EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000029445 (Gene tree)
Gene ID: 393273
Gene Symbol: zgc:56676
Alias: -
Full Name: zgc:56676
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 4741 bases
Position: chr24:32517915-32522655
Accession: ZDB-GENE-040426-1109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000048967	SUI1	PF01253.22	1.4e-28	1	1
ENSDARP00000120624	SUI1	PF01253.22	1.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143781	-	896	XM_005162855	ENSDARP00000120624	113 (aa)	XP_005162912	Q7ZW93
ENSDART00000048968	-	784	-	ENSDARP00000048967	113 (aa)	-	Q7ZW93

Gene Model

Click here to download ENSDARG00000029445's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000029445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000029445	zgc:56676	100	92.035	ENSDARG00000012688	eif1b	100	92.035

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000029445	zgc:56676	100	96.460	ENSG00000114784	EIF1B	100	96.460	Homo_sapiens
ENSDARG00000029445	zgc:56676	100	96.460	ENSAMEG00000001679	EIF1B	100	96.460	Ailuropoda_melanoleuca
ENSDARG00000029445	zgc:56676	100	61.947	ENSACIG00000009618	zgc:56676	100	53.982	Amphilophus_citrinellus
ENSDARG00000029445	zgc:56676	100	96.491	ENSAPLG00000001143	EIF1B	100	96.491	Anas_platyrhynchos
ENSDARG00000029445	zgc:56676	91	97.087	ENSACAG00000017884	EIF1B	95	97.087	Anolis_carolinensis
ENSDARG00000029445	zgc:56676	100	96.460	ENSANAG00000026979	EIF1B	100	96.460	Aotus_nancymaae
ENSDARG00000029445	zgc:56676	100	98.230	ENSAMXG00000033877	zgc:56676	100	98.230	Astyanax_mexicanus
ENSDARG00000029445	zgc:56676	100	96.460	ENSBTAG00000019106	EIF1B	100	96.460	Bos_taurus
ENSDARG00000029445	zgc:56676	77	59.783	WBGene00020868	eif-1	75	63.415	Caenorhabditis_elegans
ENSDARG00000029445	zgc:56676	100	96.460	ENSCJAG00000046513	EIF1B	100	96.460	Callithrix_jacchus
ENSDARG00000029445	zgc:56676	60	88.235	ENSCAFG00000029183	EIF1B	80	96.364	Canis_familiaris
ENSDARG00000029445	zgc:56676	100	96.460	ENSCAFG00020025518	EIF1B	100	96.460	Canis_lupus_dingo
ENSDARG00000029445	zgc:56676	58	96.923	ENSCHIG00000022430	EIF1B	79	96.923	Capra_hircus
ENSDARG00000029445	zgc:56676	100	96.460	ENSTSYG00000006338	EIF1B	100	96.460	Carlito_syrichta
ENSDARG00000029445	zgc:56676	100	96.460	ENSCPOG00000035400	EIF1B	100	96.460	Cavia_porcellus
ENSDARG00000029445	zgc:56676	100	96.460	ENSCCAG00000031083	EIF1B	100	96.460	Cebus_capucinus
ENSDARG00000029445	zgc:56676	100	96.460	ENSCATG00000016704	EIF1B	100	96.460	Cercocebus_atys
ENSDARG00000029445	zgc:56676	90	97.059	ENSCLAG00000016040	EIF1B	100	97.059	Chinchilla_lanigera
ENSDARG00000029445	zgc:56676	100	96.460	ENSCSAG00000016916	EIF1B	100	96.460	Chlorocebus_sabaeus
ENSDARG00000029445	zgc:56676	90	95.098	ENSCHOG00000009555	EIF1B	100	95.098	Choloepus_hoffmanni
ENSDARG00000029445	zgc:56676	100	96.460	ENSCPBG00000000106	EIF1B	100	96.460	Chrysemys_picta_bellii
ENSDARG00000029445	zgc:56676	100	96.460	ENSCANG00000043425	EIF1B	100	96.460	Colobus_angolensis_palliatus
ENSDARG00000029445	zgc:56676	100	96.460	ENSCGRG00001004908	Eif1b	100	96.460	Cricetulus_griseus_chok1gshd
ENSDARG00000029445	zgc:56676	90	97.059	ENSCGRG00000013833	Eif1b	100	97.059	Cricetulus_griseus_crigri
ENSDARG00000029445	zgc:56676	91	97.087	ENSDORG00000025252	Eif1b	100	97.087	Dipodomys_ordii
ENSDARG00000029445	zgc:56676	100	96.460	ENSETEG00000017295	EIF1B	100	96.460	Echinops_telfairi
ENSDARG00000029445	zgc:56676	100	96.460	ENSEASG00005007609	EIF1B	100	96.460	Equus_asinus_asinus
ENSDARG00000029445	zgc:56676	100	96.460	ENSECAG00000005758	EIF1B	100	96.460	Equus_caballus
ENSDARG00000029445	zgc:56676	100	93.805	ENSELUG00000002720	zgc:56676	100	93.805	Esox_lucius
ENSDARG00000029445	zgc:56676	100	96.460	ENSFCAG00000003255	EIF1B	100	96.460	Felis_catus
ENSDARG00000029445	zgc:56676	90	98.039	ENSFALG00000012290	EIF1B	91	98.039	Ficedula_albicollis
ENSDARG00000029445	zgc:56676	100	96.460	ENSFDAG00000007219	EIF1B	100	96.460	Fukomys_damarensis
ENSDARG00000029445	zgc:56676	100	90.265	ENSGMOG00000009623	-	100	90.265	Gadus_morhua
ENSDARG00000029445	zgc:56676	100	97.345	ENSGALG00000038646	EIF1B	100	97.345	Gallus_gallus
ENSDARG00000029445	zgc:56676	100	96.460	ENSGAGG00000011376	EIF1B	100	96.460	Gopherus_agassizii
ENSDARG00000029445	zgc:56676	100	96.460	ENSGGOG00000008312	EIF1B	100	96.460	Gorilla_gorilla
ENSDARG00000029445	zgc:56676	100	96.460	ENSHGLG00100006444	EIF1B	100	96.460	Heterocephalus_glaber_male
ENSDARG00000029445	zgc:56676	98	73.874	ENSIPUG00000012511	-	98	73.874	Ictalurus_punctatus
ENSDARG00000029445	zgc:56676	100	96.460	ENSSTOG00000012168	EIF1B	100	96.460	Ictidomys_tridecemlineatus
ENSDARG00000029445	zgc:56676	90	95.098	ENSJJAG00000020423	Eif1b	100	95.098	Jaculus_jaculus
ENSDARG00000029445	zgc:56676	94	84.906	ENSLACG00000022678	zgc:56676	97	84.906	Latimeria_chalumnae
ENSDARG00000029445	zgc:56676	100	92.920	ENSLACG00000004014	-	100	92.920	Latimeria_chalumnae
ENSDARG00000029445	zgc:56676	100	93.805	ENSLOCG00000012941	EIF1B	89	93.805	Lepisosteus_oculatus
ENSDARG00000029445	zgc:56676	100	96.460	ENSLAFG00000001140	EIF1B	100	96.460	Loxodonta_africana
ENSDARG00000029445	zgc:56676	100	96.460	ENSMFAG00000037264	EIF1B	100	96.460	Macaca_fascicularis
ENSDARG00000029445	zgc:56676	100	96.460	ENSMMUG00000040036	EIF1B	100	96.460	Macaca_mulatta
ENSDARG00000029445	zgc:56676	100	96.460	ENSMNEG00000032776	EIF1B	100	96.460	Macaca_nemestrina
ENSDARG00000029445	zgc:56676	100	96.460	ENSMLEG00000033348	EIF1B	100	96.460	Mandrillus_leucophaeus
ENSDARG00000029445	zgc:56676	100	97.345	ENSMGAG00000011733	EIF1B	100	97.345	Meleagris_gallopavo
ENSDARG00000029445	zgc:56676	100	96.460	ENSMAUG00000016815	Eif1b	100	96.460	Mesocricetus_auratus
ENSDARG00000029445	zgc:56676	100	96.460	ENSMICG00000049308	EIF1B	100	96.460	Microcebus_murinus
ENSDARG00000029445	zgc:56676	100	96.460	ENSMOCG00000000649	-	100	96.460	Microtus_ochrogaster
ENSDARG00000029445	zgc:56676	100	94.737	ENSMOCG00000017712	-	100	92.105	Microtus_ochrogaster
ENSDARG00000029445	zgc:56676	100	69.027	ENSMODG00000002449	-	100	69.027	Monodelphis_domestica
ENSDARG00000029445	zgc:56676	100	96.460	ENSMODG00000011056	EIF1B	100	96.460	Monodelphis_domestica
ENSDARG00000029445	zgc:56676	100	96.460	MGP_CAROLIEiJ_G0032817	Eif1b	100	96.460	Mus_caroli
ENSDARG00000029445	zgc:56676	100	96.460	ENSMUSG00000006941	Eif1b	100	97.000	Mus_musculus
ENSDARG00000029445	zgc:56676	100	96.460	MGP_PahariEiJ_G0015684	Eif1b	100	96.460	Mus_pahari
ENSDARG00000029445	zgc:56676	100	96.460	MGP_SPRETEiJ_G0033965	Eif1b	100	96.460	Mus_spretus
ENSDARG00000029445	zgc:56676	100	96.460	ENSMPUG00000017958	EIF1B	100	96.460	Mustela_putorius_furo
ENSDARG00000029445	zgc:56676	100	96.460	ENSMLUG00000014425	EIF1B	100	96.460	Myotis_lucifugus
ENSDARG00000029445	zgc:56676	100	96.460	ENSNGAG00000006534	Eif1b	100	96.460	Nannospalax_galili
ENSDARG00000029445	zgc:56676	100	96.460	ENSNLEG00000005660	EIF1B	100	96.460	Nomascus_leucogenys
ENSDARG00000029445	zgc:56676	57	93.750	ENSMEUG00000007908	-	85	92.727	Notamacropus_eugenii
ENSDARG00000029445	zgc:56676	100	94.690	ENSMEUG00000005336	-	100	94.690	Notamacropus_eugenii
ENSDARG00000029445	zgc:56676	100	82.456	ENSOPRG00000001569	EIF1B	100	82.456	Ochotona_princeps
ENSDARG00000029445	zgc:56676	100	96.460	ENSODEG00000010883	EIF1B	100	96.460	Octodon_degus
ENSDARG00000029445	zgc:56676	91	97.087	ENSOANG00000003583	EIF1B	90	97.087	Ornithorhynchus_anatinus
ENSDARG00000029445	zgc:56676	100	96.460	ENSOGAG00000025224	EIF1B	100	96.460	Otolemur_garnettii
ENSDARG00000029445	zgc:56676	100	96.460	ENSOARG00000002622	EIF1B	100	96.460	Ovis_aries
ENSDARG00000029445	zgc:56676	100	96.460	ENSPPAG00000028080	EIF1B	100	96.460	Pan_paniscus
ENSDARG00000029445	zgc:56676	100	95.575	ENSPPRG00000003963	EIF1B	100	95.575	Panthera_pardus
ENSDARG00000029445	zgc:56676	90	97.059	ENSPTIG00000013646	EIF1B	90	97.059	Panthera_tigris_altaica
ENSDARG00000029445	zgc:56676	100	96.460	ENSPTRG00000014776	EIF1B	100	96.460	Pan_troglodytes
ENSDARG00000029445	zgc:56676	100	96.460	ENSPANG00000033825	EIF1B	100	96.460	Papio_anubis
ENSDARG00000029445	zgc:56676	100	95.575	ENSPKIG00000004040	zgc:56676	100	95.575	Paramormyrops_kingsleyae
ENSDARG00000029445	zgc:56676	91	98.058	ENSPSIG00000002437	EIF1B	99	98.058	Pelodiscus_sinensis
ENSDARG00000029445	zgc:56676	100	76.991	ENSPMGG00000006863	zgc:56676	100	76.991	Periophthalmus_magnuspinnatus
ENSDARG00000029445	zgc:56676	100	76.991	ENSPEMG00000016270	-	97	71.681	Peromyscus_maniculatus_bairdii
ENSDARG00000029445	zgc:56676	100	96.460	ENSPCIG00000016375	EIF1B	100	96.460	Phascolarctos_cinereus
ENSDARG00000029445	zgc:56676	100	95.575	ENSPPYG00000025897	EIF1B	100	95.575	Pongo_abelii
ENSDARG00000029445	zgc:56676	92	96.154	ENSPCAG00000015629	EIF1B	100	96.154	Procavia_capensis
ENSDARG00000029445	zgc:56676	100	96.460	ENSPCOG00000020355	EIF1B	100	96.460	Propithecus_coquereli
ENSDARG00000029445	zgc:56676	100	96.460	ENSPVAG00000013911	EIF1B	100	96.460	Pteropus_vampyrus
ENSDARG00000029445	zgc:56676	100	98.230	ENSPNAG00000023915	zgc:56676	100	98.230	Pygocentrus_nattereri
ENSDARG00000029445	zgc:56676	100	96.460	ENSRNOG00000018848	Eif1b	100	96.460	Rattus_norvegicus
ENSDARG00000029445	zgc:56676	100	96.460	ENSRBIG00000006994	EIF1B	100	96.460	Rhinopithecus_bieti
ENSDARG00000029445	zgc:56676	100	96.460	ENSRROG00000040263	EIF1B	100	96.460	Rhinopithecus_roxellana
ENSDARG00000029445	zgc:56676	91	97.087	ENSSBOG00000023951	EIF1B	77	97.087	Saimiri_boliviensis_boliviensis
ENSDARG00000029445	zgc:56676	100	72.566	ENSSHAG00000012996	-	100	69.912	Sarcophilus_harrisii
ENSDARG00000029445	zgc:56676	93	96.190	ENSSHAG00000013510	-	93	96.190	Sarcophilus_harrisii
ENSDARG00000029445	zgc:56676	100	95.575	ENSSFOG00015007208	zgc:56676	100	95.575	Scleropages_formosus
ENSDARG00000029445	zgc:56676	100	95.575	ENSSPUG00000002378	EIF1B	100	95.575	Sphenodon_punctatus
ENSDARG00000029445	zgc:56676	100	96.460	ENSSSCG00000011270	EIF1B	100	96.460	Sus_scrofa
ENSDARG00000029445	zgc:56676	100	96.460	ENSTGUG00000004677	EIF1B	97	96.460	Taeniopygia_guttata
ENSDARG00000029445	zgc:56676	100	94.690	ENSTBEG00000013185	EIF1B	100	94.690	Tupaia_belangeri
ENSDARG00000029445	zgc:56676	100	96.460	ENSTTRG00000000163	EIF1B	100	96.460	Tursiops_truncatus
ENSDARG00000029445	zgc:56676	89	96.040	ENSUAMG00000022317	EIF1B	93	96.040	Ursus_americanus
ENSDARG00000029445	zgc:56676	90	97.059	ENSUMAG00000004559	EIF1B	85	97.059	Ursus_maritimus
ENSDARG00000029445	zgc:56676	100	96.460	ENSVPAG00000000967	EIF1B	100	96.460	Vicugna_pacos
ENSDARG00000029445	zgc:56676	100	96.460	ENSVVUG00000005565	EIF1B	100	96.460	Vulpes_vulpes
ENSDARG00000029445	zgc:56676	100	95.575	ENSXETG00000000359	eif1b	100	95.575	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0006413	translational initiation	-	IEA	Process
GO:0016282	eukaryotic 43S preinitiation complex	21873635.	IBA	Component
GO:0043024	ribosomal small subunit binding	21873635.	IBA	Function