EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000025699 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 16128 bases
Position: chr11:25560072-25576199
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000031774	MBD	PF01429.19	1.5e-13	1	1
ENSDARP00000109727	MBD	PF01429.19	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000147179	-	393	-	ENSDARP00000115553	65 (aa)	-	E9QG31
ENSDART00000124131	-	3702	-	ENSDARP00000109727	961 (aa)	-	F1QDB7
ENSDART00000033914	-	3579	-	ENSDARP00000031774	962 (aa)	-	F1R9V0

Gene Model

Click here to download ENSDARG00000025699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000025699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000025699	mbd1b	88	34.432	ENSAPOG00000012810	mbd1b	93	34.988	Acanthochromis_polyacanthus
ENSDARG00000025699	mbd1b	72	40.396	ENSACIG00000010590	mbd1b	91	35.280	Amphilophus_citrinellus
ENSDARG00000025699	mbd1b	88	36.446	ENSAOCG00000020272	mbd1b	94	36.485	Amphiprion_ocellaris
ENSDARG00000025699	mbd1b	88	36.333	ENSAPEG00000023230	mbd1b	94	36.650	Amphiprion_percula
ENSDARG00000025699	mbd1b	85	36.237	ENSATEG00000009608	mbd1b	92	36.829	Anabas_testudineus
ENSDARG00000025699	mbd1b	90	35.216	ENSACLG00000021383	mbd1b	91	37.178	Astatotilapia_calliptera
ENSDARG00000025699	mbd1b	81	34.132	ENSCSEG00000009082	mbd1b	94	33.850	Cynoglossus_semilaevis
ENSDARG00000025699	mbd1b	82	37.212	ENSCVAG00000001167	mbd1b	92	37.095	Cyprinodon_variegatus
ENSDARG00000025699	mbd1b	81	38.941	ENSELUG00000004375	mbd1b	90	39.372	Esox_lucius
ENSDARG00000025699	mbd1b	80	37.019	ENSFHEG00000020120	mbd1b	90	37.376	Fundulus_heteroclitus
ENSDARG00000025699	mbd1b	80	37.484	ENSGAFG00000008975	mbd1b	92	36.855	Gambusia_affinis
ENSDARG00000025699	mbd1b	58	59.211	ENSGACG00000012106	-	93	62.121	Gasterosteus_aculeatus
ENSDARG00000025699	mbd1b	90	35.216	ENSHBUG00000014270	mbd1b	91	37.132	Haplochromis_burtoni
ENSDARG00000025699	mbd1b	83	33.134	ENSHCOG00000009952	mbd1b	92	33.871	Hippocampus_comes
ENSDARG00000025699	mbd1b	81	39.225	ENSIPUG00000015243	-	96	39.927	Ictalurus_punctatus
ENSDARG00000025699	mbd1b	89	35.241	ENSKMAG00000020760	mbd1b	92	35.956	Kryptolebias_marmoratus
ENSDARG00000025699	mbd1b	62	38.125	ENSLACG00000002414	-	87	38.125	Latimeria_chalumnae
ENSDARG00000025699	mbd1b	58	35.533	ENSMAMG00000023341	-	76	36.862	Mastacembelus_armatus
ENSDARG00000025699	mbd1b	90	35.216	ENSMZEG00005010421	mbd1b	91	37.178	Maylandia_zebra
ENSDARG00000025699	mbd1b	77	57.000	ENSMMOG00000011607	mbd1b	93	57.000	Mola_mola
ENSDARG00000025699	mbd1b	85	36.977	ENSMALG00000007808	mbd1b	91	37.970	Monopterus_albus
ENSDARG00000025699	mbd1b	91	34.820	ENSONIG00000020289	mbd1b	99	38.499	Oreochromis_niloticus
ENSDARG00000025699	mbd1b	80	35.424	ENSORLG00000029390	mbd1b	92	35.897	Oryzias_latipes
ENSDARG00000025699	mbd1b	88	34.386	ENSORLG00020000575	mbd1b	92	36.175	Oryzias_latipes_hni
ENSDARG00000025699	mbd1b	90	34.219	ENSORLG00015014812	mbd1b	92	35.976	Oryzias_latipes_hsok
ENSDARG00000025699	mbd1b	82	35.115	ENSOMEG00000023660	mbd1b	91	35.577	Oryzias_melastigma
ENSDARG00000025699	mbd1b	83	39.686	ENSPFOG00000007511	mbd1b	99	40.928	Poecilia_formosa
ENSDARG00000025699	mbd1b	80	36.981	ENSPLAG00000021258	mbd1b	91	36.797	Poecilia_latipinna
ENSDARG00000025699	mbd1b	88	36.092	ENSPMEG00000024145	mbd1b	91	36.978	Poecilia_mexicana
ENSDARG00000025699	mbd1b	80	36.579	ENSPREG00000021805	mbd1b	91	36.220	Poecilia_reticulata
ENSDARG00000025699	mbd1b	83	41.974	ENSPNAG00000018075	mbd1b	95	42.449	Pygocentrus_nattereri
ENSDARG00000025699	mbd1b	73	56.098	ENSSFOG00015008591	-	87	56.098	Scleropages_formosus
ENSDARG00000025699	mbd1b	80	36.442	ENSSMAG00000014640	mbd1b	82	36.196	Scophthalmus_maximus
ENSDARG00000025699	mbd1b	80	36.745	ENSSDUG00000012996	mbd1b	92	37.813	Seriola_dumerili
ENSDARG00000025699	mbd1b	60	54.140	ENSSLDG00000012422	mbd1b	86	54.140	Seriola_lalandi_dorsalis
ENSDARG00000025699	mbd1b	70	52.830	ENSSPAG00000021447	mbd1b	91	49.432	Stegastes_partitus
ENSDARG00000025699	mbd1b	89	35.281	ENSTRUG00000013422	mbd1b	93	36.165	Takifugu_rubripes
ENSDARG00000025699	mbd1b	69	37.783	ENSTNIG00000007326	-	92	37.783	Tetraodon_nigroviridis
ENSDARG00000025699	mbd1b	89	36.405	ENSXMAG00000005628	mbd1b	92	36.823	Xiphophorus_maculatus