EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000028295 (Gene tree)
Gene ID
559882
Gene Symbol
mkrn4
Alias
fi27c05|si:ch73-237c6.4|wu:fi27c05
Full Name
makorin%2C ring finger protein%2C 4
Gene Type
protein_coding
Species
Danio_rerio
Status
confidence
Strand
Plus strand
Length
5257 bases
Position
chr8:23725957-23731213
Accession
ZDB-GENE-030131-5954
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000114369zf-CCCHPF00642.242.6e-0911
ENSDARP00000095121zf-CCCHPF00642.249.4e-0911
ENSDARP00000116299zf-CCCHPF00642.241.5e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
28381614Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transitionZGA & embryo2017 Apr 5Despic VDOI: 10.1101/gr.215954.116
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000104346-1845XM_005167043ENSDARP00000095121397 (aa)XP_005167100A9C4A6
ENSDART00000142395-536-ENSDARP00000116299161 (aa)-A9C4A8
ENSDART00000132734-575-ENSDARP00000114369161 (aa)-A9C4A7
Gene Model
Click here to download ENSDARG00000028295's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000028295's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000028295mkrn48330.267ENSDARG00000041665mkrn16448.936
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000028295mkrn48331.129ENSG00000133606MKRN18230.000Homo_sapiens
ENSDARG00000028295mkrn49640.155ENSAPOG00000006267mkrn48643.413Acanthochromis_polyacanthus
ENSDARG00000028295mkrn48231.356ENSAMEG00000017832-7932.597Ailuropoda_melanoleuca
ENSDARG00000028295mkrn48146.617ENSACIG00000001902mkrn49542.687Amphilophus_citrinellus
ENSDARG00000028295mkrn49840.994ENSAOCG00000013661mkrn48036.012Amphiprion_ocellaris
ENSDARG00000028295mkrn49542.257ENSAPEG00000019319mkrn48544.545Amphiprion_percula
ENSDARG00000028295mkrn49344.000ENSATEG00000020555mkrn48044.311Anabas_testudineus
ENSDARG00000028295mkrn45634.066ENSATEG00000009352mkrn28830.376Anabas_testudineus
ENSDARG00000028295mkrn46140.252ENSACAG00000013310MKRN25039.355Anolis_carolinensis
ENSDARG00000028295mkrn49436.306ENSACAG00000002322-8041.076Anolis_carolinensis
ENSDARG00000028295mkrn48230.704ENSANAG00000036978MKRN17932.113Aotus_nancymaae
ENSDARG00000028295mkrn49740.967ENSACLG00000002368mkrn48144.411Astatotilapia_calliptera
ENSDARG00000028295mkrn49252.688ENSAMXG00000007674mkrn48354.627Astyanax_mexicanus
ENSDARG00000028295mkrn48431.014ENSAMXG00000032974mkrn17630.508Astyanax_mexicanus
ENSDARG00000028295mkrn49130.513ENSAMXG00000005535mkrn29030.026Astyanax_mexicanus
ENSDARG00000028295mkrn48331.519ENSBTAG00000008306MKRN16832.320Bos_taurus
ENSDARG00000028295mkrn48330.833ENSCJAG00000013474MKRN16932.500Callithrix_jacchus
ENSDARG00000028295mkrn48331.461ENSCAFG00000003953-6832.213Canis_familiaris
ENSDARG00000028295mkrn48231.268ENSCAFG00000007296-7931.933Canis_familiaris
ENSDARG00000028295mkrn48231.445ENSCAFG00020022139-7432.203Canis_lupus_dingo
ENSDARG00000028295mkrn48631.268ENSCHIG00000024804-7831.232Capra_hircus
ENSDARG00000028295mkrn48230.532ENSTSYG00000009996-7931.285Carlito_syrichta
ENSDARG00000028295mkrn47041.935ENSTSYG00000007429MKRN25341.935Carlito_syrichta
ENSDARG00000028295mkrn48231.549ENSCAPG00000017879MKRN17931.831Cavia_aperea
ENSDARG00000028295mkrn49230.556ENSCAPG00000010425MKRN29031.347Cavia_aperea
ENSDARG00000028295mkrn49030.513ENSCPOG00000001208MKRN29131.152Cavia_porcellus
ENSDARG00000028295mkrn48331.856ENSCPOG00000000948MKRN17931.638Cavia_porcellus
ENSDARG00000028295mkrn48331.667ENSCCAG00000037582MKRN16931.755Cebus_capucinus
ENSDARG00000028295mkrn48638.806ENSCCAG00000009054-7530.585Cebus_capucinus
ENSDARG00000028295mkrn48530.518ENSCATG00000035935-7431.522Cercocebus_atys
ENSDARG00000028295mkrn48331.129ENSCATG00000039778MKRN17932.113Cercocebus_atys
ENSDARG00000028295mkrn49130.848ENSCLAG00000008755MKRN29031.701Chinchilla_lanigera
ENSDARG00000028295mkrn48230.508ENSCSAG00000008246MKRN17932.113Chlorocebus_sabaeus
ENSDARG00000028295mkrn48331.198ENSCHOG00000011015-6932.500Choloepus_hoffmanni
ENSDARG00000028295mkrn48840.278ENSCPBG00000017873-9241.115Chrysemys_picta_bellii
ENSDARG00000028295mkrn45130.488ENSCING00000007190-6730.330Ciona_intestinalis
ENSDARG00000028295mkrn48330.571ENSCANG00000022805-7031.988Colobus_angolensis_palliatus
ENSDARG00000028295mkrn49439.096ENSCSEG00000001896mkrn48340.762Cynoglossus_semilaevis
ENSDARG00000028295mkrn45733.333ENSCVAG00000007296mkrn17430.994Cyprinodon_variegatus
ENSDARG00000028295mkrn48530.682ENSDORG00000003480Mkrn17930.769Dipodomys_ordii
ENSDARG00000028295mkrn48331.285ENSEASG00005009917-6932.222Equus_asinus_asinus
ENSDARG00000028295mkrn49447.436ENSELUG00000011371mkrn48945.767Esox_lucius
ENSDARG00000028295mkrn48331.034ENSFCAG00000024942-6930.933Felis_catus
ENSDARG00000028295mkrn48336.418ENSFALG00000003685-7537.500Ficedula_albicollis
ENSDARG00000028295mkrn48330.641ENSFALG00000003717MKRN17631.092Ficedula_albicollis
ENSDARG00000028295mkrn48231.356ENSFDAG00000014968MKRN17932.676Fukomys_damarensis
ENSDARG00000028295mkrn49131.579ENSFDAG00000011613MKRN29130.905Fukomys_damarensis
ENSDARG00000028295mkrn46237.572ENSFHEG00000006905mkrn28730.163Fundulus_heteroclitus
ENSDARG00000028295mkrn48440.719ENSFHEG00000004528mkrn48140.979Fundulus_heteroclitus
ENSDARG00000028295mkrn47038.989ENSGMOG00000008221-9938.628Gadus_morhua
ENSDARG00000028295mkrn45245.113ENSGALG00000012852MKRN17231.034Gallus_gallus
ENSDARG00000028295mkrn49538.259ENSGAFG00000004107mkrn48341.033Gambusia_affinis
ENSDARG00000028295mkrn47139.474ENSGACG00000008285mkrn49937.456Gasterosteus_aculeatus
ENSDARG00000028295mkrn48340.950ENSGAGG00000010951-7841.471Gopherus_agassizii
ENSDARG00000028295mkrn45841.290ENSGAGG00000022563MKRN25042.857Gopherus_agassizii
ENSDARG00000028295mkrn48531.793ENSGGOG00000024940-8431.250Gorilla_gorilla
ENSDARG00000028295mkrn48530.214ENSGGOG00000023977MKRN17932.113Gorilla_gorilla
ENSDARG00000028295mkrn49342.105ENSHBUG00000022825mkrn48144.411Haplochromis_burtoni
ENSDARG00000028295mkrn48230.028ENSHGLG00000011503-7930.028Heterocephalus_glaber_female
ENSDARG00000028295mkrn49131.807ENSHGLG00000018194MKRN29131.620Heterocephalus_glaber_female
ENSDARG00000028295mkrn48230.226ENSHGLG00100019127-7930.226Heterocephalus_glaber_male
ENSDARG00000028295mkrn49131.807ENSHGLG00100004036MKRN29131.620Heterocephalus_glaber_male
ENSDARG00000028295mkrn48441.194ENSHCOG00000008354mkrn47842.121Hippocampus_comes
ENSDARG00000028295mkrn49131.266ENSIPUG00000011589mkrn29030.179Ictalurus_punctatus
ENSDARG00000028295mkrn49661.006ENSIPUG00000000711mkrn49057.065Ictalurus_punctatus
ENSDARG00000028295mkrn48332.738ENSJJAG00000010761-6634.328Jaculus_jaculus
ENSDARG00000028295mkrn48240.854ENSKMAG00000007023mkrn48642.121Kryptolebias_marmoratus
ENSDARG00000028295mkrn49441.425ENSLBEG00000014889mkrn48142.899Labrus_bergylta
ENSDARG00000028295mkrn410050.490ENSLOCG00000000455mkrn49650.256Lepisosteus_oculatus
ENSDARG00000028295mkrn49530.102ENSLOCG00000016132mkrn17432.143Lepisosteus_oculatus
ENSDARG00000028295mkrn49134.228ENSLAFG00000018408MKRN17132.778Loxodonta_africana
ENSDARG00000028295mkrn48231.006ENSMFAG00000000737MKRN17932.303Macaca_fascicularis
ENSDARG00000028295mkrn48231.006ENSMMUG00000010420MKRN17032.303Macaca_mulatta
ENSDARG00000028295mkrn48346.154ENSMNEG00000040268MKRN17931.818Macaca_nemestrina
ENSDARG00000028295mkrn48330.168ENSMLEG00000041667-7830.978Mandrillus_leucophaeus
ENSDARG00000028295mkrn48230.726ENSMLEG00000033107MKRN17932.022Mandrillus_leucophaeus
ENSDARG00000028295mkrn49438.400ENSMAMG00000011051mkrn48840.000Mastacembelus_armatus
ENSDARG00000028295mkrn48345.588ENSMZEG00005001958mkrn48645.317Maylandia_zebra
ENSDARG00000028295mkrn45648.000ENSMAUG00000014200Mkrn25047.170Mesocricetus_auratus
ENSDARG00000028295mkrn48831.724ENSMICG00000012164MKRN26741.935Microcebus_murinus
ENSDARG00000028295mkrn49530.095ENSMICG00000002114MKRN16932.044Microcebus_murinus
ENSDARG00000028295mkrn48231.161ENSMOCG00000006155Mkrn17931.445Microtus_ochrogaster
ENSDARG00000028295mkrn48147.328ENSMMOG00000004759mkrn49053.608Mola_mola
ENSDARG00000028295mkrn49440.625ENSMALG00000018791mkrn48543.064Monopterus_albus
ENSDARG00000028295mkrn48331.198MGP_CAROLIEiJ_G0028246Mkrn18230.169Mus_caroli
ENSDARG00000028295mkrn48331.198ENSMUSG00000029922Mkrn18230.169Mus_musculus
ENSDARG00000028295mkrn48330.362MGP_PahariEiJ_G0022004Mkrn17930.312Mus_pahari
ENSDARG00000028295mkrn48331.476MGP_SPRETEiJ_G0029245Mkrn18230.169Mus_spretus
ENSDARG00000028295mkrn48231.534ENSMPUG00000003453-7932.113Mustela_putorius_furo
ENSDARG00000028295mkrn48232.727ENSMLUG00000023455-10031.722Myotis_lucifugus
ENSDARG00000028295mkrn48230.899ENSMLUG00000006053-7932.773Myotis_lucifugus
ENSDARG00000028295mkrn48332.312ENSNGAG00000019077Mkrn17032.402Nannospalax_galili
ENSDARG00000028295mkrn45444.444ENSNGAG00000012579Mkrn25047.170Nannospalax_galili
ENSDARG00000028295mkrn49440.369ENSNBRG00000010946mkrn49641.207Neolamprologus_brichardi
ENSDARG00000028295mkrn48331.129ENSNLEG00000001921MKRN16932.500Nomascus_leucogenys
ENSDARG00000028295mkrn48331.006ENSOPRG00000010353MKRN16932.493Ochotona_princeps
ENSDARG00000028295mkrn49032.208ENSODEG00000002702MKRN29132.208Octodon_degus
ENSDARG00000028295mkrn48630.141ENSONIG00000014150mkrn17430.321Oreochromis_niloticus
ENSDARG00000028295mkrn49441.223ENSONIG00000011870mkrn48645.015Oreochromis_niloticus
ENSDARG00000028295mkrn49131.139ENSOCUG00000014171MKRN29130.964Oryctolagus_cuniculus
ENSDARG00000028295mkrn49740.404ENSORLG00000006615mkrn48643.732Oryzias_latipes
ENSDARG00000028295mkrn45737.363ENSORLG00000012765mkrn15040.816Oryzias_latipes
ENSDARG00000028295mkrn49740.415ENSORLG00020010514mkrn48444.144Oryzias_latipes_hni
ENSDARG00000028295mkrn47136.957ENSORLG00020020446mkrn15040.816Oryzias_latipes_hni
ENSDARG00000028295mkrn49740.206ENSORLG00015002476mkrn48442.814Oryzias_latipes_hsok
ENSDARG00000028295mkrn49530.073ENSOMEG00000001704mkrn28830.412Oryzias_melastigma
ENSDARG00000028295mkrn49737.275ENSOMEG00000020049mkrn48438.855Oryzias_melastigma
ENSDARG00000028295mkrn48330.303ENSOGAG00000009877-6831.667Otolemur_garnettii
ENSDARG00000028295mkrn48235.928ENSOGAG00000024631-9936.036Otolemur_garnettii
ENSDARG00000028295mkrn48230.579ENSOARG00000013095-7931.389Ovis_aries
ENSDARG00000028295mkrn46141.333ENSOARG00000015759MKRN26440.645Ovis_aries
ENSDARG00000028295mkrn48330.939ENSPPAG00000041897-8432.102Pan_paniscus
ENSDARG00000028295mkrn48230.812ENSPPAG00000040448MKRN17931.921Pan_paniscus
ENSDARG00000028295mkrn48230.725ENSPTIG00000010774-6830.458Panthera_tigris_altaica
ENSDARG00000028295mkrn48330.939ENSPTRG00000042822-7931.921Pan_troglodytes
ENSDARG00000028295mkrn48330.939ENSPTRG00000019766MKRN17931.921Pan_troglodytes
ENSDARG00000028295mkrn48330.939ENSPTRG00000044764-7532.258Pan_troglodytes
ENSDARG00000028295mkrn48331.129ENSPANG00000017280MKRN16932.500Papio_anubis
ENSDARG00000028295mkrn48530.790ENSPANG00000010629-7431.793Papio_anubis
ENSDARG00000028295mkrn410053.086ENSPKIG00000016323mkrn49350.000Paramormyrops_kingsleyae
ENSDARG00000028295mkrn49239.604ENSPMGG00000016333-6445.312Periophthalmus_magnuspinnatus
ENSDARG00000028295mkrn48330.641ENSPEMG00000023646Mkrn17032.123Peromyscus_maniculatus_bairdii
ENSDARG00000028295mkrn48330.606ENSPCIG00000021244-8230.588Phascolarctos_cinereus
ENSDARG00000028295mkrn49538.522ENSPFOG00000024691mkrn48340.541Poecilia_formosa
ENSDARG00000028295mkrn47730.303ENSPFOG00000012571mkrn28030.973Poecilia_formosa
ENSDARG00000028295mkrn47730.303ENSPLAG00000013770mkrn28030.973Poecilia_latipinna
ENSDARG00000028295mkrn49538.522ENSPLAG00000013447mkrn48340.729Poecilia_latipinna
ENSDARG00000028295mkrn49539.211ENSPMEG00000014195mkrn48340.841Poecilia_mexicana
ENSDARG00000028295mkrn48330.882ENSPMEG00000002644mkrn28831.176Poecilia_mexicana
ENSDARG00000028295mkrn49538.889ENSPREG00000022638mkrn48341.265Poecilia_reticulata
ENSDARG00000028295mkrn46632.710ENSPREG00000021199mkrn28030.588Poecilia_reticulata
ENSDARG00000028295mkrn48231.831ENSPPYG00000018057MKRN17932.676Pongo_abelii
ENSDARG00000028295mkrn48430.518ENSPPYG00000020255-7230.563Pongo_abelii
ENSDARG00000028295mkrn48832.168ENSPCAG00000014683MKRN17932.303Procavia_capensis
ENSDARG00000028295mkrn48331.111ENSPCOG00000013481MKRN28331.667Propithecus_coquereli
ENSDARG00000028295mkrn48332.033ENSPCOG00000002890-7032.033Propithecus_coquereli
ENSDARG00000028295mkrn47631.310ENSPVAG00000011185-6330.211Pteropus_vampyrus
ENSDARG00000028295mkrn48345.588ENSPNYG00000022367mkrn48644.411Pundamilia_nyererei
ENSDARG00000028295mkrn48330.321ENSPNAG00000008708mkrn17630.659Pygocentrus_nattereri
ENSDARG00000028295mkrn49655.039ENSPNAG00000017925mkrn48358.209Pygocentrus_nattereri
ENSDARG00000028295mkrn48331.492ENSRNOG00000009280Mkrn16932.869Rattus_norvegicus
ENSDARG00000028295mkrn48231.006ENSRBIG00000027680-7932.303Rhinopithecus_bieti
ENSDARG00000028295mkrn48330.168ENSRROG00000039237-6930.252Rhinopithecus_roxellana
ENSDARG00000028295mkrn48231.006ENSRROG00000037557-7932.113Rhinopithecus_roxellana
ENSDARG00000028295mkrn48638.806ENSSBOG00000027711-7230.585Saimiri_boliviensis_boliviensis
ENSDARG00000028295mkrn45167.722ENSSFOG00015022480mkrn48365.217Scleropages_formosus
ENSDARG00000028295mkrn49440.107ENSSMAG00000019369mkrn48141.141Scophthalmus_maximus
ENSDARG00000028295mkrn49441.711ENSSDUG00000010454mkrn48642.647Seriola_dumerili
ENSDARG00000028295mkrn45535.227ENSSDUG00000018541mkrn17430.030Seriola_dumerili
ENSDARG00000028295mkrn49346.000ENSSLDG00000004587mkrn48243.750Seriola_lalandi_dorsalis
ENSDARG00000028295mkrn45535.227ENSSLDG00000014411mkrn17430.030Seriola_lalandi_dorsalis
ENSDARG00000028295mkrn48732.303ENSSPUG00000004045MKRN17232.743Sphenodon_punctatus
ENSDARG00000028295mkrn48443.785ENSSPUG00000013809-7942.735Sphenodon_punctatus
ENSDARG00000028295mkrn48331.285ENSSSCG00000016498-7931.921Sus_scrofa
ENSDARG00000028295mkrn45142.857ENSTGUG00000004017MKRN25142.857Taeniopygia_guttata
ENSDARG00000028295mkrn48230.447ENSTGUG00000011669MKRN17930.899Taeniopygia_guttata
ENSDARG00000028295mkrn48438.739ENSTRUG00000025139mkrn49338.739Takifugu_rubripes
ENSDARG00000028295mkrn47530.769ENSTBEG00000004564-9932.000Tupaia_belangeri
ENSDARG00000028295mkrn48331.653ENSUAMG00000013944-6932.418Ursus_americanus
ENSDARG00000028295mkrn48231.534ENSUMAG00000015046-7932.033Ursus_maritimus
ENSDARG00000028295mkrn48230.878ENSVVUG00000001720-8831.461Vulpes_vulpes
ENSDARG00000028295mkrn48242.202ENSXCOG00000006365mkrn48340.729Xiphophorus_couchianus
ENSDARG00000028295mkrn49640.764ENSXMAG00000010448mkrn49140.729Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0046872metal ion binding-IEAFunction

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