EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000025011 (Gene tree)
Gene ID: 337236
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 53405 bases
Position: chr10:26515946-26569350
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000122252	Exo_endo_phos	PF03372.23	7.2e-14	1	1
ENSDARP00000122252	DUF1866	PF08952.11	1.8e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000139056	-	759	-	-	- (aa)	-	-
ENSDART00000134276	-	7800	XM_005155357	ENSDARP00000122252	1308 (aa)	XP_005155414	E9QHF3

Gene Model

Click here to download ENSDARG00000025011's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00562	Inositol phosphate metabolism	KEGG
dre01100	Metabolic pathways	KEGG
dre04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000025011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000025011	synj1	100	71.589	ENSG00000159082	SYNJ1	100	82.270	Homo_sapiens
ENSDARG00000025011	synj1	100	80.355	ENSAPOG00000002809	synj1	100	80.250	Acanthochromis_polyacanthus
ENSDARG00000025011	synj1	96	69.085	ENSAMEG00000015028	SYNJ1	68	77.646	Ailuropoda_melanoleuca
ENSDARG00000025011	synj1	99	81.439	ENSACIG00000008857	synj1	99	81.411	Amphilophus_citrinellus
ENSDARG00000025011	synj1	100	83.459	ENSAOCG00000009835	synj1	98	83.282	Amphiprion_ocellaris
ENSDARG00000025011	synj1	100	83.157	ENSAPEG00000021010	synj1	79	82.958	Amphiprion_percula
ENSDARG00000025011	synj1	100	83.710	ENSATEG00000002306	synj1	79	83.258	Anabas_testudineus
ENSDARG00000025011	synj1	97	67.259	ENSAPLG00000011832	SYNJ1	69	76.916	Anas_platyrhynchos
ENSDARG00000025011	synj1	100	68.099	ENSACAG00000003006	-	84	77.748	Anolis_carolinensis
ENSDARG00000025011	synj1	100	68.630	ENSANAG00000027325	SYNJ1	85	77.314	Aotus_nancymaae
ENSDARG00000025011	synj1	100	82.491	ENSACLG00000002255	synj1	100	82.095	Astatotilapia_calliptera
ENSDARG00000025011	synj1	99	88.727	ENSAMXG00000008208	synj1	81	88.200	Astyanax_mexicanus
ENSDARG00000025011	synj1	95	73.580	ENSBTAG00000003063	SYNJ1	83	77.869	Bos_taurus
ENSDARG00000025011	synj1	100	70.699	ENSCJAG00000009187	SYNJ1	84	77.646	Callithrix_jacchus
ENSDARG00000025011	synj1	96	72.274	ENSCAFG00000009041	SYNJ1	99	70.522	Canis_familiaris
ENSDARG00000025011	synj1	96	72.621	ENSCAFG00020025776	SYNJ1	83	70.770	Canis_lupus_dingo
ENSDARG00000025011	synj1	97	72.339	ENSCHIG00000005095	SYNJ1	72	77.596	Capra_hircus
ENSDARG00000025011	synj1	96	72.157	ENSTSYG00000014541	SYNJ1	85	76.993	Carlito_syrichta
ENSDARG00000025011	synj1	91	63.748	ENSCAPG00000014483	SYNJ1	76	67.477	Cavia_aperea
ENSDARG00000025011	synj1	98	71.275	ENSCPOG00000012182	SYNJ1	84	76.688	Cavia_porcellus
ENSDARG00000025011	synj1	100	70.412	ENSCCAG00000020825	SYNJ1	85	77.132	Cebus_capucinus
ENSDARG00000025011	synj1	100	70.980	ENSCATG00000033891	SYNJ1	86	77.322	Cercocebus_atys
ENSDARG00000025011	synj1	96	70.062	ENSCLAG00000009796	SYNJ1	100	81.935	Chinchilla_lanigera
ENSDARG00000025011	synj1	100	69.880	ENSCSAG00000009654	SYNJ1	83	77.687	Chlorocebus_sabaeus
ENSDARG00000025011	synj1	64	74.267	ENSCHOG00000012390	SYNJ1	54	74.267	Choloepus_hoffmanni
ENSDARG00000025011	synj1	92	71.233	ENSCPBG00000006402	SYNJ1	87	77.049	Chrysemys_picta_bellii
ENSDARG00000025011	synj1	100	70.990	ENSCANG00000031359	SYNJ1	84	77.687	Colobus_angolensis_palliatus
ENSDARG00000025011	synj1	100	70.173	ENSCGRG00001010861	Synj1	84	76.375	Cricetulus_griseus_chok1gshd
ENSDARG00000025011	synj1	100	68.394	ENSCGRG00000015749	Synj1	100	81.081	Cricetulus_griseus_crigri
ENSDARG00000025011	synj1	95	83.505	ENSCSEG00000019614	synj1	99	82.780	Cynoglossus_semilaevis
ENSDARG00000025011	synj1	100	79.298	ENSCVAG00000019250	synj1	100	81.200	Cyprinodon_variegatus
ENSDARG00000025011	synj1	96	67.300	ENSDNOG00000010732	SYNJ1	70	74.097	Dasypus_novemcinctus
ENSDARG00000025011	synj1	54	81.792	ENSDORG00000014735	-	100	81.792	Dipodomys_ordii
ENSDARG00000025011	synj1	82	77.936	ENSETEG00000018674	SYNJ1	59	77.936	Echinops_telfairi
ENSDARG00000025011	synj1	99	71.234	ENSEASG00005006287	SYNJ1	98	78.112	Equus_asinus_asinus
ENSDARG00000025011	synj1	99	71.754	ENSECAG00000004829	SYNJ1	100	70.624	Equus_caballus
ENSDARG00000025011	synj1	86	71.561	ENSEEUG00000005150	SYNJ1	62	71.561	Erinaceus_europaeus
ENSDARG00000025011	synj1	100	79.741	ENSELUG00000009731	synj1	81	84.040	Esox_lucius
ENSDARG00000025011	synj1	97	72.040	ENSFCAG00000012498	SYNJ1	84	77.464	Felis_catus
ENSDARG00000025011	synj1	72	60.000	ENSFALG00000004680	SYNJ1	60	71.486	Ficedula_albicollis
ENSDARG00000025011	synj1	100	68.073	ENSFDAG00000016818	SYNJ1	100	82.077	Fukomys_damarensis
ENSDARG00000025011	synj1	99	83.158	ENSFHEG00000017689	synj1	80	83.100	Fundulus_heteroclitus
ENSDARG00000025011	synj1	80	84.425	ENSGMOG00000014852	synj1	77	84.020	Gadus_morhua
ENSDARG00000025011	synj1	100	69.940	ENSGALG00000034317	SYNJ1	82	69.879	Gallus_gallus
ENSDARG00000025011	synj1	100	82.291	ENSGAFG00000019466	synj1	80	81.722	Gambusia_affinis
ENSDARG00000025011	synj1	99	77.390	ENSGACG00000020575	synj1	99	78.566	Gasterosteus_aculeatus
ENSDARG00000025011	synj1	100	69.963	ENSGAGG00000022523	SYNJ1	84	75.755	Gopherus_agassizii
ENSDARG00000025011	synj1	100	71.439	ENSGGOG00000015945	SYNJ1	86	77.413	Gorilla_gorilla
ENSDARG00000025011	synj1	100	80.977	ENSHBUG00000007774	synj1	100	82.169	Haplochromis_burtoni
ENSDARG00000025011	synj1	100	67.805	ENSHGLG00000006420	SYNJ1	100	81.650	Heterocephalus_glaber_female
ENSDARG00000025011	synj1	100	69.394	ENSHGLG00100012591	SYNJ1	100	81.650	Heterocephalus_glaber_male
ENSDARG00000025011	synj1	95	89.379	ENSHCOG00000012774	synj1	82	89.379	Hippocampus_comes
ENSDARG00000025011	synj1	99	88.906	ENSIPUG00000010691	SYNJ1	83	88.159	Ictalurus_punctatus
ENSDARG00000025011	synj1	96	69.771	ENSSTOG00000015806	SYNJ1	83	77.687	Ictidomys_tridecemlineatus
ENSDARG00000025011	synj1	98	63.346	ENSJJAG00000020168	Synj1	68	71.494	Jaculus_jaculus
ENSDARG00000025011	synj1	96	83.254	ENSKMAG00000004221	synj1	95	82.294	Kryptolebias_marmoratus
ENSDARG00000025011	synj1	100	80.319	ENSLBEG00000015081	synj1	99	78.358	Labrus_bergylta
ENSDARG00000025011	synj1	100	69.453	ENSLACG00000005928	SYNJ1	71	77.578	Latimeria_chalumnae
ENSDARG00000025011	synj1	95	76.012	ENSLOCG00000009230	synj1	74	84.706	Lepisosteus_oculatus
ENSDARG00000025011	synj1	97	68.524	ENSLAFG00000011806	SYNJ1	69	77.596	Loxodonta_africana
ENSDARG00000025011	synj1	98	69.625	ENSMFAG00000018883	SYNJ1	84	76.498	Macaca_fascicularis
ENSDARG00000025011	synj1	100	70.105	ENSMMUG00000004624	SYNJ1	83	77.778	Macaca_mulatta
ENSDARG00000025011	synj1	100	70.681	ENSMNEG00000040077	SYNJ1	79	77.596	Macaca_nemestrina
ENSDARG00000025011	synj1	100	70.712	ENSMLEG00000037029	SYNJ1	84	77.646	Mandrillus_leucophaeus
ENSDARG00000025011	synj1	100	83.647	ENSMAMG00000013404	synj1	80	83.120	Mastacembelus_armatus
ENSDARG00000025011	synj1	100	82.932	ENSMZEG00005024358	synj1	100	82.971	Maylandia_zebra
ENSDARG00000025011	synj1	100	67.481	ENSMGAG00000014522	SYNJ1	69	75.827	Meleagris_gallopavo
ENSDARG00000025011	synj1	100	68.741	ENSMAUG00000009743	Synj1	100	81.650	Mesocricetus_auratus
ENSDARG00000025011	synj1	100	71.096	ENSMICG00000034953	SYNJ1	86	77.132	Microcebus_murinus
ENSDARG00000025011	synj1	99	78.582	ENSMMOG00000010203	synj1	98	79.878	Mola_mola
ENSDARG00000025011	synj1	96	63.588	ENSMODG00000021073	SYNJ1	81	72.948	Monodelphis_domestica
ENSDARG00000025011	synj1	100	81.839	ENSMALG00000014015	synj1	80	81.628	Monopterus_albus
ENSDARG00000025011	synj1	100	68.741	MGP_CAROLIEiJ_G0020951	Synj1	100	81.935	Mus_caroli
ENSDARG00000025011	synj1	96	70.430	ENSMUSG00000022973	Synj1	100	81.935	Mus_musculus
ENSDARG00000025011	synj1	96	70.353	MGP_PahariEiJ_G0016656	Synj1	100	81.935	Mus_pahari
ENSDARG00000025011	synj1	96	70.430	MGP_SPRETEiJ_G0021857	Synj1	100	82.077	Mus_spretus
ENSDARG00000025011	synj1	96	68.148	ENSMPUG00000001153	SYNJ1	70	77.203	Mustela_putorius_furo
ENSDARG00000025011	synj1	52	79.853	ENSMLUG00000026584	-	100	79.853	Myotis_lucifugus
ENSDARG00000025011	synj1	100	71.011	ENSNGAG00000000453	Synj1	100	81.792	Nannospalax_galili
ENSDARG00000025011	synj1	100	78.712	ENSNBRG00000011936	synj1	99	73.199	Neolamprologus_brichardi
ENSDARG00000025011	synj1	86	66.792	ENSNLEG00000003734	SYNJ1	84	75.879	Nomascus_leucogenys
ENSDARG00000025011	synj1	86	59.119	ENSMEUG00000004158	-	65	64.884	Notamacropus_eugenii
ENSDARG00000025011	synj1	92	78.667	ENSOPRG00000013602	SYNJ1	63	78.667	Ochotona_princeps
ENSDARG00000025011	synj1	54	81.935	ENSODEG00000002409	-	100	81.935	Octodon_degus
ENSDARG00000025011	synj1	99	77.485	ENSONIG00000004667	synj1	78	87.862	Oreochromis_niloticus
ENSDARG00000025011	synj1	93	66.978	ENSOANG00000006929	SYNJ1	69	76.101	Ornithorhynchus_anatinus
ENSDARG00000025011	synj1	98	67.189	ENSOCUG00000001420	SYNJ1	70	75.453	Oryctolagus_cuniculus
ENSDARG00000025011	synj1	100	81.763	ENSORLG00000004320	synj1	100	80.415	Oryzias_latipes
ENSDARG00000025011	synj1	99	79.590	ENSORLG00020011994	synj1	98	79.305	Oryzias_latipes_hni
ENSDARG00000025011	synj1	100	81.085	ENSORLG00015018077	synj1	78	81.217	Oryzias_latipes_hsok
ENSDARG00000025011	synj1	100	81.118	ENSOMEG00000014322	synj1	99	80.104	Oryzias_melastigma
ENSDARG00000025011	synj1	99	66.074	ENSOGAG00000006010	SYNJ1	68	74.071	Otolemur_garnettii
ENSDARG00000025011	synj1	97	71.133	ENSOARG00000013414	SYNJ1	68	77.314	Ovis_aries
ENSDARG00000025011	synj1	99	71.386	ENSPPAG00000026784	SYNJ1	84	77.778	Pan_paniscus
ENSDARG00000025011	synj1	97	71.963	ENSPPRG00000023469	SYNJ1	84	77.372	Panthera_pardus
ENSDARG00000025011	synj1	97	72.040	ENSPTIG00000007930	SYNJ1	84	77.464	Panthera_tigris_altaica
ENSDARG00000025011	synj1	100	71.514	ENSPTRG00000048135	-	86	77.413	Pan_troglodytes
ENSDARG00000025011	synj1	100	71.514	ENSPTRG00000023787	SYNJ1	86	77.413	Pan_troglodytes
ENSDARG00000025011	synj1	100	70.755	ENSPANG00000022531	SYNJ1	84	77.687	Papio_anubis
ENSDARG00000025011	synj1	84	86.751	ENSPKIG00000022603	synj1	89	86.751	Paramormyrops_kingsleyae
ENSDARG00000025011	synj1	99	80.105	ENSPMGG00000016831	synj1	93	80.329	Periophthalmus_magnuspinnatus
ENSDARG00000025011	synj1	100	68.889	ENSPEMG00000018767	Synj1	100	82.077	Peromyscus_maniculatus_bairdii
ENSDARG00000025011	synj1	78	59.904	ENSPMAG00000002887	synj1	80	59.294	Petromyzon_marinus
ENSDARG00000025011	synj1	96	70.593	ENSPCIG00000016372	SYNJ1	83	75.273	Phascolarctos_cinereus
ENSDARG00000025011	synj1	99	83.598	ENSPFOG00000016886	synj1	100	83.145	Poecilia_formosa
ENSDARG00000025011	synj1	100	82.116	ENSPLAG00000017559	synj1	100	80.000	Poecilia_latipinna
ENSDARG00000025011	synj1	100	82.116	ENSPMEG00000007643	synj1	81	81.581	Poecilia_mexicana
ENSDARG00000025011	synj1	100	83.396	ENSPREG00000012412	synj1	100	81.879	Poecilia_reticulata
ENSDARG00000025011	synj1	99	67.518	ENSPPYG00000011365	SYNJ1	78	77.505	Pongo_abelii
ENSDARG00000025011	synj1	80	82.857	ENSPCAG00000009906	SYNJ1	58	82.857	Procavia_capensis
ENSDARG00000025011	synj1	92	75.369	ENSPCOG00000024841	SYNJ1	95	75.682	Propithecus_coquereli
ENSDARG00000025011	synj1	83	73.182	ENSPVAG00000000892	SYNJ1	69	73.157	Pteropus_vampyrus
ENSDARG00000025011	synj1	100	81.839	ENSPNYG00000022989	synj1	100	82.380	Pundamilia_nyererei
ENSDARG00000025011	synj1	84	92.153	ENSPNAG00000021119	synj1	91	92.153	Pygocentrus_nattereri
ENSDARG00000025011	synj1	100	70.774	ENSRNOG00000002051	Synj1	85	77.525	Rattus_norvegicus
ENSDARG00000025011	synj1	100	70.990	ENSRBIG00000034477	SYNJ1	84	77.596	Rhinopithecus_bieti
ENSDARG00000025011	synj1	100	69.880	ENSRROG00000039256	SYNJ1	84	77.687	Rhinopithecus_roxellana
ENSDARG00000025011	synj1	100	69.663	ENSSBOG00000021001	SYNJ1	85	77.223	Saimiri_boliviensis_boliviensis
ENSDARG00000025011	synj1	95	68.231	ENSSHAG00000008538	SYNJ1	70	75.362	Sarcophilus_harrisii
ENSDARG00000025011	synj1	100	85.152	ENSSFOG00015006095	synj1	84	82.674	Scleropages_formosus
ENSDARG00000025011	synj1	99	81.487	ENSSMAG00000018066	synj1	98	81.055	Scophthalmus_maximus
ENSDARG00000025011	synj1	100	78.102	ENSSDUG00000013058	synj1	80	83.183	Seriola_dumerili
ENSDARG00000025011	synj1	100	83.696	ENSSLDG00000021406	synj1	100	83.446	Seriola_lalandi_dorsalis
ENSDARG00000025011	synj1	94	72.262	ENSSPUG00000012552	SYNJ1	71	76.460	Sphenodon_punctatus
ENSDARG00000025011	synj1	100	83.485	ENSSPAG00000017029	synj1	99	81.912	Stegastes_partitus
ENSDARG00000025011	synj1	94	83.466	ENSSPAG00000006812	SYNJ1	79	82.764	Stegastes_partitus
ENSDARG00000025011	synj1	100	68.635	ENSSSCG00000012035	SYNJ1	85	76.812	Sus_scrofa
ENSDARG00000025011	synj1	100	66.497	ENSTGUG00000013445	SYNJ1	70	76.130	Taeniopygia_guttata
ENSDARG00000025011	synj1	100	80.382	ENSTRUG00000006907	synj1	97	79.284	Takifugu_rubripes
ENSDARG00000025011	synj1	100	73.091	ENSTNIG00000009940	synj1	83	82.616	Tetraodon_nigroviridis
ENSDARG00000025011	synj1	73	82.595	ENSTBEG00000016298	SYNJ1	61	82.595	Tupaia_belangeri
ENSDARG00000025011	synj1	99	62.555	ENSTTRG00000002222	SYNJ1	71	70.502	Tursiops_truncatus
ENSDARG00000025011	synj1	95	73.171	ENSUAMG00000018606	SYNJ1	99	79.772	Ursus_americanus
ENSDARG00000025011	synj1	93	77.646	ENSUMAG00000018419	SYNJ1	99	79.772	Ursus_maritimus
ENSDARG00000025011	synj1	87	82.857	ENSVPAG00000001241	SYNJ1	59	82.857	Vicugna_pacos
ENSDARG00000025011	synj1	100	68.149	ENSVVUG00000023125	SYNJ1	83	77.555	Vulpes_vulpes
ENSDARG00000025011	synj1	95	68.095	ENSXETG00000009899	synj1	69	75.634	Xenopus_tropicalis
ENSDARG00000025011	synj1	99	83.142	ENSXCOG00000011896	synj1	99	82.407	Xiphophorus_couchianus
ENSDARG00000025011	synj1	99	82.803	ENSXMAG00000017524	synj1	100	81.859	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	21873635.	IBA	Function
GO:0007268	chemical synaptic transmission	19424431.	IMP	Process
GO:0009584	detection of visible light	11222552.	IMP	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0017124	SH3 domain binding	21873635.	IBA	Function
GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	15470129.	IDA	Function
GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	-	IEA	Function
GO:0034596	phosphatidylinositol phosphate 4-phosphatase activity	15470129.	IDA	Function
GO:0042578	phosphoric ester hydrolase activity	-	IEA	Function
GO:0046549	retinal cone cell development	15470129.19827152.	IMP	Process
GO:0046855	inositol phosphate dephosphorylation	21873635.	IBA	Process
GO:0046856	phosphatidylinositol dephosphorylation	21873635.	IBA	Process
GO:0046856	phosphatidylinositol dephosphorylation	-	IEA	Process
GO:0048488	synaptic vesicle endocytosis	-	IEA	Process
GO:0050808	synapse organization	15470129.24419318.	IMP	Process
GO:0060041	retina development in camera-type eye	9667001.11264308.	IMP	Process
GO:0099518	vesicle cytoskeletal trafficking	27417116.	IMP	Process