EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000029612 (Gene tree)
Gene ID: 368735
Gene Symbol: gpkow
Alias: mp:zf637-1-001655|si:dz150f13.5|t54l|wu:fb38d03|zf637-1-001655|zgc:152714
Full Name: G patch domain and KOW motifs
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 26283 bases
Position: chr8:36591791-36618073
Accession: ZDB-GENE-030616-159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000047911	KOW	PF00467.29	2.2e-12	1	1
ENSDARP00000047911	G-patch	PF01585.23	9.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000047912	-	1997	-	ENSDARP00000047911	506 (aa)	-	B0R0V3

Gene Model

Click here to download ENSDARG00000029612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000029612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000029612	gpkow	95	45.808	ENSG00000068394	GPKOW	96	45.808	Homo_sapiens
ENSDARG00000029612	gpkow	96	69.277	ENSAPOG00000004970	gpkow	96	69.277	Acanthochromis_polyacanthus
ENSDARG00000029612	gpkow	97	46.215	ENSAMEG00000012303	GPKOW	98	46.215	Ailuropoda_melanoleuca
ENSDARG00000029612	gpkow	96	66.733	ENSACIG00000010755	gpkow	96	68.725	Amphilophus_citrinellus
ENSDARG00000029612	gpkow	97	70.140	ENSAOCG00000022818	gpkow	95	70.140	Amphiprion_ocellaris
ENSDARG00000029612	gpkow	97	69.522	ENSAPEG00000021416	gpkow	97	69.920	Amphiprion_percula
ENSDARG00000029612	gpkow	97	69.094	ENSATEG00000023744	gpkow	97	69.352	Anabas_testudineus
ENSDARG00000029612	gpkow	95	58.537	ENSACAG00000016598	GPKOW	95	58.537	Anolis_carolinensis
ENSDARG00000029612	gpkow	95	41.498	ENSANAG00000033498	-	96	41.498	Aotus_nancymaae
ENSDARG00000029612	gpkow	81	47.356	ENSANAG00000036571	-	95	47.573	Aotus_nancymaae
ENSDARG00000029612	gpkow	95	47.166	ENSANAG00000030473	-	96	47.166	Aotus_nancymaae
ENSDARG00000029612	gpkow	62	67.619	ENSAMXG00000039266	gpkow	95	67.619	Astyanax_mexicanus
ENSDARG00000029612	gpkow	96	46.076	ENSBTAG00000002568	GPKOW	97	46.076	Bos_taurus
ENSDARG00000029612	gpkow	95	45.547	ENSCJAG00000002656	GPKOW	96	45.547	Callithrix_jacchus
ENSDARG00000029612	gpkow	96	45.749	ENSCAFG00000015794	GPKOW	97	45.749	Canis_familiaris
ENSDARG00000029612	gpkow	96	45.749	ENSCAFG00020020258	GPKOW	97	45.749	Canis_lupus_dingo
ENSDARG00000029612	gpkow	95	46.926	ENSCHIG00000013277	GPKOW	97	46.926	Capra_hircus
ENSDARG00000029612	gpkow	96	44.444	ENSTSYG00000033182	-	97	44.444	Carlito_syrichta
ENSDARG00000029612	gpkow	95	41.057	ENSTSYG00000029374	-	96	41.057	Carlito_syrichta
ENSDARG00000029612	gpkow	78	47.015	ENSCAPG00000011329	GPKOW	99	47.015	Cavia_aperea
ENSDARG00000029612	gpkow	95	46.169	ENSCPOG00000013270	GPKOW	96	46.169	Cavia_porcellus
ENSDARG00000029612	gpkow	95	45.639	ENSCCAG00000034660	-	96	45.639	Cebus_capucinus
ENSDARG00000029612	gpkow	95	43.265	ENSCCAG00000022161	-	96	43.265	Cebus_capucinus
ENSDARG00000029612	gpkow	95	46.761	ENSCATG00000041433	GPKOW	96	46.761	Cercocebus_atys
ENSDARG00000029612	gpkow	95	41.870	ENSCLAG00000007117	-	91	41.870	Chinchilla_lanigera
ENSDARG00000029612	gpkow	95	45.102	ENSCLAG00000002220	-	96	45.102	Chinchilla_lanigera
ENSDARG00000029612	gpkow	95	46.881	ENSCSAG00000012926	GPKOW	96	46.881	Chlorocebus_sabaeus
ENSDARG00000029612	gpkow	94	58.197	ENSCPBG00000016609	GPKOW	97	57.884	Chrysemys_picta_bellii
ENSDARG00000029612	gpkow	66	37.151	ENSCING00000020813	-	93	37.079	Ciona_intestinalis
ENSDARG00000029612	gpkow	95	46.356	ENSCANG00000037595	GPKOW	96	46.356	Colobus_angolensis_palliatus
ENSDARG00000029612	gpkow	95	44.877	ENSCGRG00001016210	Gpkow	96	44.877	Cricetulus_griseus_chok1gshd
ENSDARG00000029612	gpkow	95	44.877	ENSCGRG00000013835	Gpkow	96	44.877	Cricetulus_griseus_crigri
ENSDARG00000029612	gpkow	98	65.234	ENSCSEG00000020569	gpkow	99	66.406	Cynoglossus_semilaevis
ENSDARG00000029612	gpkow	100	66.148	ENSCVAG00000017066	gpkow	100	66.148	Cyprinodon_variegatus
ENSDARG00000029612	gpkow	96	45.473	ENSDNOG00000016647	GPKOW	99	45.916	Dasypus_novemcinctus
ENSDARG00000029612	gpkow	95	41.212	ENSDORG00000013663	Gpkow	96	41.212	Dipodomys_ordii
ENSDARG00000029612	gpkow	73	48.691	ENSEBUG00000001912	gpkow	86	48.691	Eptatretus_burgeri
ENSDARG00000029612	gpkow	95	43.687	ENSEASG00005019852	GPKOW	96	43.687	Equus_asinus_asinus
ENSDARG00000029612	gpkow	96	45.951	ENSECAG00000018251	GPKOW	97	45.951	Equus_caballus
ENSDARG00000029612	gpkow	95	42.536	ENSEEUG00000008839	GPKOW	96	42.536	Erinaceus_europaeus
ENSDARG00000029612	gpkow	96	70.717	ENSELUG00000022223	gpkow	96	70.717	Esox_lucius
ENSDARG00000029612	gpkow	96	45.344	ENSFCAG00000003818	GPKOW	97	45.344	Felis_catus
ENSDARG00000029612	gpkow	95	45.306	ENSFDAG00000001669	GPKOW	96	45.306	Fukomys_damarensis
ENSDARG00000029612	gpkow	97	68.273	ENSFHEG00000022349	gpkow	95	68.273	Fundulus_heteroclitus
ENSDARG00000029612	gpkow	97	64.516	ENSGMOG00000019661	gpkow	97	64.516	Gadus_morhua
ENSDARG00000029612	gpkow	96	66.531	ENSGACG00000012127	gpkow	96	66.937	Gasterosteus_aculeatus
ENSDARG00000029612	gpkow	86	50.452	ENSGAGG00000006302	GPKOW	99	50.905	Gopherus_agassizii
ENSDARG00000029612	gpkow	95	45.306	ENSGGOG00000013685	GPKOW	96	45.306	Gorilla_gorilla
ENSDARG00000029612	gpkow	96	68.862	ENSHBUG00000010655	gpkow	89	69.000	Haplochromis_burtoni
ENSDARG00000029612	gpkow	95	45.621	ENSHGLG00000002746	GPKOW	96	45.621	Heterocephalus_glaber_female
ENSDARG00000029612	gpkow	95	46.029	ENSHGLG00100014283	GPKOW	96	46.029	Heterocephalus_glaber_male
ENSDARG00000029612	gpkow	99	70.825	ENSIPUG00000008342	gpkow	99	70.962	Ictalurus_punctatus
ENSDARG00000029612	gpkow	95	45.194	ENSSTOG00000014593	GPKOW	96	45.194	Ictidomys_tridecemlineatus
ENSDARG00000029612	gpkow	95	43.574	ENSJJAG00000013397	Gpkow	96	43.574	Jaculus_jaculus
ENSDARG00000029612	gpkow	96	66.733	ENSKMAG00000006241	gpkow	97	66.733	Kryptolebias_marmoratus
ENSDARG00000029612	gpkow	97	68.317	ENSLBEG00000013238	gpkow	97	69.246	Labrus_bergylta
ENSDARG00000029612	gpkow	58	60.000	ENSLACG00000003399	gpkow	100	60.339	Latimeria_chalumnae
ENSDARG00000029612	gpkow	95	66.265	ENSLOCG00000014776	gpkow	94	66.265	Lepisosteus_oculatus
ENSDARG00000029612	gpkow	95	46.843	ENSLAFG00000005896	GPKOW	96	46.843	Loxodonta_africana
ENSDARG00000029612	gpkow	95	47.059	ENSMFAG00000035346	GPKOW	96	47.059	Macaca_fascicularis
ENSDARG00000029612	gpkow	95	47.059	ENSMMUG00000020557	GPKOW	92	47.059	Macaca_mulatta
ENSDARG00000029612	gpkow	95	47.059	ENSMNEG00000004803	GPKOW	96	47.059	Macaca_nemestrina
ENSDARG00000029612	gpkow	95	46.559	ENSMLEG00000033293	GPKOW	96	46.559	Mandrillus_leucophaeus
ENSDARG00000029612	gpkow	97	69.556	ENSMAMG00000024235	gpkow	97	69.556	Mastacembelus_armatus
ENSDARG00000029612	gpkow	96	68.862	ENSMZEG00005026357	gpkow	89	69.000	Maylandia_zebra
ENSDARG00000029612	gpkow	95	44.715	ENSMICG00000045083	GPKOW	96	44.715	Microcebus_murinus
ENSDARG00000029612	gpkow	95	45.102	ENSMOCG00000019251	Gpkow	97	45.102	Microtus_ochrogaster
ENSDARG00000029612	gpkow	94	40.568	ENSMODG00000023705	-	94	41.785	Monodelphis_domestica
ENSDARG00000029612	gpkow	90	41.794	ENSMODG00000011443	-	99	42.670	Monodelphis_domestica
ENSDARG00000029612	gpkow	99	64.032	ENSMALG00000015148	gpkow	99	64.427	Monopterus_albus
ENSDARG00000029612	gpkow	82	43.662	MGP_CAROLIEiJ_G0032893	Gpkow	96	42.703	Mus_caroli
ENSDARG00000029612	gpkow	94	44.082	ENSMUSG00000031148	Gpkow	96	44.309	Mus_musculus
ENSDARG00000029612	gpkow	94	45.102	MGP_PahariEiJ_G0031441	Gpkow	97	45.436	Mus_pahari
ENSDARG00000029612	gpkow	95	46.436	ENSMPUG00000013808	GPKOW	97	46.436	Mustela_putorius_furo
ENSDARG00000029612	gpkow	59	41.214	ENSMLUG00000009281	-	97	41.083	Myotis_lucifugus
ENSDARG00000029612	gpkow	95	44.082	ENSNGAG00000005382	Gpkow	96	44.082	Nannospalax_galili
ENSDARG00000029612	gpkow	96	68.862	ENSNBRG00000008941	gpkow	96	69.000	Neolamprologus_brichardi
ENSDARG00000029612	gpkow	95	46.559	ENSNLEG00000007998	GPKOW	96	46.559	Nomascus_leucogenys
ENSDARG00000029612	gpkow	67	42.183	ENSOPRG00000016412	-	67	42.183	Ochotona_princeps
ENSDARG00000029612	gpkow	96	69.261	ENSONIG00000016834	gpkow	89	69.400	Oreochromis_niloticus
ENSDARG00000029612	gpkow	95	39.839	ENSOCUG00000010422	GPKOW	96	40.080	Oryctolagus_cuniculus
ENSDARG00000029612	gpkow	96	67.134	ENSORLG00000014442	gpkow	97	67.928	Oryzias_latipes
ENSDARG00000029612	gpkow	96	67.465	ENSORLG00020012795	gpkow	97	67.928	Oryzias_latipes_hni
ENSDARG00000029612	gpkow	96	67.134	ENSORLG00015006852	gpkow	97	67.928	Oryzias_latipes_hsok
ENSDARG00000029612	gpkow	96	68.600	ENSOMEG00000003236	gpkow	97	70.000	Oryzias_melastigma
ENSDARG00000029612	gpkow	95	41.165	ENSOGAG00000003644	GPKOW	96	41.165	Otolemur_garnettii
ENSDARG00000029612	gpkow	95	46.721	ENSOARG00000010927	GPKOW	97	46.721	Ovis_aries
ENSDARG00000029612	gpkow	95	45.732	ENSPPAG00000040116	GPKOW	96	45.732	Pan_paniscus
ENSDARG00000029612	gpkow	96	44.737	ENSPPRG00000016972	GPKOW	97	44.737	Panthera_pardus
ENSDARG00000029612	gpkow	96	45.233	ENSPTIG00000008398	GPKOW	97	45.233	Panthera_tigris_altaica
ENSDARG00000029612	gpkow	95	45.808	ENSPTRG00000047603	GPKOW	96	45.808	Pan_troglodytes
ENSDARG00000029612	gpkow	95	46.356	ENSPANG00000013477	GPKOW	96	46.356	Papio_anubis
ENSDARG00000029612	gpkow	96	67.006	ENSPKIG00000008382	gpkow	95	66.599	Paramormyrops_kingsleyae
ENSDARG00000029612	gpkow	95	67.886	ENSPMGG00000010880	gpkow	95	67.886	Periophthalmus_magnuspinnatus
ENSDARG00000029612	gpkow	94	46.012	ENSPEMG00000009966	Gpkow	96	46.012	Peromyscus_maniculatus_bairdii
ENSDARG00000029612	gpkow	96	52.418	ENSPMAG00000003497	gpkow	97	53.592	Petromyzon_marinus
ENSDARG00000029612	gpkow	97	68.136	ENSPFOG00000003065	gpkow	95	68.136	Poecilia_formosa
ENSDARG00000029612	gpkow	97	67.928	ENSPLAG00000023097	gpkow	96	67.928	Poecilia_latipinna
ENSDARG00000029612	gpkow	97	68.537	ENSPMEG00000002762	gpkow	95	68.537	Poecilia_mexicana
ENSDARG00000029612	gpkow	64	74.154	ENSPREG00000002671	gpkow	100	74.154	Poecilia_reticulata
ENSDARG00000029612	gpkow	71	53.623	ENSPPYG00000020334	-	95	53.623	Pongo_abelii
ENSDARG00000029612	gpkow	94	45.492	ENSPCOG00000008505	GPKOW	96	45.492	Propithecus_coquereli
ENSDARG00000029612	gpkow	95	69.277	ENSPNYG00000014523	gpkow	96	68.876	Pundamilia_nyererei
ENSDARG00000029612	gpkow	100	73.764	ENSPNAG00000008360	gpkow	100	74.715	Pygocentrus_nattereri
ENSDARG00000029612	gpkow	94	44.969	ENSRNOG00000022939	Gpkow	97	45.102	Rattus_norvegicus
ENSDARG00000029612	gpkow	91	47.210	ENSRBIG00000027885	GPKOW	95	47.210	Rhinopithecus_bieti
ENSDARG00000029612	gpkow	95	46.247	ENSRROG00000037604	GPKOW	96	46.247	Rhinopithecus_roxellana
ENSDARG00000029612	gpkow	95	41.785	ENSSBOG00000024861	-	94	41.785	Saimiri_boliviensis_boliviensis
ENSDARG00000029612	gpkow	95	46.653	ENSSBOG00000032042	-	96	46.653	Saimiri_boliviensis_boliviensis
ENSDARG00000029612	gpkow	51	41.762	ENSSHAG00000004719	-	92	41.762	Sarcophilus_harrisii
ENSDARG00000029612	gpkow	98	68.307	ENSSFOG00015009901	gpkow	97	68.307	Scleropages_formosus
ENSDARG00000029612	gpkow	94	65.927	ENSSMAG00000013323	gpkow	95	66.263	Scophthalmus_maximus
ENSDARG00000029612	gpkow	95	70.459	ENSSDUG00000023134	gpkow	96	70.800	Seriola_dumerili
ENSDARG00000029612	gpkow	97	69.822	ENSSLDG00000024756	gpkow	98	70.158	Seriola_lalandi_dorsalis
ENSDARG00000029612	gpkow	88	45.638	ENSSARG00000003351	GPKOW	99	45.638	Sorex_araneus
ENSDARG00000029612	gpkow	96	69.014	ENSSPAG00000015503	gpkow	99	69.618	Stegastes_partitus
ENSDARG00000029612	gpkow	96	47.154	ENSSSCG00000012291	GPKOW	97	47.154	Sus_scrofa
ENSDARG00000029612	gpkow	95	62.500	ENSTRUG00000000616	gpkow	95	62.500	Takifugu_rubripes
ENSDARG00000029612	gpkow	95	62.702	ENSTNIG00000012502	gpkow	97	62.702	Tetraodon_nigroviridis
ENSDARG00000029612	gpkow	67	48.235	ENSTBEG00000004087	GPKOW	67	48.235	Tupaia_belangeri
ENSDARG00000029612	gpkow	96	46.107	ENSTTRG00000008579	GPKOW	97	46.107	Tursiops_truncatus
ENSDARG00000029612	gpkow	86	45.638	ENSUAMG00000026502	GPKOW	97	45.638	Ursus_americanus
ENSDARG00000029612	gpkow	84	45.882	ENSUMAG00000007072	GPKOW	80	45.882	Ursus_maritimus
ENSDARG00000029612	gpkow	96	46.154	ENSVVUG00000017815	GPKOW	97	46.154	Vulpes_vulpes
ENSDARG00000029612	gpkow	96	54.786	ENSXETG00000007727	gpkow	99	54.786	Xenopus_tropicalis
ENSDARG00000029612	gpkow	97	68.008	ENSXCOG00000014306	gpkow	99	67.255	Xiphophorus_couchianus
ENSDARG00000029612	gpkow	97	68.400	ENSXMAG00000018216	gpkow	95	68.400	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005681	spliceosomal complex	-	ISS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process