EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000028228 (Gene tree)
Gene ID: 100003157
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8905 bases
Position: chr13:11436130-11445034
Accession: ZDB-GENE-050419-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000141791	zf-C2H2	PF00096.26	1.8e-13	1	3
ENSDARP00000141791	zf-C2H2	PF00096.26	1.8e-13	2	3
ENSDARP00000141791	zf-C2H2	PF00096.26	1.8e-13	3	3
ENSDARP00000144804	zf-C2H2	PF00096.26	1.8e-13	1	3
ENSDARP00000144804	zf-C2H2	PF00096.26	1.8e-13	2	3
ENSDARP00000144804	zf-C2H2	PF00096.26	1.8e-13	3	3
ENSDARP00000141791	zf-met	PF12874.7	6.3e-05	1	1
ENSDARP00000144804	zf-met	PF12874.7	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138312	-	638	-	ENSDARP00000118751	185 (aa)	-	A0A0H2UKG6
ENSDART00000186463	-	2485	-	ENSDARP00000144804	537 (aa)	-	Q1L8W0
ENSDART00000169895	-	6971	-	ENSDARP00000141791	537 (aa)	-	Q1L8W0

Gene Model

Click here to download ENSDARG00000028228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000028228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000028228	zbtb18	100	73.785	ENSAPOG00000005168	zbtb18	98	72.222	Acanthochromis_polyacanthus
ENSDARG00000028228	zbtb18	100	72.101	ENSACIG00000008655	zbtb18	98	72.283	Amphilophus_citrinellus
ENSDARG00000028228	zbtb18	100	73.438	ENSAOCG00000014105	zbtb18	98	71.875	Amphiprion_ocellaris
ENSDARG00000028228	zbtb18	100	72.712	ENSAPEG00000003817	zbtb18	77	71.503	Amphiprion_percula
ENSDARG00000028228	zbtb18	100	74.520	ENSATEG00000010192	zbtb18	98	72.426	Anabas_testudineus
ENSDARG00000028228	zbtb18	100	73.298	ENSACLG00000022978	zbtb18	97	71.728	Astatotilapia_calliptera
ENSDARG00000028228	zbtb18	100	90.909	ENSAMXG00000042119	zbtb18	98	90.909	Astyanax_mexicanus
ENSDARG00000028228	zbtb18	100	74.216	ENSCSEG00000003083	zbtb18	98	72.775	Cynoglossus_semilaevis
ENSDARG00000028228	zbtb18	100	74.520	ENSCVAG00000016785	zbtb18	98	72.251	Cyprinodon_variegatus
ENSDARG00000028228	zbtb18	100	82.577	ENSELUG00000013471	zbtb18	98	82.577	Esox_lucius
ENSDARG00000028228	zbtb18	100	73.913	ENSFHEG00000020005	zbtb18	98	71.652	Fundulus_heteroclitus
ENSDARG00000028228	zbtb18	59	93.651	ENSGMOG00000018718	zbtb18	57	89.474	Gadus_morhua
ENSDARG00000028228	zbtb18	100	72.837	ENSGAFG00000000619	zbtb18	98	70.415	Gambusia_affinis
ENSDARG00000028228	zbtb18	100	73.843	ENSGACG00000010518	zbtb18	96	72.321	Gasterosteus_aculeatus
ENSDARG00000028228	zbtb18	100	73.298	ENSHBUG00000013654	zbtb18	98	71.728	Haplochromis_burtoni
ENSDARG00000028228	zbtb18	65	81.818	ENSHCOG00000002345	zbtb18	94	80.423	Hippocampus_comes
ENSDARG00000028228	zbtb18	100	76.330	ENSIPUG00000008912	zbtb18	98	75.046	Ictalurus_punctatus
ENSDARG00000028228	zbtb18	100	74.171	ENSKMAG00000002780	zbtb18	98	72.251	Kryptolebias_marmoratus
ENSDARG00000028228	zbtb18	100	73.776	ENSLBEG00000014796	zbtb18	98	71.678	Labrus_bergylta
ENSDARG00000028228	zbtb18	84	68.478	ENSMFAG00000033326	ZBTB18	98	67.609	Macaca_fascicularis
ENSDARG00000028228	zbtb18	84	69.130	ENSMMUG00000015664	ZBTB18	100	68.261	Macaca_mulatta
ENSDARG00000028228	zbtb18	100	73.822	ENSMAMG00000021720	zbtb18	98	72.426	Mastacembelus_armatus
ENSDARG00000028228	zbtb18	100	73.298	ENSMZEG00005027394	zbtb18	98	71.728	Maylandia_zebra
ENSDARG00000028228	zbtb18	96	54.776	ENSMGAG00000015389	-	100	54.369	Meleagris_gallopavo
ENSDARG00000028228	zbtb18	100	73.188	ENSMMOG00000007888	zbtb18	99	72.842	Mola_mola
ENSDARG00000028228	zbtb18	100	74.431	ENSMALG00000000725	zbtb18	98	73.638	Monopterus_albus
ENSDARG00000028228	zbtb18	100	73.822	ENSNBRG00000013796	zbtb18	100	71.902	Neolamprologus_brichardi
ENSDARG00000028228	zbtb18	100	73.473	ENSONIG00000000862	zbtb18	98	71.902	Oreochromis_niloticus
ENSDARG00000028228	zbtb18	100	73.473	ENSORLG00000027425	zbtb18	97	70.855	Oryzias_latipes
ENSDARG00000028228	zbtb18	100	73.647	ENSORLG00020011988	zbtb18	97	71.030	Oryzias_latipes_hni
ENSDARG00000028228	zbtb18	100	73.473	ENSORLG00015017457	zbtb18	97	71.030	Oryzias_latipes_hsok
ENSDARG00000028228	zbtb18	100	72.775	ENSOMEG00000011249	zbtb18	97	71.728	Oryzias_melastigma
ENSDARG00000028228	zbtb18	100	82.633	ENSPKIG00000021964	zbtb18	95	80.439	Paramormyrops_kingsleyae
ENSDARG00000028228	zbtb18	100	60.037	ENSPKIG00000008787	-	100	59.590	Paramormyrops_kingsleyae
ENSDARG00000028228	zbtb18	100	74.229	ENSPMGG00000008020	zbtb18	100	73.140	Periophthalmus_magnuspinnatus
ENSDARG00000028228	zbtb18	100	72.569	ENSPFOG00000022080	zbtb18	100	70.804	Poecilia_formosa
ENSDARG00000028228	zbtb18	100	72.662	ENSPLAG00000020960	zbtb18	100	72.093	Poecilia_latipinna
ENSDARG00000028228	zbtb18	100	72.662	ENSPLAG00000011299	-	100	72.093	Poecilia_latipinna
ENSDARG00000028228	zbtb18	100	73.217	ENSPMEG00000007554	zbtb18	100	70.783	Poecilia_mexicana
ENSDARG00000028228	zbtb18	100	72.997	ENSPREG00000008576	zbtb18	98	70.557	Poecilia_reticulata
ENSDARG00000028228	zbtb18	100	73.298	ENSPNYG00000001530	zbtb18	98	71.728	Pundamilia_nyererei
ENSDARG00000028228	zbtb18	88	86.975	ENSPNAG00000014066	zbtb18	89	86.975	Pygocentrus_nattereri
ENSDARG00000028228	zbtb18	100	74.824	ENSSMAG00000018041	zbtb18	100	73.063	Scophthalmus_maximus
ENSDARG00000028228	zbtb18	100	74.138	ENSSDUG00000018660	zbtb18	100	72.241	Seriola_dumerili
ENSDARG00000028228	zbtb18	100	74.346	ENSSLDG00000022573	zbtb18	100	72.426	Seriola_lalandi_dorsalis
ENSDARG00000028228	zbtb18	96	53.950	ENSSPUG00000010554	-	100	52.805	Sphenodon_punctatus
ENSDARG00000028228	zbtb18	100	74.520	ENSSPAG00000002691	zbtb18	98	72.600	Stegastes_partitus
ENSDARG00000028228	zbtb18	100	74.695	ENSTRUG00000020604	zbtb18	100	72.600	Takifugu_rubripes
ENSDARG00000028228	zbtb18	100	75.719	ENSTNIG00000000430	zbtb18	98	75.181	Tetraodon_nigroviridis
ENSDARG00000028228	zbtb18	100	72.482	ENSXCOG00000013308	zbtb18	100	71.763	Xiphophorus_couchianus
ENSDARG00000028228	zbtb18	100	72.395	ENSXMAG00000018241	zbtb18	99	71.818	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function