EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000026892 (Gene tree)
Gene ID: 436666
Gene Symbol: gpatch11
Alias: ccdc75|zgc:92714
Full Name: G patch domain containing 11
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 11984 bases
Position: chr13:50235706-50247689
Accession: ZDB-GENE-040718-89
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000034146	G-patch	PF01585.23	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000034541	-	1658	-	ENSDARP00000034146	262 (aa)	-	F1R793

Gene Model

Click here to download ENSDARG00000026892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000026892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000026892	gpatch11	98	56.589	ENSG00000152133	GPATCH11	98	55.195	Homo_sapiens
ENSDARG00000026892	gpatch11	99	71.103	ENSAPOG00000010617	gpatch11	100	72.624	Acanthochromis_polyacanthus
ENSDARG00000026892	gpatch11	98	55.814	ENSAMEG00000017542	GPATCH11	98	55.814	Ailuropoda_melanoleuca
ENSDARG00000026892	gpatch11	99	68.821	ENSACIG00000007107	gpatch11	100	69.732	Amphilophus_citrinellus
ENSDARG00000026892	gpatch11	99	73.764	ENSAOCG00000003421	gpatch11	100	72.243	Amphiprion_ocellaris
ENSDARG00000026892	gpatch11	99	73.384	ENSAPEG00000023659	gpatch11	100	71.863	Amphiprion_percula
ENSDARG00000026892	gpatch11	99	72.414	ENSATEG00000015556	gpatch11	100	72.797	Anabas_testudineus
ENSDARG00000026892	gpatch11	99	59.459	ENSAPLG00000009863	GPATCH11	98	58.687	Anas_platyrhynchos
ENSDARG00000026892	gpatch11	98	56.202	ENSANAG00000015896	GPATCH11	90	56.202	Aotus_nancymaae
ENSDARG00000026892	gpatch11	99	72.031	ENSACLG00000024037	gpatch11	100	72.031	Astatotilapia_calliptera
ENSDARG00000026892	gpatch11	100	67.176	ENSAMXG00000043007	gpatch11	100	66.412	Astyanax_mexicanus
ENSDARG00000026892	gpatch11	98	56.589	ENSBTAG00000003861	GPATCH11	98	56.589	Bos_taurus
ENSDARG00000026892	gpatch11	98	56.202	ENSCJAG00000003790	GPATCH11	92	56.202	Callithrix_jacchus
ENSDARG00000026892	gpatch11	60	53.503	ENSCAFG00000006041	GPATCH11	90	53.503	Canis_familiaris
ENSDARG00000026892	gpatch11	98	51.163	ENSCAFG00020022847	GPATCH11	98	51.550	Canis_lupus_dingo
ENSDARG00000026892	gpatch11	98	56.202	ENSCHIG00000010173	GPATCH11	99	56.202	Capra_hircus
ENSDARG00000026892	gpatch11	98	57.752	ENSTSYG00000004284	GPATCH11	99	57.752	Carlito_syrichta
ENSDARG00000026892	gpatch11	98	54.651	ENSCAPG00000009759	GPATCH11	98	54.651	Cavia_aperea
ENSDARG00000026892	gpatch11	98	56.154	ENSCPOG00000012194	GPATCH11	98	56.154	Cavia_porcellus
ENSDARG00000026892	gpatch11	98	56.589	ENSCCAG00000032499	GPATCH11	90	56.589	Cebus_capucinus
ENSDARG00000026892	gpatch11	98	56.589	ENSCATG00000041807	GPATCH11	98	56.589	Cercocebus_atys
ENSDARG00000026892	gpatch11	98	56.538	ENSCLAG00000008061	GPATCH11	98	56.154	Chinchilla_lanigera
ENSDARG00000026892	gpatch11	98	56.589	ENSCSAG00000012046	GPATCH11	98	56.589	Chlorocebus_sabaeus
ENSDARG00000026892	gpatch11	98	56.371	ENSCHOG00000004377	GPATCH11	96	57.308	Choloepus_hoffmanni
ENSDARG00000026892	gpatch11	99	58.621	ENSCPBG00000024803	GPATCH11	100	57.088	Chrysemys_picta_bellii
ENSDARG00000026892	gpatch11	98	40.996	ENSCSAVG00000005908	-	98	41.379	Ciona_savignyi
ENSDARG00000026892	gpatch11	98	50.775	ENSCANG00000039104	GPATCH11	89	50.775	Colobus_angolensis_palliatus
ENSDARG00000026892	gpatch11	98	58.140	ENSCGRG00001022189	Gpatch11	98	57.752	Cricetulus_griseus_chok1gshd
ENSDARG00000026892	gpatch11	98	58.140	ENSCGRG00000004648	Gpatch11	98	57.752	Cricetulus_griseus_crigri
ENSDARG00000026892	gpatch11	99	68.582	ENSCSEG00000012799	gpatch11	100	68.582	Cynoglossus_semilaevis
ENSDARG00000026892	gpatch11	99	72.797	ENSCVAG00000014749	gpatch11	100	73.180	Cyprinodon_variegatus
ENSDARG00000026892	gpatch11	98	56.589	ENSDNOG00000010487	GPATCH11	97	56.589	Dasypus_novemcinctus
ENSDARG00000026892	gpatch11	98	57.308	ENSDORG00000002241	Gpatch11	98	57.308	Dipodomys_ordii
ENSDARG00000026892	gpatch11	99	39.560	FBgn0037490	CG10053	100	38.828	Drosophila_melanogaster
ENSDARG00000026892	gpatch11	99	57.471	ENSEASG00005007368	GPATCH11	98	57.471	Equus_asinus_asinus
ENSDARG00000026892	gpatch11	92	56.612	ENSECAG00000013489	GPATCH11	96	56.612	Equus_caballus
ENSDARG00000026892	gpatch11	58	57.955	ENSEEUG00000007949	-	60	57.955	Erinaceus_europaeus
ENSDARG00000026892	gpatch11	100	71.321	ENSELUG00000018037	gpatch11	100	71.321	Esox_lucius
ENSDARG00000026892	gpatch11	99	58.687	ENSFALG00000011877	GPATCH11	99	57.915	Ficedula_albicollis
ENSDARG00000026892	gpatch11	98	55.814	ENSFDAG00000001096	GPATCH11	98	55.814	Fukomys_damarensis
ENSDARG00000026892	gpatch11	99	72.797	ENSFHEG00000000556	gpatch11	100	72.797	Fundulus_heteroclitus
ENSDARG00000026892	gpatch11	54	70.423	ENSGMOG00000018831	gpatch11	95	70.423	Gadus_morhua
ENSDARG00000026892	gpatch11	99	56.757	ENSGALG00000010561	GPATCH11	99	56.757	Gallus_gallus
ENSDARG00000026892	gpatch11	93	70.850	ENSGAFG00000005308	gpatch11	94	70.445	Gambusia_affinis
ENSDARG00000026892	gpatch11	55	74.825	ENSGACG00000004367	gpatch11	94	74.825	Gasterosteus_aculeatus
ENSDARG00000026892	gpatch11	99	59.073	ENSGAGG00000002120	GPATCH11	99	57.529	Gopherus_agassizii
ENSDARG00000026892	gpatch11	68	55.307	ENSGGOG00000042992	-	96	47.222	Gorilla_gorilla
ENSDARG00000026892	gpatch11	96	45.635	ENSGGOG00000005021	-	100	45.238	Gorilla_gorilla
ENSDARG00000026892	gpatch11	98	55.769	ENSHGLG00000009502	-	98	55.426	Heterocephalus_glaber_female
ENSDARG00000026892	gpatch11	98	50.000	ENSHGLG00000011210	-	99	50.385	Heterocephalus_glaber_female
ENSDARG00000026892	gpatch11	98	41.699	ENSHGLG00100005773	-	96	42.085	Heterocephalus_glaber_male
ENSDARG00000026892	gpatch11	98	55.769	ENSHGLG00100004989	-	98	55.426	Heterocephalus_glaber_male
ENSDARG00000026892	gpatch11	99	72.414	ENSHCOG00000000322	gpatch11	100	72.797	Hippocampus_comes
ENSDARG00000026892	gpatch11	100	68.702	ENSIPUG00000018626	gpatch11	100	68.702	Ictalurus_punctatus
ENSDARG00000026892	gpatch11	98	57.308	ENSSTOG00000013881	GPATCH11	98	56.923	Ictidomys_tridecemlineatus
ENSDARG00000026892	gpatch11	99	48.649	ENSJJAG00000015127	Gpatch11	98	48.659	Jaculus_jaculus
ENSDARG00000026892	gpatch11	99	69.349	ENSKMAG00000008333	gpatch11	100	68.966	Kryptolebias_marmoratus
ENSDARG00000026892	gpatch11	93	73.251	ENSLBEG00000021651	gpatch11	99	73.251	Labrus_bergylta
ENSDARG00000026892	gpatch11	99	59.004	ENSLACG00000008344	GPATCH11	99	59.004	Latimeria_chalumnae
ENSDARG00000026892	gpatch11	99	73.946	ENSLOCG00000015919	gpatch11	100	73.946	Lepisosteus_oculatus
ENSDARG00000026892	gpatch11	98	56.202	ENSLAFG00000018602	GPATCH11	98	56.202	Loxodonta_africana
ENSDARG00000026892	gpatch11	98	56.589	ENSMFAG00000043245	GPATCH11	98	56.589	Macaca_fascicularis
ENSDARG00000026892	gpatch11	98	56.589	ENSMMUG00000030867	GPATCH11	92	56.589	Macaca_mulatta
ENSDARG00000026892	gpatch11	98	51.550	ENSMNEG00000029239	GPATCH11	91	51.550	Macaca_nemestrina
ENSDARG00000026892	gpatch11	98	56.589	ENSMLEG00000043401	GPATCH11	90	56.589	Mandrillus_leucophaeus
ENSDARG00000026892	gpatch11	99	69.349	ENSMAMG00000017392	gpatch11	100	69.732	Mastacembelus_armatus
ENSDARG00000026892	gpatch11	99	71.264	ENSMZEG00005009727	gpatch11	100	71.264	Maylandia_zebra
ENSDARG00000026892	gpatch11	99	57.143	ENSMGAG00000011180	GPATCH11	99	57.088	Meleagris_gallopavo
ENSDARG00000026892	gpatch11	98	56.202	ENSMAUG00000018451	Gpatch11	98	55.769	Mesocricetus_auratus
ENSDARG00000026892	gpatch11	98	56.589	ENSMICG00000003312	GPATCH11	99	56.589	Microcebus_murinus
ENSDARG00000026892	gpatch11	98	50.388	ENSMOCG00000012750	Gpatch11	99	50.000	Microtus_ochrogaster
ENSDARG00000026892	gpatch11	99	72.797	ENSMMOG00000000729	gpatch11	100	73.563	Mola_mola
ENSDARG00000026892	gpatch11	98	56.977	ENSMODG00000015289	GPATCH11	99	56.977	Monodelphis_domestica
ENSDARG00000026892	gpatch11	99	70.115	ENSMALG00000005008	gpatch11	100	70.498	Monopterus_albus
ENSDARG00000026892	gpatch11	98	58.462	MGP_CAROLIEiJ_G0021888	Gpatch11	98	58.462	Mus_caroli
ENSDARG00000026892	gpatch11	98	57.364	ENSMUSG00000050668	Gpatch11	98	57.364	Mus_musculus
ENSDARG00000026892	gpatch11	98	57.364	MGP_SPRETEiJ_G0022801	Gpatch11	98	57.364	Mus_spretus
ENSDARG00000026892	gpatch11	98	55.039	ENSMPUG00000010020	GPATCH11	98	55.039	Mustela_putorius_furo
ENSDARG00000026892	gpatch11	99	56.757	ENSMLUG00000003506	GPATCH11	98	56.757	Myotis_lucifugus
ENSDARG00000026892	gpatch11	98	57.588	ENSNGAG00000002929	Gpatch11	98	57.588	Nannospalax_galili
ENSDARG00000026892	gpatch11	99	70.881	ENSNBRG00000012291	gpatch11	100	70.881	Neolamprologus_brichardi
ENSDARG00000026892	gpatch11	99	72.031	ENSNBRG00000019293	gpatch11	100	72.797	Neolamprologus_brichardi
ENSDARG00000026892	gpatch11	98	48.846	ENSNLEG00000035127	-	92	47.674	Nomascus_leucogenys
ENSDARG00000026892	gpatch11	91	58.577	ENSMEUG00000005748	GPATCH11	96	58.091	Notamacropus_eugenii
ENSDARG00000026892	gpatch11	99	55.172	ENSOPRG00000008150	GPATCH11	92	55.133	Ochotona_princeps
ENSDARG00000026892	gpatch11	98	56.538	ENSODEG00000011404	GPATCH11	98	56.154	Octodon_degus
ENSDARG00000026892	gpatch11	99	73.563	ENSONIG00000010082	gpatch11	100	73.563	Oreochromis_niloticus
ENSDARG00000026892	gpatch11	98	61.538	ENSOANG00000008080	GPATCH11	99	61.538	Ornithorhynchus_anatinus
ENSDARG00000026892	gpatch11	98	56.202	ENSOCUG00000007217	GPATCH11	98	56.202	Oryctolagus_cuniculus
ENSDARG00000026892	gpatch11	99	70.881	ENSORLG00000028418	gpatch11	100	70.115	Oryzias_latipes
ENSDARG00000026892	gpatch11	99	70.881	ENSORLG00020014127	gpatch11	100	70.115	Oryzias_latipes_hni
ENSDARG00000026892	gpatch11	99	70.881	ENSORLG00015023144	gpatch11	100	70.115	Oryzias_latipes_hsok
ENSDARG00000026892	gpatch11	99	72.031	ENSOMEG00000019972	gpatch11	100	72.031	Oryzias_melastigma
ENSDARG00000026892	gpatch11	98	55.814	ENSOGAG00000001387	GPATCH11	99	55.814	Otolemur_garnettii
ENSDARG00000026892	gpatch11	99	57.088	ENSOARG00000009846	GPATCH11	98	57.034	Ovis_aries
ENSDARG00000026892	gpatch11	98	56.202	ENSPPAG00000043328	GPATCH11	90	56.202	Pan_paniscus
ENSDARG00000026892	gpatch11	98	56.202	ENSPPRG00000003253	GPATCH11	92	56.202	Panthera_pardus
ENSDARG00000026892	gpatch11	98	56.977	ENSPTIG00000021056	GPATCH11	92	56.977	Panthera_tigris_altaica
ENSDARG00000026892	gpatch11	98	55.814	ENSPTRG00000011832	GPATCH11	90	55.814	Pan_troglodytes
ENSDARG00000026892	gpatch11	98	56.589	ENSPANG00000008265	GPATCH11	92	56.589	Papio_anubis
ENSDARG00000026892	gpatch11	99	73.004	ENSPKIG00000024060	gpatch11	100	73.384	Paramormyrops_kingsleyae
ENSDARG00000026892	gpatch11	99	58.301	ENSPSIG00000018046	GPATCH11	99	57.471	Pelodiscus_sinensis
ENSDARG00000026892	gpatch11	99	70.498	ENSPMGG00000001681	gpatch11	100	69.349	Periophthalmus_magnuspinnatus
ENSDARG00000026892	gpatch11	99	57.414	ENSPEMG00000011862	Gpatch11	98	57.414	Peromyscus_maniculatus_bairdii
ENSDARG00000026892	gpatch11	98	45.174	ENSPMAG00000007966	gpatch11	98	45.946	Petromyzon_marinus
ENSDARG00000026892	gpatch11	98	58.846	ENSPCIG00000010983	GPATCH11	99	58.846	Phascolarctos_cinereus
ENSDARG00000026892	gpatch11	99	72.243	ENSPFOG00000019450	gpatch11	100	69.630	Poecilia_formosa
ENSDARG00000026892	gpatch11	99	72.414	ENSPLAG00000022979	gpatch11	100	72.414	Poecilia_latipinna
ENSDARG00000026892	gpatch11	99	72.031	ENSPMEG00000013602	gpatch11	100	72.031	Poecilia_mexicana
ENSDARG00000026892	gpatch11	99	73.282	ENSPREG00000007844	gpatch11	100	73.664	Poecilia_reticulata
ENSDARG00000026892	gpatch11	98	56.589	ENSPPYG00000012494	GPATCH11	98	56.589	Pongo_abelii
ENSDARG00000026892	gpatch11	88	47.826	ENSPCAG00000012983	GPATCH11	82	47.436	Procavia_capensis
ENSDARG00000026892	gpatch11	98	57.752	ENSPCOG00000017383	GPATCH11	99	57.752	Propithecus_coquereli
ENSDARG00000026892	gpatch11	99	72.414	ENSPNYG00000014257	gpatch11	100	72.414	Pundamilia_nyererei
ENSDARG00000026892	gpatch11	100	73.485	ENSPNAG00000000500	gpatch11	100	73.004	Pygocentrus_nattereri
ENSDARG00000026892	gpatch11	98	56.977	ENSRNOG00000025317	Gpatch11	99	56.977	Rattus_norvegicus
ENSDARG00000026892	gpatch11	91	53.556	ENSRBIG00000040541	GPATCH11	90	53.556	Rhinopithecus_bieti
ENSDARG00000026892	gpatch11	98	56.202	ENSRROG00000039341	GPATCH11	98	56.202	Rhinopithecus_roxellana
ENSDARG00000026892	gpatch11	97	40.316	ENSRROG00000014332	-	100	40.316	Rhinopithecus_roxellana
ENSDARG00000026892	gpatch11	98	56.589	ENSSBOG00000029397	GPATCH11	90	56.589	Saimiri_boliviensis_boliviensis
ENSDARG00000026892	gpatch11	99	58.175	ENSSHAG00000014025	GPATCH11	100	58.175	Sarcophilus_harrisii
ENSDARG00000026892	gpatch11	99	71.103	ENSSFOG00015009032	gpatch11	100	71.103	Scleropages_formosus
ENSDARG00000026892	gpatch11	99	71.698	ENSSMAG00000010220	gpatch11	100	72.075	Scophthalmus_maximus
ENSDARG00000026892	gpatch11	99	71.970	ENSSDUG00000002757	gpatch11	100	71.970	Seriola_dumerili
ENSDARG00000026892	gpatch11	99	70.833	ENSSLDG00000024915	gpatch11	100	71.212	Seriola_lalandi_dorsalis
ENSDARG00000026892	gpatch11	99	55.985	ENSSPUG00000014858	GPATCH11	99	55.212	Sphenodon_punctatus
ENSDARG00000026892	gpatch11	99	73.585	ENSSPAG00000007690	gpatch11	100	73.585	Stegastes_partitus
ENSDARG00000026892	gpatch11	98	57.692	ENSSSCG00000008497	GPATCH11	98	57.692	Sus_scrofa
ENSDARG00000026892	gpatch11	99	58.301	ENSTGUG00000008777	GPATCH11	100	57.915	Taeniopygia_guttata
ENSDARG00000026892	gpatch11	99	68.582	ENSTRUG00000024052	gpatch11	100	68.966	Takifugu_rubripes
ENSDARG00000026892	gpatch11	99	70.115	ENSTNIG00000001655	gpatch11	99	69.732	Tetraodon_nigroviridis
ENSDARG00000026892	gpatch11	98	40.698	ENSTBEG00000014288	GPATCH11	92	40.698	Tupaia_belangeri
ENSDARG00000026892	gpatch11	98	55.426	ENSUAMG00000015138	GPATCH11	98	55.426	Ursus_americanus
ENSDARG00000026892	gpatch11	98	55.426	ENSUMAG00000014770	GPATCH11	98	55.426	Ursus_maritimus
ENSDARG00000026892	gpatch11	98	56.977	ENSVPAG00000003301	GPATCH11	96	56.589	Vicugna_pacos
ENSDARG00000026892	gpatch11	98	51.938	ENSVVUG00000018917	-	98	51.550	Vulpes_vulpes
ENSDARG00000026892	gpatch11	55	52.448	ENSVVUG00000007359	-	96	52.448	Vulpes_vulpes
ENSDARG00000026892	gpatch11	99	58.621	ENSXETG00000018544	gpatch11	100	58.621	Xenopus_tropicalis
ENSDARG00000026892	gpatch11	99	70.498	ENSXCOG00000007004	gpatch11	100	70.498	Xiphophorus_couchianus
ENSDARG00000026892	gpatch11	99	71.264	ENSXMAG00000006508	gpatch11	100	71.264	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	21873635.	IBA	Component
GO:0000776	kinetochore	-	IEA	Component
GO:0000776	kinetochore	-	ISS	Component
GO:0000777	condensed chromosome kinetochore	-	IEA	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005694	chromosome	-	IEA	Component
GO:0008150	biological_process	-	ND	Process