG00000012044	polr3gla	100	49.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000024687	polr3g	100	66.667	ENSAMXG00000014591	polr3g	100	67.757	Astyanax_mexicanus
ENSDARG00000024687	polr3g	95	64.563	ENSELUG00000000740	-	99	63.721	Esox_lucius
ENSDARG00000024687	polr3g	100	70.093	ENSIPUG00000013820	polr3g	100	69.953	Ictalurus_punctatus
ENSDARG00000024687	polr3g	99	58.411	ENSLOCG00000001795	polr3g	98	57.277	Lepisosteus_oculatus
ENSDARG00000024687	polr3g	95	62.745	ENSPKIG00000012724	polr3g	91	64.789	Paramormyrops_kingsleyae
ENSDARG00000024687	polr3g	99	62.553	ENSPNAG00000005454	polr3g	98	61.864	Pygocentrus_nattereri
ENSDARG00000024687	polr3g	99	48.341	ENSSFOG00015016864	-	98	47.867	Scleropages_formosus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process