EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000026842 (Gene tree)
Gene ID: 327495
Gene Symbol: acin1b
Alias: acinus|acinusb|fi14c05|wu:fe06a10|wu:fi14c05
Full Name: apoptotic chromatin condensation inducer 1b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 27650 bases
Position: chr7:24069421-24097070
Accession: ZDB-GENE-030826-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000029637	SAP	PF02037.27	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000173902	-	889	-	-	- (aa)	-	-
ENSDART00000034218	-	5231	XM_021477409	ENSDARP00000029637	1259 (aa)	XP_021333084	F1Q511
ENSDART00000141749	-	845	-	ENSDARP00000117019	224 (aa)	-	F1QRA3

Gene Model

Click here to download ENSDARG00000026842's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG
dre03015	mRNA surveillance pathway	KEGG
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000026842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000026842	acin1b	50	72.340	ENSACIG00000006218	acin1a	82	72.340	Amphilophus_citrinellus
ENSDARG00000026842	acin1b	88	69.799	ENSAMXG00000036892	acin1b	89	70.022	Astyanax_mexicanus
ENSDARG00000026842	acin1b	73	55.762	ENSCSEG00000004364	acin1b	86	54.651	Cynoglossus_semilaevis
ENSDARG00000026842	acin1b	68	62.039	ENSELUG00000003511	acin1b	82	57.866	Esox_lucius
ENSDARG00000026842	acin1b	68	60.850	ENSHBUG00000020274	acin1b	93	54.041	Haplochromis_burtoni
ENSDARG00000026842	acin1b	59	81.188	ENSHCOG00000000814	acin1b	94	80.000	Hippocampus_comes
ENSDARG00000026842	acin1b	57	87.611	ENSIPUG00000006269	acin1b	77	87.611	Ictalurus_punctatus
ENSDARG00000026842	acin1b	67	59.071	ENSKMAG00000011943	acin1b	83	57.041	Kryptolebias_marmoratus
ENSDARG00000026842	acin1b	76	58.156	ENSOMEG00000015053	acin1b	85	57.048	Oryzias_melastigma
ENSDARG00000026842	acin1b	74	57.471	ENSPKIG00000009246	-	58	50.965	Paramormyrops_kingsleyae
ENSDARG00000026842	acin1b	53	81.600	ENSPKIG00000006917	-	75	52.888	Paramormyrops_kingsleyae
ENSDARG00000026842	acin1b	67	53.882	ENSPMGG00000018777	acin1b	92	54.273	Periophthalmus_magnuspinnatus
ENSDARG00000026842	acin1b	68	60.403	ENSPNYG00000005309	acin1b	93	54.140	Pundamilia_nyererei
ENSDARG00000026842	acin1b	93	59.532	ENSPNAG00000022123	acin1b	87	66.848	Pygocentrus_nattereri
ENSDARG00000026842	acin1b	53	82.787	ENSSFOG00015006344	acin1b	66	56.842	Scleropages_formosus
ENSDARG00000026842	acin1b	75	55.054	ENSSFOG00015011452	-	62	52.862	Scleropages_formosus
ENSDARG00000026842	acin1b	59	62.153	ENSTRUG00000008622	acin1b	73	53.676	Takifugu_rubripes
ENSDARG00000026842	acin1b	58	53.965	ENSTNIG00000013841	acin1b	72	52.294	Tetraodon_nigroviridis
ENSDARG00000026842	acin1b	54	65.233	ENSXCOG00000000454	acin1b	82	58.007	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function