EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000029885 (Gene tree)
Gene ID
406674
Gene Symbol
rab41
Alias
wu:fi30c11|zgc:63637
Full Name
RAB41%2C member RAS oncogene family
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
16601 bases
Position
chr14:33280718-33297318
Accession
ZDB-GENE-040426-2686
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000069541MMR_HSR1PF01926.230.0001611
ENSDARP00000117395MMR_HSR1PF01926.230.000211
ENSDARP00000045554MMR_HSR1PF01926.230.0002111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000075056-2513XM_005173246ENSDARP00000069541211 (aa)XP_005173303Q4V957
ENSDART00000045555-2482-ENSDARP00000045554211 (aa)-A8KBS0
ENSDART00000138294-805XM_005173245ENSDARP00000117395211 (aa)XP_005173302E9QE54
Gene Model
Click here to download ENSDARG00000029885's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000029885's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000029885rab418733.880ENSDARG00000052954rab25b8733.880
ENSDARG00000029885rab419232.487ENSDARG00000058800rab25a9432.487
ENSDARG00000029885rab416940.411ENSDARG00000004151rab236640.506
ENSDARG00000029885rab419235.122ENSDARG00000103391rab9b9735.122
ENSDARG00000029885rab417340.909ENSDARG00000037967si:dkey-16l2.169536.000
ENSDARG00000029885rab417830.000ENSDARG00000070916dnajc276230.000
ENSDARG00000029885rab418442.938ENSDARG00000018602rab5aa8242.938
ENSDARG00000029885rab415730.328ENSDARG00000045074arl4d6130.328
ENSDARG00000029885rab417940.351ENSDARG00000098344rab18b8340.351
ENSDARG00000029885rab417333.548ENSDARG00000063321rabl26833.548
ENSDARG00000029885rab417543.671ENSDARG00000026484rab157543.671
ENSDARG00000029885rab419236.000ENSDARG00000020497rab7a9636.000
ENSDARG00000029885rab417538.125ENSDARG00000014058rab366138.125
ENSDARG00000029885rab417545.570ENSDARG00000034771rab137945.570
ENSDARG00000029885rab417540.506ENSDARG00000035188rab14l7340.506
ENSDARG00000029885rab419331.034ENSDARG00000006553rras9631.034
ENSDARG00000029885rab417433.544ENSDARG00000013161zgc:555588333.544
ENSDARG00000029885rab417736.970ENSDARG00000102580CU571310.17836.970
ENSDARG00000029885rab418041.808ENSDARG00000037884rab308841.808
ENSDARG00000029885rab419139.286ENSDARG00000029663rab1ab9639.286
ENSDARG00000029885rab417432.911ENSDARG00000010844kras8332.911
ENSDARG00000029885rab419237.000ENSDARG00000021287rab7b9637.000
ENSDARG00000029885rab418742.077ENSDARG00000007257rab5ab8542.077
ENSDARG00000029885rab417540.506ENSDARG00000074246rab147340.506
ENSDARG00000029885rab417438.365ENSDARG00000100379si:dkey-34d22.28638.365
ENSDARG00000029885rab418233.333ENSDARG00000046013rasl11a7433.333
ENSDARG00000029885rab419791.220ENSDARG00000034522rab6ba9991.220
ENSDARG00000029885rab417436.943ENSDARG00000090086rab11bb7236.943
ENSDARG00000029885rab416330.657ENSDARG00000099527nkiras17030.657
ENSDARG00000029885rab417544.937ENSDARG00000103934megf89144.937
ENSDARG00000029885rab416543.478ENSDARG00000018107rab3da8243.478
ENSDARG00000029885rab419237.500ENSDARG00000056479rab1bb9637.500
ENSDARG00000029885rab418431.285ENSDARG00000075285si:ch73-116o1.28531.285
ENSDARG00000029885rab419334.951ENSDARG00000034215rab42a9734.951
ENSDARG00000029885rab417436.943ENSDARG00000041450rab11a7336.943
ENSDARG00000029885rab417434.177ENSDARG00000005651hrasb10033.562
ENSDARG00000029885rab417931.361ENSDARG00000062865mras8230.263
ENSDARG00000029885rab419889.372ENSDARG00000103714rab6a9989.372
ENSDARG00000029885rab417438.690ENSDARG00000045027rab9a8238.690
ENSDARG00000029885rab418838.191ENSDARG00000052290rab33ba7938.191
ENSDARG00000029885rab418635.938ENSDARG00000010977rab34b8035.149
ENSDARG00000029885rab419237.436ENSDARG00000058044rab1ba9837.436
ENSDARG00000029885rab417340.385ENSDARG00000089428rab128636.318
ENSDARG00000029885rab417330.000ENSDARG00000062314rasl10a8230.588
ENSDARG00000029885rab419137.563ENSDARG00000020261rab2a9037.563
ENSDARG00000029885rab418430.899ENSDARG00000038225nras9330.899
ENSDARG00000029885rab417340.523ENSDARG00000102078CABZ01072548.17840.523
ENSDARG00000029885rab418239.106ENSDARG00000026098si:dkey-13a21.48639.106
ENSDARG00000029885rab419337.745ENSDARG00000057394rab33a8537.745
ENSDARG00000029885rab417441.509ENSDARG00000019312rab39ba7541.509
ENSDARG00000029885rab417433.544ENSDARG00000098497hrasa8333.544
ENSDARG00000029885rab418733.673ENSDARG00000041878rab11ba9232.990
ENSDARG00000029885rab417240.523ENSDARG00000003257zgc:1015596640.523
ENSDARG00000029885rab419789.268ENSDARG00000031343rab6bb9989.268
ENSDARG00000029885rab417341.558ENSDARG00000058425rab35b9136.957
ENSDARG00000029885rab418234.682ENSDARG00000036252rras28335.119
ENSDARG00000029885rab417441.509ENSDARG00000036501rab39bb7541.509
ENSDARG00000029885rab419237.056ENSDARG00000033056zgc:1719279337.056
ENSDARG00000029885rab418340.223ENSDARG00000055291rab18a8740.223
ENSDARG00000029885rab419236.318ENSDARG00000087243zgc:1009189636.318
ENSDARG00000029885rab419137.879ENSDARG00000114797rab3b8838.542
ENSDARG00000029885rab417436.943ENSDARG00000014340rab11al7336.943
ENSDARG00000029885rab419239.500ENSDARG00000052263rab1aa9639.500
ENSDARG00000029885rab419337.755ENSDARG00000015807rab22a9837.755
ENSDARG00000029885rab417539.752ENSDARG00000045628rab34a6739.752
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000029885rab4110088.152ENSG00000175582RAB6A9796.610Homo_sapiens
ENSDARG00000029885rab4110098.104ENSAPOG00000005731rab6a10098.104Acanthochromis_polyacanthus
ENSDARG00000029885rab419888.406ENSAMEG00000017285RAB6A8188.406Ailuropoda_melanoleuca
ENSDARG00000029885rab419888.889ENSACIG00000014605rab6a9988.889Amphilophus_citrinellus
ENSDARG00000029885rab419890.338ENSAOCG00000012277-9990.338Amphiprion_ocellaris
ENSDARG00000029885rab419889.855ENSATEG00000012459-9989.855Anabas_testudineus
ENSDARG00000029885rab4110098.104ENSATEG00000015992rab4110098.104Anabas_testudineus
ENSDARG00000029885rab419694.089ENSACAG00000015304-9694.175Anolis_carolinensis
ENSDARG00000029885rab419888.889ENSANAG00000036364RAB6A9988.889Aotus_nancymaae
ENSDARG00000029885rab4110098.104ENSACLG00000019423rab4110098.104Astatotilapia_calliptera
ENSDARG00000029885rab4110089.100ENSAMXG00000033216rab4110089.100Astyanax_mexicanus
ENSDARG00000029885rab4110089.100ENSAMXG00000032547rab6a10089.100Astyanax_mexicanus
ENSDARG00000029885rab419888.889ENSBTAG00000000025RAB6A9988.889Bos_taurus
ENSDARG00000029885rab419178.238WBGene00004269rab-6.19278.238Caenorhabditis_elegans
ENSDARG00000029885rab419888.889ENSCJAG00000039039RAB6A9988.889Callithrix_jacchus
ENSDARG00000029885rab419887.923ENSCAFG00000028870RAB6A9987.923Canis_familiaris
ENSDARG00000029885rab419888.889ENSCAFG00020002206RAB6A9988.889Canis_lupus_dingo
ENSDARG00000029885rab419888.889ENSCHIG00000023957RAB6A9988.889Capra_hircus
ENSDARG00000029885rab419888.406ENSTSYG00000013951RAB6A9988.406Carlito_syrichta
ENSDARG00000029885rab419888.889ENSCATG00000012428RAB6A9988.889Cercocebus_atys
ENSDARG00000029885rab419889.372ENSCLAG00000015536RAB6A9989.372Chinchilla_lanigera
ENSDARG00000029885rab419888.889ENSCSAG00000004062RAB6A9988.889Chlorocebus_sabaeus
ENSDARG00000029885rab419878.261ENSCHOG00000000992RAB6A9978.261Choloepus_hoffmanni
ENSDARG00000029885rab419790.244ENSCPBG00000000041RAB6A9990.244Chrysemys_picta_bellii
ENSDARG00000029885rab419684.466ENSCING00000002960-9984.466Ciona_intestinalis
ENSDARG00000029885rab419684.466ENSCSAVG00000009128-9984.466Ciona_savignyi
ENSDARG00000029885rab419888.889ENSCANG00000029094RAB6A9988.889Colobus_angolensis_palliatus
ENSDARG00000029885rab419888.889ENSCGRG00001018153Rab6a9988.889Cricetulus_griseus_chok1gshd
ENSDARG00000029885rab4110097.156ENSCSEG00000004941rab4110097.156Cynoglossus_semilaevis
ENSDARG00000029885rab419889.855ENSCVAG00000022249rab6a9989.855Cyprinodon_variegatus
ENSDARG00000029885rab4110096.682ENSCVAG00000001618rab4110096.682Cyprinodon_variegatus
ENSDARG00000029885rab419888.889ENSDNOG00000042746RAB6A9988.889Dasypus_novemcinctus
ENSDARG00000029885rab419889.372ENSDORG00000027784Rab6a9989.372Dipodomys_ordii
ENSDARG00000029885rab419785.854FBgn0015797Rab69985.854Drosophila_melanogaster
ENSDARG00000029885rab419868.116ENSETEG00000009412-9968.116Echinops_telfairi
ENSDARG00000029885rab419888.889ENSEASG00005017944RAB6A9988.889Equus_asinus_asinus
ENSDARG00000029885rab419888.889ENSECAG00000022694-9988.889Equus_caballus
ENSDARG00000029885rab419890.821ENSELUG00000008876rab6a9990.821Esox_lucius
ENSDARG00000029885rab419888.889ENSFCAG00000023834RAB6A9988.889Felis_catus
ENSDARG00000029885rab419888.889ENSFALG00000008011RAB6A9988.889Ficedula_albicollis
ENSDARG00000029885rab419889.372ENSFDAG00000010948-9989.372Fukomys_damarensis
ENSDARG00000029885rab4110096.682ENSGMOG00000004095rab4110096.682Gadus_morhua
ENSDARG00000029885rab419888.889ENSGALG00000017320RAB6A9988.889Gallus_gallus
ENSDARG00000029885rab4110094.313ENSGALG00000026278-10094.313Gallus_gallus
ENSDARG00000029885rab4110097.156ENSGAFG00000019872rab4110097.156Gambusia_affinis
ENSDARG00000029885rab419889.855ENSGAFG00000006356rab6a9989.855Gambusia_affinis
ENSDARG00000029885rab419888.406ENSGACG00000020356rab6a9988.406Gasterosteus_aculeatus
ENSDARG00000029885rab4110098.104ENSGACG00000017153rab4110098.104Gasterosteus_aculeatus
ENSDARG00000029885rab4110088.626ENSGAGG00000021701RAB6A9990.244Gopherus_agassizii
ENSDARG00000029885rab4110088.152ENSGGOG00000010610RAB6A9989.756Gorilla_gorilla
ENSDARG00000029885rab419889.855ENSHBUG00000000890rab6a9989.855Haplochromis_burtoni
ENSDARG00000029885rab419889.372ENSHGLG00000008829-9989.372Heterocephalus_glaber_female
ENSDARG00000029885rab419888.406ENSHGLG00100014550-9988.406Heterocephalus_glaber_male
ENSDARG00000029885rab4110096.682ENSHCOG00000004404rab4110096.682Hippocampus_comes
ENSDARG00000029885rab4110086.730ENSHCOG00000006550-9989.268Hippocampus_comes
ENSDARG00000029885rab419788.780ENSIPUG00000021740rab6a9988.780Ictalurus_punctatus
ENSDARG00000029885rab4110098.104ENSIPUG00000019382rab4110098.104Ictalurus_punctatus
ENSDARG00000029885rab419888.889ENSSTOG00000023497RAB6A9988.889Ictidomys_tridecemlineatus
ENSDARG00000029885rab417890.909ENSKMAG00000013146-8690.909Kryptolebias_marmoratus
ENSDARG00000029885rab419888.889ENSLBEG00000003748rab6a9988.889Labrus_bergylta
ENSDARG00000029885rab4110094.313ENSLACG00000013980rab4110094.313Latimeria_chalumnae
ENSDARG00000029885rab419890.821ENSLACG00000005168RAB6A9990.821Latimeria_chalumnae
ENSDARG00000029885rab419997.608ENSLOCG00000015191rab419997.608Lepisosteus_oculatus
ENSDARG00000029885rab419888.889ENSMFAG00000041027RAB6A9988.889Macaca_fascicularis
ENSDARG00000029885rab419888.889ENSMNEG00000029216RAB6A9988.889Macaca_nemestrina
ENSDARG00000029885rab419888.889ENSMLEG00000038771RAB6A9988.889Mandrillus_leucophaeus
ENSDARG00000029885rab419889.855ENSMAMG00000012488rab6a9989.855Mastacembelus_armatus
ENSDARG00000029885rab4110096.209ENSMAMG00000020859rab4110096.209Mastacembelus_armatus
ENSDARG00000029885rab419889.855ENSMZEG00005023181rab6a9989.855Maylandia_zebra
ENSDARG00000029885rab419888.889ENSMICG00000031565RAB6A9988.889Microcebus_murinus
ENSDARG00000029885rab419888.889ENSMOCG00000014387Rab6a9988.889Microtus_ochrogaster
ENSDARG00000029885rab419888.889ENSMMOG00000016209rab6a9988.889Mola_mola
ENSDARG00000029885rab419694.554ENSMMOG00000001992rab419294.554Mola_mola
ENSDARG00000029885rab419889.372ENSMODG00000007600RAB6A9989.372Monodelphis_domestica
ENSDARG00000029885rab419887.923ENSMALG00000020364-9987.923Monopterus_albus
ENSDARG00000029885rab4110097.156ENSMALG00000010549rab4110097.156Monopterus_albus
ENSDARG00000029885rab419888.889MGP_CAROLIEiJ_G0030051Rab6a9988.889Mus_caroli
ENSDARG00000029885rab419888.889ENSMUSG00000030704Rab6a9988.889Mus_musculus
ENSDARG00000029885rab419888.889MGP_PahariEiJ_G0013273Rab6a9988.889Mus_pahari
ENSDARG00000029885rab419888.889MGP_SPRETEiJ_G0031162Rab6a9988.889Mus_spretus
ENSDARG00000029885rab419888.889ENSMPUG00000009724RAB6A9988.889Mustela_putorius_furo
ENSDARG00000029885rab419888.406ENSNGAG00000014566Rab6a9988.406Nannospalax_galili
ENSDARG00000029885rab4110097.156ENSNBRG00000022702rab4110097.156Neolamprologus_brichardi
ENSDARG00000029885rab419889.855ENSNBRG00000016716rab6a9989.855Neolamprologus_brichardi
ENSDARG00000029885rab419888.889ENSNLEG00000017098RAB6A9988.889Nomascus_leucogenys
ENSDARG00000029885rab419889.372ENSMEUG00000010026RAB6A9989.372Notamacropus_eugenii
ENSDARG00000029885rab418989.894ENSOPRG00000010355RAB6A9989.894Ochotona_princeps
ENSDARG00000029885rab419889.372ENSODEG00000005942RAB6A9989.372Octodon_degus
ENSDARG00000029885rab419888.406ENSONIG00000004394rab6a9988.406Oreochromis_niloticus
ENSDARG00000029885rab419888.406ENSOCUG00000009297RAB6A9988.406Oryctolagus_cuniculus
ENSDARG00000029885rab419890.338ENSORLG00000026197rab6a9990.338Oryzias_latipes
ENSDARG00000029885rab419688.095ENSORLG00000000937-9888.095Oryzias_latipes
ENSDARG00000029885rab4110096.209ENSORLG00020000604rab4110096.209Oryzias_latipes_hni
ENSDARG00000029885rab419888.889ENSORLG00020001816rab6a9988.889Oryzias_latipes_hni
ENSDARG00000029885rab419890.338ENSORLG00015006162rab6a9990.338Oryzias_latipes_hsok
ENSDARG00000029885rab419890.338ENSOMEG00000004379-9990.338Oryzias_melastigma
ENSDARG00000029885rab419887.923ENSOGAG00000027043RAB6A9987.923Otolemur_garnettii
ENSDARG00000029885rab419888.889ENSOARG00000007994RAB6A9988.889Ovis_aries
ENSDARG00000029885rab4110088.152ENSPPAG00000011436RAB6A9989.756Pan_paniscus
ENSDARG00000029885rab419888.889ENSPPRG00000009543RAB6A9988.889Panthera_pardus
ENSDARG00000029885rab4110088.152ENSPTRG00000044137RAB6A9989.756Pan_troglodytes
ENSDARG00000029885rab419888.889ENSPANG00000014356RAB6A9988.889Papio_anubis
ENSDARG00000029885rab4110094.313ENSPKIG00000018584rab4110094.313Paramormyrops_kingsleyae
ENSDARG00000029885rab4110087.678ENSPMGG00000010067-10087.678Periophthalmus_magnuspinnatus
ENSDARG00000029885rab419889.855ENSPFOG00000019509rab6a9989.855Poecilia_formosa
ENSDARG00000029885rab4110098.104ENSPLAG00000000376rab4110098.104Poecilia_latipinna
ENSDARG00000029885rab419888.406ENSPLAG00000019570rab6a9988.406Poecilia_latipinna
ENSDARG00000029885rab4110098.104ENSPMEG00000014170rab4110098.104Poecilia_mexicana
ENSDARG00000029885rab419889.855ENSPMEG00000003369rab6a9989.855Poecilia_mexicana
ENSDARG00000029885rab419889.855ENSPREG00000021505rab6a9989.855Poecilia_reticulata
ENSDARG00000029885rab419789.756ENSPPYG00000003663RAB6A9989.756Pongo_abelii
ENSDARG00000029885rab418890.323ENSPCAG00000006752RAB6A9990.323Procavia_capensis
ENSDARG00000029885rab419888.889ENSPCOG00000021991RAB6A9988.889Propithecus_coquereli
ENSDARG00000029885rab419888.889ENSPVAG00000017342RAB6A9988.889Pteropus_vampyrus
ENSDARG00000029885rab419889.855ENSPNYG00000020556rab6a9989.855Pundamilia_nyererei
ENSDARG00000029885rab4110097.156ENSPNYG00000013288rab4110097.156Pundamilia_nyererei
ENSDARG00000029885rab4110099.052ENSPNAG00000021737rab4110099.052Pygocentrus_nattereri
ENSDARG00000029885rab419888.889ENSRNOG00000018176Rab6a9988.889Rattus_norvegicus
ENSDARG00000029885rab419888.889ENSRBIG00000030390RAB6A9988.889Rhinopithecus_bieti
ENSDARG00000029885rab419888.889ENSRROG00000042103RAB6A9988.889Rhinopithecus_roxellana
ENSDARG00000029885rab419876.329ENSSBOG00000028389RAB6A9976.329Saimiri_boliviensis_boliviensis
ENSDARG00000029885rab419889.372ENSSFOG00015002077rab6a9989.372Scleropages_formosus
ENSDARG00000029885rab419696.552ENSSFOG00015004941rab4110094.419Scleropages_formosus
ENSDARG00000029885rab419889.372ENSSMAG00000017205-9989.372Scophthalmus_maximus
ENSDARG00000029885rab4110097.630ENSSMAG00000015774rab4110097.630Scophthalmus_maximus
ENSDARG00000029885rab419890.338ENSSDUG00000013496-9990.338Seriola_dumerili
ENSDARG00000029885rab419890.338ENSSLDG00000015289-9990.338Seriola_lalandi_dorsalis
ENSDARG00000029885rab4110097.156ENSSLDG00000022282rab4110097.156Seriola_lalandi_dorsalis
ENSDARG00000029885rab4110092.891ENSSPUG00000001533-10092.891Sphenodon_punctatus
ENSDARG00000029885rab419888.889ENSSPUG00000017301RAB6A9988.889Sphenodon_punctatus
ENSDARG00000029885rab419888.889ENSSPAG00000001067-9988.889Stegastes_partitus
ENSDARG00000029885rab4110097.156ENSSPAG00000006001rab4110097.156Stegastes_partitus
ENSDARG00000029885rab419888.889ENSSSCG00000014828RAB6A9988.889Sus_scrofa
ENSDARG00000029885rab419889.372ENSTGUG00000013470RAB6A9989.372Taeniopygia_guttata
ENSDARG00000029885rab4110088.626ENSTRUG00000023252rab6a9990.244Takifugu_rubripes
ENSDARG00000029885rab4110097.156ENSTRUG00000009223rab4110097.156Takifugu_rubripes
ENSDARG00000029885rab419888.406ENSTTRG00000005374RAB6A9988.406Tursiops_truncatus
ENSDARG00000029885rab419884.058ENSUMAG00000010248RAB6A9984.058Ursus_maritimus
ENSDARG00000029885rab419888.889ENSVVUG00000024550RAB6A9988.889Vulpes_vulpes
ENSDARG00000029885rab419877.778ENSXETG00000031363-9977.778Xenopus_tropicalis
ENSDARG00000029885rab418988.830ENSXETG00000023200rab6a9988.830Xenopus_tropicalis
ENSDARG00000029885rab419888.406ENSXCOG00000006259rab6a9988.406Xiphophorus_couchianus
ENSDARG00000029885rab419889.855ENSXMAG00000011903rab6a9989.855Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity-IEAFunction
GO:0005525GTP binding-IEAFunction
GO:0005794Golgi apparatus21873635.IBAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0006890retrograde vesicle-mediated transport, Golgi to ER21873635.IBAProcess
GO:0006891intra-Golgi vesicle-mediated transport21873635.IBAProcess
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0042147retrograde transport, endosome to Golgi21873635.IBAProcess

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