EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000028517 (Gene tree)
Gene ID
554137
Gene Symbol
hbp1
Alias
wu:fj62c10|zgc:112297
Full Name
HMG-box transcription factor 1
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
20952 bases
Position
chr25:3449959-3470910
Accession
ZDB-GENE-050522-414
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000148354AXHPF08517.129.3e-3411
ENSDARP00000152088AXHPF08517.129.3e-3411
ENSDARP00000039092AXHPF08517.129.6e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000186737-1609-ENSDARP00000152088481 (aa)-A0A2R8RSV0
ENSDART00000186738-3403-ENSDARP00000148354481 (aa)-A0A2R8RSV0
ENSDART00000029067-1609-ENSDARP00000039092494 (aa)-F1QK54
Gene Model
Click here to download ENSDARG00000028517's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000028517's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000028517hbp110063.689ENSG00000105856HBP19671.622Homo_sapiens
ENSDARG00000028517hbp19577.609ENSAPOG00000015816hbp19977.342Acanthochromis_polyacanthus
ENSDARG00000028517hbp110063.619ENSAMEG00000013492HBP19963.760Ailuropoda_melanoleuca
ENSDARG00000028517hbp19960.950ENSACIG00000019093-9660.870Amphilophus_citrinellus
ENSDARG00000028517hbp19578.261ENSACIG00000018873hbp19276.253Amphilophus_citrinellus
ENSDARG00000028517hbp19577.174ENSAOCG00000010889hbp19976.906Amphiprion_ocellaris
ENSDARG00000028517hbp110061.886ENSAOCG00000001429-9961.100Amphiprion_ocellaris
ENSDARG00000028517hbp110061.736ENSAPEG00000022589-9960.552Amphiprion_percula
ENSDARG00000028517hbp19576.957ENSAPEG00000002330hbp19976.688Amphiprion_percula
ENSDARG00000028517hbp19961.200ENSATEG00000003902-9662.661Anabas_testudineus
ENSDARG00000028517hbp19576.957ENSATEG00000016411hbp19976.688Anabas_testudineus
ENSDARG00000028517hbp110064.286ENSAPLG00000007110HBP110063.900Anas_platyrhynchos
ENSDARG00000028517hbp19962.403ENSACAG00000015023HBP19961.628Anolis_carolinensis
ENSDARG00000028517hbp110063.495ENSANAG00000022302HBP18975.214Aotus_nancymaae
ENSDARG00000028517hbp19776.759ENSACLG00000004758hbp19776.333Astatotilapia_calliptera
ENSDARG00000028517hbp110061.448ENSACLG00000003606HBP110061.057Astatotilapia_calliptera
ENSDARG00000028517hbp110082.857ENSAMXG00000017678hbp110082.306Astyanax_mexicanus
ENSDARG00000028517hbp110063.353ENSBTAG00000005524HBP110063.118Bos_taurus
ENSDARG00000028517hbp110063.689ENSCJAG00000016260HBP19075.214Callithrix_jacchus
ENSDARG00000028517hbp110063.938ENSCAFG00000003939HBP110063.688Canis_familiaris
ENSDARG00000028517hbp110063.938ENSCAFG00020023119HBP110063.688Canis_lupus_dingo
ENSDARG00000028517hbp110063.353ENSCHIG00000024405HBP110063.353Capra_hircus
ENSDARG00000028517hbp110062.984ENSTSYG00000010057HBP110062.597Carlito_syrichta
ENSDARG00000028517hbp110062.646ENSCAPG00000017460HBP19962.791Cavia_aperea
ENSDARG00000028517hbp110063.230ENSCPOG00000002375HBP110062.998Cavia_porcellus
ENSDARG00000028517hbp110063.883ENSCCAG00000026359HBP19075.214Cebus_capucinus
ENSDARG00000028517hbp110063.883ENSCATG00000021910HBP110063.495Cercocebus_atys
ENSDARG00000028517hbp110063.320ENSCLAG00000005170HBP110063.107Chinchilla_lanigera
ENSDARG00000028517hbp110063.883ENSCSAG00000011395HBP110063.258Chlorocebus_sabaeus
ENSDARG00000028517hbp17092.308ENSCHOG00000006820HBP17092.308Choloepus_hoffmanni
ENSDARG00000028517hbp110064.990ENSCPBG00000000954HBP110064.340Chrysemys_picta_bellii
ENSDARG00000028517hbp110064.078ENSCANG00000022804HBP110063.689Colobus_angolensis_palliatus
ENSDARG00000028517hbp110063.760ENSCGRG00001014437Hbp110062.571Cricetulus_griseus_chok1gshd
ENSDARG00000028517hbp110063.760ENSCGRG00000013859Hbp110062.571Cricetulus_griseus_crigri
ENSDARG00000028517hbp19575.435ENSCSEG00000003373hbp110075.217Cynoglossus_semilaevis
ENSDARG00000028517hbp19578.043ENSCVAG00000008930hbp19976.035Cyprinodon_variegatus
ENSDARG00000028517hbp110061.837ENSCVAG00000008501-9961.350Cyprinodon_variegatus
ENSDARG00000028517hbp110063.107ENSDNOG00000004405HBP19662.863Dasypus_novemcinctus
ENSDARG00000028517hbp16958.989ENSDORG00000010576Hbp19957.766Dipodomys_ordii
ENSDARG00000028517hbp110057.087ENSETEG00000018542HBP110056.699Echinops_telfairi
ENSDARG00000028517hbp19346.138ENSEBUG00000016475hbp18446.138Eptatretus_burgeri
ENSDARG00000028517hbp110063.813ENSEASG00005017469HBP19363.567Equus_asinus_asinus
ENSDARG00000028517hbp110063.813ENSECAG00000020969HBP19963.953Equus_caballus
ENSDARG00000028517hbp19677.371ENSELUG00000006967hbp19975.325Esox_lucius
ENSDARG00000028517hbp19964.386ENSELUG00000017031-9263.380Esox_lucius
ENSDARG00000028517hbp110063.230ENSFCAG00000005858HBP19263.372Felis_catus
ENSDARG00000028517hbp19964.023ENSFALG00000010259HBP110063.089Ficedula_albicollis
ENSDARG00000028517hbp110063.107ENSFDAG00000007897HBP110062.879Fukomys_damarensis
ENSDARG00000028517hbp19961.167ENSFHEG00000014389-9961.167Fundulus_heteroclitus
ENSDARG00000028517hbp19577.124ENSFHEG00000008222hbp19976.471Fundulus_heteroclitus
ENSDARG00000028517hbp19574.783ENSGMOG00000013782hbp110072.985Gadus_morhua
ENSDARG00000028517hbp110065.058ENSGALG00000008050HBP110063.653Gallus_gallus
ENSDARG00000028517hbp110061.741ENSGAFG00000004651-9961.741Gambusia_affinis
ENSDARG00000028517hbp19578.214ENSGAFG00000021976hbp19977.560Gambusia_affinis
ENSDARG00000028517hbp19960.455ENSGACG00000019192-9960.248Gasterosteus_aculeatus
ENSDARG00000028517hbp19573.333ENSGACG00000010054hbp110073.491Gasterosteus_aculeatus
ENSDARG00000028517hbp110064.933ENSGAGG00000023042HBP110064.286Gopherus_agassizii
ENSDARG00000028517hbp110063.495ENSGGOG00000007788HBP19173.554Gorilla_gorilla
ENSDARG00000028517hbp19578.431ENSHBUG00000004967hbp19577.996Haplochromis_burtoni
ENSDARG00000028517hbp110061.493ENSHBUG00000016198-10060.904Haplochromis_burtoni
ENSDARG00000028517hbp110063.301ENSHGLG00000019188HBP110062.689Heterocephalus_glaber_female
ENSDARG00000028517hbp110063.301ENSHGLG00100001912HBP110062.689Heterocephalus_glaber_male
ENSDARG00000028517hbp110048.031ENSHGLG00100014672-10048.031Heterocephalus_glaber_male
ENSDARG00000028517hbp19955.031ENSHCOG00000010740-9454.527Hippocampus_comes
ENSDARG00000028517hbp19571.087ENSHCOG00000011877hbp110071.584Hippocampus_comes
ENSDARG00000028517hbp110083.469ENSIPUG00000023044hbp110083.101Ictalurus_punctatus
ENSDARG00000028517hbp110063.689ENSSTOG00000013846HBP110062.879Ictidomys_tridecemlineatus
ENSDARG00000028517hbp110063.689ENSJJAG00000015341Hbp110063.068Jaculus_jaculus
ENSDARG00000028517hbp19578.913ENSKMAG00000003132hbp19977.124Kryptolebias_marmoratus
ENSDARG00000028517hbp19463.216ENSKMAG00000000266-9462.775Kryptolebias_marmoratus
ENSDARG00000028517hbp110061.323ENSLBEG00000023959-10061.924Labrus_bergylta
ENSDARG00000028517hbp19578.696ENSLBEG00000012078hbp19976.906Labrus_bergylta
ENSDARG00000028517hbp110065.310ENSLACG00000009119HBP19864.839Latimeria_chalumnae
ENSDARG00000028517hbp110071.820ENSLOCG00000015822hbp110071.048Lepisosteus_oculatus
ENSDARG00000028517hbp110061.822ENSLAFG00000005317HBP110061.047Loxodonta_africana
ENSDARG00000028517hbp110063.883ENSMFAG00000030375HBP19273.967Macaca_fascicularis
ENSDARG00000028517hbp19963.922ENSMMUG00000015409HBP19863.672Macaca_mulatta
ENSDARG00000028517hbp110061.386ENSMNEG00000037516HBP110060.990Macaca_nemestrina
ENSDARG00000028517hbp110064.272ENSMLEG00000031993HBP110063.883Mandrillus_leucophaeus
ENSDARG00000028517hbp19578.214ENSMAMG00000023227hbp110077.778Mastacembelus_armatus
ENSDARG00000028517hbp110059.302ENSMAMG00000023588-9162.420Mastacembelus_armatus
ENSDARG00000028517hbp110061.448ENSMZEG00005015065HBP110061.057Maylandia_zebra
ENSDARG00000028517hbp19676.774ENSMZEG00005005999hbp18176.344Maylandia_zebra
ENSDARG00000028517hbp110064.865ENSMGAG00000006880HBP19863.584Meleagris_gallopavo
ENSDARG00000028517hbp110062.597ENSMAUG00000011449Hbp110062.004Mesocricetus_auratus
ENSDARG00000028517hbp110063.495ENSMICG00000012858HBP19373.554Microcebus_murinus
ENSDARG00000028517hbp110063.566ENSMOCG00000019227Hbp110062.949Microtus_ochrogaster
ENSDARG00000028517hbp19974.214ENSMMOG00000012207hbp110071.224Mola_mola
ENSDARG00000028517hbp19463.341ENSMMOG00000010239-9862.826Mola_mola
ENSDARG00000028517hbp110063.443ENSMODG00000016376HBP19162.453Monodelphis_domestica
ENSDARG00000028517hbp19561.987ENSMALG00000010834-9561.555Monopterus_albus
ENSDARG00000028517hbp19577.657ENSMALG00000009884hbp110075.870Monopterus_albus
ENSDARG00000028517hbp110063.056MGP_CAROLIEiJ_G0017683Hbp110062.453Mus_caroli
ENSDARG00000028517hbp110063.056ENSMUSG00000002996Hbp110062.453Mus_musculus
ENSDARG00000028517hbp110063.372MGP_PahariEiJ_G0029441Hbp110062.760Mus_pahari
ENSDARG00000028517hbp110063.056MGP_SPRETEiJ_G0018525Hbp110062.453Mus_spretus
ENSDARG00000028517hbp110064.008ENSMPUG00000018249HBP110063.757Mustela_putorius_furo
ENSDARG00000028517hbp110063.813ENSMLUG00000012425HBP19863.566Myotis_lucifugus
ENSDARG00000028517hbp110063.301ENSNGAG00000023485Hbp110062.689Nannospalax_galili
ENSDARG00000028517hbp110062.427ENSNBRG00000017820-10062.035Neolamprologus_brichardi
ENSDARG00000028517hbp19578.431ENSNBRG00000001405hbp19577.996Neolamprologus_brichardi
ENSDARG00000028517hbp110063.883ENSNLEG00000008761HBP19173.554Nomascus_leucogenys
ENSDARG00000028517hbp18959.395ENSMEUG00000011116HBP19058.963Notamacropus_eugenii
ENSDARG00000028517hbp17092.308ENSOPRG00000005315HBP17092.308Ochotona_princeps
ENSDARG00000028517hbp19948.354ENSODEG00000010517-9947.119Octodon_degus
ENSDARG00000028517hbp19952.905ENSODEG00000000482-9953.320Octodon_degus
ENSDARG00000028517hbp110063.495ENSODEG00000001327-10062.879Octodon_degus
ENSDARG00000028517hbp19578.261ENSONIG00000008523hbp19977.996Oreochromis_niloticus
ENSDARG00000028517hbp110061.829ENSONIG00000011868-10061.034Oreochromis_niloticus
ENSDARG00000028517hbp110062.818ENSOANG00000003174HBP110062.818Ornithorhynchus_anatinus
ENSDARG00000028517hbp110063.107ENSOCUG00000012758HBP110063.672Oryctolagus_cuniculus
ENSDARG00000028517hbp19575.381ENSORLG00000004396hbp19974.946Oryzias_latipes
ENSDARG00000028517hbp110060.321ENSORLG00000009474-9959.319Oryzias_latipes
ENSDARG00000028517hbp19576.304ENSORLG00020000370hbp19974.728Oryzias_latipes_hni
ENSDARG00000028517hbp110060.721ENSORLG00020004269-9959.719Oryzias_latipes_hni
ENSDARG00000028517hbp19574.946ENSORLG00015006557hbp19974.510Oryzias_latipes_hsok
ENSDARG00000028517hbp110063.232ENSOMEG00000013045-9862.828Oryzias_melastigma
ENSDARG00000028517hbp19576.035ENSOMEG00000012837hbp19975.599Oryzias_melastigma
ENSDARG00000028517hbp110063.689ENSOGAG00000013102HBP110063.301Otolemur_garnettii
ENSDARG00000028517hbp110063.158ENSOARG00000005055HBP110062.928Ovis_aries
ENSDARG00000028517hbp110063.689ENSPPAG00000042116HBP19173.554Pan_paniscus
ENSDARG00000028517hbp110063.230ENSPPRG00000007240HBP110063.230Panthera_pardus
ENSDARG00000028517hbp110061.284ENSPTIG00000002734HBP110061.284Panthera_tigris_altaica
ENSDARG00000028517hbp110063.689ENSPTRG00000019575HBP19173.554Pan_troglodytes
ENSDARG00000028517hbp110063.883ENSPANG00000024385HBP19273.967Papio_anubis
ENSDARG00000028517hbp19975.306ENSPKIG00000016967hbp19875.918Paramormyrops_kingsleyae
ENSDARG00000028517hbp110065.560ENSPKIG00000016269HBP110065.253Paramormyrops_kingsleyae
ENSDARG00000028517hbp110065.184ENSPSIG00000012478HBP19464.151Pelodiscus_sinensis
ENSDARG00000028517hbp19558.079ENSPMGG00000008031-9458.079Periophthalmus_magnuspinnatus
ENSDARG00000028517hbp19875.789ENSPMGG00000005789hbp19974.473Periophthalmus_magnuspinnatus
ENSDARG00000028517hbp110062.984ENSPEMG00000014801Hbp110062.382Peromyscus_maniculatus_bairdii
ENSDARG00000028517hbp19351.496ENSPMAG00000002631hbp19749.799Petromyzon_marinus
ENSDARG00000028517hbp110063.443ENSPCIG00000004275HBP19162.453Phascolarctos_cinereus
ENSDARG00000028517hbp110062.851ENSPFOG00000012271-9762.500Poecilia_formosa
ENSDARG00000028517hbp19578.431ENSPFOG00000003951hbp19977.778Poecilia_formosa
ENSDARG00000028517hbp19564.783ENSPLAG00000012669-9964.783Poecilia_latipinna
ENSDARG00000028517hbp19578.431ENSPLAG00000003142hbp19977.778Poecilia_latipinna
ENSDARG00000028517hbp19578.431ENSPMEG00000003800hbp19977.778Poecilia_mexicana
ENSDARG00000028517hbp110062.851ENSPMEG00000015095-9962.851Poecilia_mexicana
ENSDARG00000028517hbp16068.750ENSPREG00000015242-8468.750Poecilia_reticulata
ENSDARG00000028517hbp19578.214ENSPREG00000004000hbp19977.560Poecilia_reticulata
ENSDARG00000028517hbp110063.689ENSPPYG00000017898HBP19963.068Pongo_abelii
ENSDARG00000028517hbp19962.598ENSPCAG00000014060HBP110062.130Procavia_capensis
ENSDARG00000028517hbp18770.157ENSPCOG00000015370HBP19969.634Propithecus_coquereli
ENSDARG00000028517hbp110063.424ENSPVAG00000014543HBP110063.035Pteropus_vampyrus
ENSDARG00000028517hbp110062.427ENSPNYG00000015063HBP110062.035Pundamilia_nyererei
ENSDARG00000028517hbp19776.759ENSPNYG00000001079hbp19776.333Pundamilia_nyererei
ENSDARG00000028517hbp110085.102ENSPNAG00000029977hbp110084.891Pygocentrus_nattereri
ENSDARG00000028517hbp110062.913ENSRNOG00000008927Hbp110062.500Rattus_norvegicus
ENSDARG00000028517hbp110054.990ENSRBIG00000042410HBP110054.813Rhinopithecus_bieti
ENSDARG00000028517hbp110063.689ENSRROG00000036622HBP19273.554Rhinopithecus_roxellana
ENSDARG00000028517hbp110063.495ENSSBOG00000023603HBP18975.214Saimiri_boliviensis_boliviensis
ENSDARG00000028517hbp110063.443ENSSHAG00000010948HBP19862.813Sarcophilus_harrisii
ENSDARG00000028517hbp110076.494ENSSFOG00015011155hbp110075.649Scleropages_formosus
ENSDARG00000028517hbp19577.874ENSSMAG00000009892hbp110075.870Scophthalmus_maximus
ENSDARG00000028517hbp110059.491ENSSMAG00000012631-9459.687Scophthalmus_maximus
ENSDARG00000028517hbp110061.133ENSSDUG00000015387-9760.542Seriola_dumerili
ENSDARG00000028517hbp19577.609ENSSDUG00000022273hbp110077.174Seriola_dumerili
ENSDARG00000028517hbp19563.694ENSSLDG00000017324-9964.331Seriola_lalandi_dorsalis
ENSDARG00000028517hbp19577.609ENSSLDG00000009669hbp110077.174Seriola_lalandi_dorsalis
ENSDARG00000028517hbp18960.521ENSSARG00000007731HBP110060.087Sorex_araneus
ENSDARG00000028517hbp110064.603ENSSPUG00000019157HBP19562.934Sphenodon_punctatus
ENSDARG00000028517hbp19579.176ENSSPAG00000004739hbp19977.342Stegastes_partitus
ENSDARG00000028517hbp110061.660ENSSPAG00000009193-9961.660Stegastes_partitus
ENSDARG00000028517hbp110064.008ENSSSCG00000035673HBP110064.008Sus_scrofa
ENSDARG00000028517hbp110064.093ENSTGUG00000003100HBP110063.514Taeniopygia_guttata
ENSDARG00000028517hbp19577.778ENSTRUG00000016990hbp19975.764Takifugu_rubripes
ENSDARG00000028517hbp19554.274ENSTRUG00000011881-7954.526Takifugu_rubripes
ENSDARG00000028517hbp19455.441ENSTNIG00000002023-9354.583Tetraodon_nigroviridis
ENSDARG00000028517hbp19577.124ENSTNIG00000016027hbp19975.109Tetraodon_nigroviridis
ENSDARG00000028517hbp110055.599ENSTBEG00000007793HBP110055.206Tupaia_belangeri
ENSDARG00000028517hbp110064.217ENSTTRG00000006826HBP110064.202Tursiops_truncatus
ENSDARG00000028517hbp110063.938ENSUAMG00000005951HBP110063.688Ursus_americanus
ENSDARG00000028517hbp110063.743ENSUMAG00000018257HBP110063.498Ursus_maritimus
ENSDARG00000028517hbp17663.517ENSVPAG00000008629HBP19363.517Vicugna_pacos
ENSDARG00000028517hbp110063.938ENSVVUG00000022009HBP110063.688Vulpes_vulpes
ENSDARG00000028517hbp110061.702ENSXETG00000005922hbp110060.755Xenopus_tropicalis
ENSDARG00000028517hbp19974.795ENSXCOG00000020795hbp19774.180Xiphophorus_couchianus
ENSDARG00000028517hbp19577.778ENSXMAG00000016455hbp19977.124Xiphophorus_maculatus
ENSDARG00000028517hbp110061.895ENSXMAG00000007586-9961.895Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003677DNA binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0006355regulation of transcription, DNA-templated-IEAProcess

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us