EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000025212 (Gene tree)
Gene ID: 553648
Gene Symbol: ints11
Alias: cpsf3l|ints11|zgc:110671
Full Name: integrator complex subunit 11
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 28366 bases
Position: chr23:37057603-37085968
Accession: ZDB-GENE-050522-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000119202	Beta-Casp	PF10996.8	1.1e-25	1	1
ENSDARP00000032843	Beta-Casp	PF10996.8	1.2e-25	1	1
ENSDARP00000120783	Lactamase_B	PF00753.27	2.5e-12	1	1
ENSDARP00000119202	Lactamase_B	PF00753.27	2.9e-11	1	1
ENSDARP00000032843	Lactamase_B	PF00753.27	3.7e-11	1	1
ENSDARP00000119202	RMMBL	PF07521.12	1.2e-18	1	1
ENSDARP00000032843	RMMBL	PF07521.12	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000139662	-	1740	-	ENSDARP00000119202	545 (aa)	-	E9QFP8
ENSDART00000031016	-	7259	XM_005166209	ENSDARP00000032843	598 (aa)	XP_005166266	F1QEY5
ENSDART00000144333	-	937	-	ENSDARP00000120783	222 (aa)	-	E9QIT1

Gene Model

Click here to download ENSDARG00000025212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000025212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000025212	ints11	97	42.130	ENSDARG00000027649	cpsf3	70	38.431

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000025212	ints11	100	92.342	ENSG00000127054	INTS11	100	93.578	Homo_sapiens
ENSDARG00000025212	ints11	100	97.748	ENSAPOG00000022656	ints11	99	94.314	Acanthochromis_polyacanthus
ENSDARG00000025212	ints11	100	91.441	ENSAMEG00000013755	INTS11	99	84.757	Ailuropoda_melanoleuca
ENSDARG00000025212	ints11	100	97.297	ENSACIG00000016715	ints11	99	94.649	Amphilophus_citrinellus
ENSDARG00000025212	ints11	100	97.748	ENSAOCG00000021172	ints11	99	94.649	Amphiprion_ocellaris
ENSDARG00000025212	ints11	100	97.748	ENSAPEG00000024732	ints11	99	94.649	Amphiprion_percula
ENSDARG00000025212	ints11	100	96.847	ENSATEG00000024376	ints11	99	93.645	Anabas_testudineus
ENSDARG00000025212	ints11	100	92.000	ENSAPLG00000005238	INTS11	99	86.500	Anas_platyrhynchos
ENSDARG00000025212	ints11	100	94.144	ENSACAG00000013975	INTS11	99	85.260	Anolis_carolinensis
ENSDARG00000025212	ints11	100	92.342	ENSANAG00000034133	INTS11	99	90.476	Aotus_nancymaae
ENSDARG00000025212	ints11	100	97.297	ENSACLG00000018782	ints11	99	94.200	Astatotilapia_calliptera
ENSDARG00000025212	ints11	100	99.099	ENSAMXG00000038758	ints11	99	95.318	Astyanax_mexicanus
ENSDARG00000025212	ints11	100	90.541	ENSBTAG00000007620	INTS11	99	83.920	Bos_taurus
ENSDARG00000025212	ints11	100	75.785	WBGene00008642	F10B5.8	77	68.376	Caenorhabditis_elegans
ENSDARG00000025212	ints11	100	92.342	ENSCJAG00000011144	INTS11	99	90.476	Callithrix_jacchus
ENSDARG00000025212	ints11	100	91.892	ENSCAFG00000019287	INTS11	99	84.757	Canis_familiaris
ENSDARG00000025212	ints11	100	91.892	ENSCAFG00020011566	INTS11	99	84.757	Canis_lupus_dingo
ENSDARG00000025212	ints11	100	90.541	ENSCHIG00000023117	INTS11	99	83.920	Capra_hircus
ENSDARG00000025212	ints11	100	88.739	ENSTSYG00000012018	INTS11	98	91.781	Carlito_syrichta
ENSDARG00000025212	ints11	99	77.376	ENSCAPG00000012788	INTS11	91	82.520	Cavia_aperea
ENSDARG00000025212	ints11	100	92.342	ENSCPOG00000005152	INTS11	99	84.757	Cavia_porcellus
ENSDARG00000025212	ints11	100	92.342	ENSCCAG00000026348	INTS11	99	90.476	Cebus_capucinus
ENSDARG00000025212	ints11	100	92.342	ENSCATG00000005882	INTS11	99	90.476	Cercocebus_atys
ENSDARG00000025212	ints11	100	92.342	ENSCLAG00000004586	INTS11	99	84.422	Chinchilla_lanigera
ENSDARG00000025212	ints11	100	92.342	ENSCSAG00000000681	INTS11	99	84.590	Chlorocebus_sabaeus
ENSDARG00000025212	ints11	100	94.144	ENSCPBG00000022634	INTS11	99	94.262	Chrysemys_picta_bellii
ENSDARG00000025212	ints11	100	84.753	ENSCING00000002398	-	99	68.771	Ciona_intestinalis
ENSDARG00000025212	ints11	100	84.305	ENSCSAVG00000007312	-	99	69.231	Ciona_savignyi
ENSDARG00000025212	ints11	100	92.342	ENSCANG00000034418	INTS11	99	90.476	Colobus_angolensis_palliatus
ENSDARG00000025212	ints11	100	91.441	ENSCGRG00001013448	Ints11	99	84.087	Cricetulus_griseus_chok1gshd
ENSDARG00000025212	ints11	100	91.441	ENSCGRG00000006961	Ints11	99	84.087	Cricetulus_griseus_crigri
ENSDARG00000025212	ints11	100	98.198	ENSCSEG00000017374	ints11	99	93.980	Cynoglossus_semilaevis
ENSDARG00000025212	ints11	100	97.748	ENSCVAG00000008788	ints11	100	88.796	Cyprinodon_variegatus
ENSDARG00000025212	ints11	100	91.892	ENSDNOG00000025863	INTS11	84	92.343	Dasypus_novemcinctus
ENSDARG00000025212	ints11	95	92.453	ENSDORG00000002045	Ints11	99	84.327	Dipodomys_ordii
ENSDARG00000025212	ints11	100	83.784	FBgn0039691	IntS11	99	69.697	Drosophila_melanogaster
ENSDARG00000025212	ints11	92	81.600	ENSETEG00000002094	INTS11	100	81.600	Echinops_telfairi
ENSDARG00000025212	ints11	100	93.694	ENSEBUG00000003190	-	100	82.747	Eptatretus_burgeri
ENSDARG00000025212	ints11	100	91.892	ENSEASG00005014989	INTS11	77	83.039	Equus_asinus_asinus
ENSDARG00000025212	ints11	100	92.342	ENSECAG00000023292	INTS11	70	84.925	Equus_caballus
ENSDARG00000025212	ints11	100	91.441	ENSEEUG00000000838	INTS11	99	84.590	Erinaceus_europaeus
ENSDARG00000025212	ints11	100	98.198	ENSELUG00000004815	ints11	99	94.147	Esox_lucius
ENSDARG00000025212	ints11	100	92.342	ENSFCAG00000007618	INTS11	99	92.857	Felis_catus
ENSDARG00000025212	ints11	100	87.838	ENSFALG00000009231	INTS11	99	84.757	Ficedula_albicollis
ENSDARG00000025212	ints11	100	92.793	ENSFDAG00000009131	INTS11	99	84.925	Fukomys_damarensis
ENSDARG00000025212	ints11	100	97.297	ENSFHEG00000007863	ints11	100	93.144	Fundulus_heteroclitus
ENSDARG00000025212	ints11	100	98.649	ENSGMOG00000006721	ints11	99	92.821	Gadus_morhua
ENSDARG00000025212	ints11	100	93.243	ENSGALG00000001691	INTS11	99	86.935	Gallus_gallus
ENSDARG00000025212	ints11	100	86.184	ENSGAFG00000019948	ints11	100	86.184	Gambusia_affinis
ENSDARG00000025212	ints11	100	97.748	ENSGACG00000011260	ints11	99	93.980	Gasterosteus_aculeatus
ENSDARG00000025212	ints11	100	94.595	ENSGAGG00000015874	INTS11	99	86.265	Gopherus_agassizii
ENSDARG00000025212	ints11	100	92.342	ENSGGOG00000005366	INTS11	99	90.476	Gorilla_gorilla
ENSDARG00000025212	ints11	100	97.748	ENSHBUG00000006820	ints11	99	94.482	Haplochromis_burtoni
ENSDARG00000025212	ints11	97	92.558	ENSHGLG00000017561	INTS11	98	84.237	Heterocephalus_glaber_female
ENSDARG00000025212	ints11	97	92.558	ENSHGLG00100014276	INTS11	98	84.237	Heterocephalus_glaber_male
ENSDARG00000025212	ints11	100	96.847	ENSHCOG00000013135	ints11	99	94.314	Hippocampus_comes
ENSDARG00000025212	ints11	100	96.396	ENSIPUG00000022761	cpsf3l	99	94.314	Ictalurus_punctatus
ENSDARG00000025212	ints11	96	92.991	ENSSTOG00000020019	INTS11	98	85.059	Ictidomys_tridecemlineatus
ENSDARG00000025212	ints11	100	89.189	ENSJJAG00000008717	Ints11	99	80.235	Jaculus_jaculus
ENSDARG00000025212	ints11	100	96.847	ENSKMAG00000003315	ints11	99	93.300	Kryptolebias_marmoratus
ENSDARG00000025212	ints11	100	98.198	ENSLBEG00000011392	ints11	99	92.687	Labrus_bergylta
ENSDARG00000025212	ints11	100	80.180	ENSLACG00000018802	INTS11	99	73.256	Latimeria_chalumnae
ENSDARG00000025212	ints11	100	97.297	ENSLOCG00000002177	ints11	99	85.117	Lepisosteus_oculatus
ENSDARG00000025212	ints11	99	89.593	ENSLAFG00000013687	INTS11	99	83.893	Loxodonta_africana
ENSDARG00000025212	ints11	100	92.342	ENSMFAG00000044583	INTS11	99	90.441	Macaca_fascicularis
ENSDARG00000025212	ints11	99	90.090	ENSMMUG00000013866	INTS11	98	90.000	Macaca_mulatta
ENSDARG00000025212	ints11	100	92.342	ENSMNEG00000030021	INTS11	99	90.476	Macaca_nemestrina
ENSDARG00000025212	ints11	96	90.972	ENSMLEG00000044372	INTS11	99	90.972	Mandrillus_leucophaeus
ENSDARG00000025212	ints11	100	97.748	ENSMAMG00000004522	ints11	99	93.813	Mastacembelus_armatus
ENSDARG00000025212	ints11	100	97.297	ENSMZEG00005023352	ints11	99	94.314	Maylandia_zebra
ENSDARG00000025212	ints11	100	93.243	ENSMGAG00000002879	INTS11	99	86.957	Meleagris_gallopavo
ENSDARG00000025212	ints11	100	91.441	ENSMAUG00000010199	Ints11	99	84.087	Mesocricetus_auratus
ENSDARG00000025212	ints11	100	91.441	ENSMICG00000014186	INTS11	99	91.304	Microcebus_murinus
ENSDARG00000025212	ints11	100	91.441	ENSMOCG00000021304	Ints11	99	84.255	Microtus_ochrogaster
ENSDARG00000025212	ints11	100	94.144	ENSMMOG00000015040	ints11	99	85.092	Mola_mola
ENSDARG00000025212	ints11	100	93.243	ENSMODG00000006290	INTS11	99	86.265	Monodelphis_domestica
ENSDARG00000025212	ints11	100	97.748	ENSMALG00000002210	ints11	99	93.645	Monopterus_albus
ENSDARG00000025212	ints11	100	91.441	MGP_CAROLIEiJ_G0026910	Ints11	99	84.255	Mus_caroli
ENSDARG00000025212	ints11	100	91.441	ENSMUSG00000029034	Ints11	99	84.255	Mus_musculus
ENSDARG00000025212	ints11	100	91.441	MGP_PahariEiJ_G0029259	Ints11	99	84.255	Mus_pahari
ENSDARG00000025212	ints11	100	91.441	MGP_SPRETEiJ_G0027905	Ints11	99	84.255	Mus_spretus
ENSDARG00000025212	ints11	93	87.377	ENSMPUG00000014311	INTS11	99	84.683	Mustela_putorius_furo
ENSDARG00000025212	ints11	100	91.441	ENSNGAG00000010139	Ints11	99	84.255	Nannospalax_galili
ENSDARG00000025212	ints11	100	97.748	ENSNBRG00000002564	ints11	99	87.625	Neolamprologus_brichardi
ENSDARG00000025212	ints11	100	92.342	ENSNLEG00000000053	INTS11	99	90.476	Nomascus_leucogenys
ENSDARG00000025212	ints11	95	93.396	ENSMEUG00000011664	INTS11	99	81.818	Notamacropus_eugenii
ENSDARG00000025212	ints11	60	94.891	ENSOPRG00000001794	-	83	94.891	Ochotona_princeps
ENSDARG00000025212	ints11	100	92.342	ENSODEG00000009761	INTS11	99	84.422	Octodon_degus
ENSDARG00000025212	ints11	100	97.748	ENSONIG00000016600	ints11	99	94.314	Oreochromis_niloticus
ENSDARG00000025212	ints11	100	57.965	ENSOANG00000013023	-	99	58.871	Ornithorhynchus_anatinus
ENSDARG00000025212	ints11	100	97.748	ENSORLG00000015957	ints11	99	92.630	Oryzias_latipes
ENSDARG00000025212	ints11	100	97.748	ENSORLG00020008544	ints11	99	92.630	Oryzias_latipes_hni
ENSDARG00000025212	ints11	100	97.748	ENSORLG00015003381	ints11	99	92.630	Oryzias_latipes_hsok
ENSDARG00000025212	ints11	100	97.748	ENSOMEG00000018159	ints11	100	92.256	Oryzias_melastigma
ENSDARG00000025212	ints11	100	91.031	ENSOGAG00000000463	INTS11	99	83.946	Otolemur_garnettii
ENSDARG00000025212	ints11	96	91.080	ENSOARG00000004725	INTS11	97	90.172	Ovis_aries
ENSDARG00000025212	ints11	100	92.342	ENSPPAG00000037865	INTS11	99	90.476	Pan_paniscus
ENSDARG00000025212	ints11	100	92.342	ENSPPRG00000021402	INTS11	99	92.857	Panthera_pardus
ENSDARG00000025212	ints11	96	92.958	ENSPTIG00000019834	INTS11	95	91.339	Panthera_tigris_altaica
ENSDARG00000025212	ints11	100	92.342	ENSPTRG00000051102	INTS11	99	90.476	Pan_troglodytes
ENSDARG00000025212	ints11	100	92.342	ENSPANG00000019349	INTS11	99	90.476	Papio_anubis
ENSDARG00000025212	ints11	100	98.198	ENSPKIG00000008091	ints11	99	94.649	Paramormyrops_kingsleyae
ENSDARG00000025212	ints11	100	94.144	ENSPSIG00000002824	INTS11	99	85.930	Pelodiscus_sinensis
ENSDARG00000025212	ints11	100	98.198	ENSPMGG00000006430	ints11	96	93.793	Periophthalmus_magnuspinnatus
ENSDARG00000025212	ints11	100	91.441	ENSPEMG00000018526	Ints11	99	84.255	Peromyscus_maniculatus_bairdii
ENSDARG00000025212	ints11	79	92.614	ENSPMAG00000005816	-	100	92.614	Petromyzon_marinus
ENSDARG00000025212	ints11	66	75.000	ENSPCIG00000023187	-	99	75.000	Phascolarctos_cinereus
ENSDARG00000025212	ints11	100	94.144	ENSPCIG00000007815	-	99	86.432	Phascolarctos_cinereus
ENSDARG00000025212	ints11	100	97.748	ENSPFOG00000008512	ints11	100	93.489	Poecilia_formosa
ENSDARG00000025212	ints11	100	97.748	ENSPLAG00000019195	ints11	100	93.478	Poecilia_latipinna
ENSDARG00000025212	ints11	100	97.748	ENSPMEG00000018956	ints11	100	93.478	Poecilia_mexicana
ENSDARG00000025212	ints11	100	97.748	ENSPREG00000021516	ints11	100	93.311	Poecilia_reticulata
ENSDARG00000025212	ints11	96	92.523	ENSPPYG00000002013	INTS11	99	80.239	Pongo_abelii
ENSDARG00000025212	ints11	81	92.778	ENSPCAG00000002309	INTS11	68	92.778	Procavia_capensis
ENSDARG00000025212	ints11	100	91.441	ENSPCOG00000016861	INTS11	99	90.625	Propithecus_coquereli
ENSDARG00000025212	ints11	100	90.541	ENSPVAG00000001017	INTS11	99	84.590	Pteropus_vampyrus
ENSDARG00000025212	ints11	100	97.748	ENSPNYG00000021238	ints11	99	94.482	Pundamilia_nyererei
ENSDARG00000025212	ints11	100	98.198	ENSPNAG00000022204	ints11	99	95.652	Pygocentrus_nattereri
ENSDARG00000025212	ints11	93	31.019	ENSPNAG00000016476	-	84	31.679	Pygocentrus_nattereri
ENSDARG00000025212	ints11	100	91.441	ENSRNOG00000019712	Ints11	99	84.255	Rattus_norvegicus
ENSDARG00000025212	ints11	100	91.892	ENSRBIG00000039487	INTS11	99	90.476	Rhinopithecus_bieti
ENSDARG00000025212	ints11	57	76.401	ENSRROG00000039631	INTS11	99	76.401	Rhinopithecus_roxellana
ENSDARG00000025212	ints11	65	90.278	ENSRROG00000033601	-	51	90.278	Rhinopithecus_roxellana
ENSDARG00000025212	ints11	100	92.342	ENSSBOG00000018848	INTS11	99	90.476	Saimiri_boliviensis_boliviensis
ENSDARG00000025212	ints11	100	99.099	ENSSFOG00015020610	cpsf3l	99	94.482	Scleropages_formosus
ENSDARG00000025212	ints11	100	98.649	ENSSMAG00000019579	ints11	99	93.980	Scophthalmus_maximus
ENSDARG00000025212	ints11	100	97.748	ENSSDUG00000003980	ints11	99	94.147	Seriola_dumerili
ENSDARG00000025212	ints11	100	97.748	ENSSLDG00000017198	ints11	99	94.314	Seriola_lalandi_dorsalis
ENSDARG00000025212	ints11	100	94.144	ENSSPUG00000016767	INTS11	100	88.095	Sphenodon_punctatus
ENSDARG00000025212	ints11	100	97.748	ENSSPAG00000018290	ints11	99	94.314	Stegastes_partitus
ENSDARG00000025212	ints11	100	90.541	ENSSSCG00000003339	INTS11	99	83.920	Sus_scrofa
ENSDARG00000025212	ints11	95	92.925	ENSTGUG00000003192	-	99	86.371	Taeniopygia_guttata
ENSDARG00000025212	ints11	100	97.748	ENSTRUG00000005523	ints11	99	93.144	Takifugu_rubripes
ENSDARG00000025212	ints11	100	98.198	ENSTNIG00000012415	ints11	99	93.144	Tetraodon_nigroviridis
ENSDARG00000025212	ints11	86	87.420	ENSTBEG00000005377	INTS11	99	84.151	Tupaia_belangeri
ENSDARG00000025212	ints11	100	77.027	ENSTTRG00000017031	INTS11	99	71.692	Tursiops_truncatus
ENSDARG00000025212	ints11	100	91.892	ENSUAMG00000012804	INTS11	99	84.925	Ursus_americanus
ENSDARG00000025212	ints11	96	92.488	ENSUMAG00000002070	INTS11	97	85.034	Ursus_maritimus
ENSDARG00000025212	ints11	65	79.915	ENSVPAG00000005134	-	76	79.915	Vicugna_pacos
ENSDARG00000025212	ints11	100	91.892	ENSVVUG00000004350	INTS11	99	85.092	Vulpes_vulpes
ENSDARG00000025212	ints11	100	96.396	ENSXETG00000030716	INTS11	99	87.605	Xenopus_tropicalis
ENSDARG00000025212	ints11	100	87.458	ENSXCOG00000015382	ints11	100	87.458	Xiphophorus_couchianus
ENSDARG00000025212	ints11	100	97.748	ENSXMAG00000012456	ints11	100	93.645	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0016180	snRNA processing	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0043484	regulation of RNA splicing	19605500.	IMP	Process