EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000030560 (Gene tree)
Gene ID: 406550
Gene Symbol: helz
Alias: wu:fd51f08|zgc:77407
Full Name: helicase with zinc finger
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 77038 bases
Position: chr3:60957512-61034549
Accession: ZDB-GENE-040426-2419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000042673	zf-CCCH	PF00642.24	9.3e-07	1	1
ENSDARP00000044095	zf-CCCH	PF00642.24	9.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000154211	-	938	-	-	- (aa)	-	-
ENSDART00000044096	-	5880	XM_021470068	ENSDARP00000044095	1860 (aa)	XP_021325743	F1QNJ7
ENSDART00000042674	-	6166	-	ENSDARP00000042673	1797 (aa)	-	A0A0A0MPG4

Gene Model

Click here to download ENSDARG00000030560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000030560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000030560	helz	74	71.306	ENSG00000198265	HELZ	97	77.065	Homo_sapiens
ENSDARG00000030560	helz	100	65.681	ENSAPOG00000001626	helz	100	66.376	Acanthochromis_polyacanthus
ENSDARG00000030560	helz	73	72.254	ENSAMEG00000018396	HELZ	100	61.608	Ailuropoda_melanoleuca
ENSDARG00000030560	helz	100	66.197	ENSATEG00000007191	helz	100	66.294	Anabas_testudineus
ENSDARG00000030560	helz	100	62.494	ENSAPLG00000007762	HELZ	100	62.974	Anas_platyrhynchos
ENSDARG00000030560	helz	100	61.248	ENSACAG00000000206	HELZ	100	61.461	Anolis_carolinensis
ENSDARG00000030560	helz	74	71.357	ENSANAG00000037949	HELZ	100	61.659	Aotus_nancymaae
ENSDARG00000030560	helz	99	81.951	ENSAMXG00000020742	helz	100	82.082	Astyanax_mexicanus
ENSDARG00000030560	helz	100	61.086	ENSBTAG00000004746	HELZ	100	61.667	Bos_taurus
ENSDARG00000030560	helz	74	71.357	ENSCJAG00000032527	HELZ	100	61.570	Callithrix_jacchus
ENSDARG00000030560	helz	100	60.985	ENSCAFG00000011422	HELZ	100	61.500	Canis_familiaris
ENSDARG00000030560	helz	100	60.704	ENSCAFG00020026103	HELZ	100	61.217	Canis_lupus_dingo
ENSDARG00000030560	helz	100	61.046	ENSCHIG00000002760	HELZ	100	61.702	Capra_hircus
ENSDARG00000030560	helz	91	73.984	ENSTSYG00000009414	HELZ	93	72.614	Carlito_syrichta
ENSDARG00000030560	helz	70	61.006	ENSCAPG00000013940	HELZ	98	55.258	Cavia_aperea
ENSDARG00000030560	helz	74	71.378	ENSCATG00000037268	HELZ	100	61.628	Cercocebus_atys
ENSDARG00000030560	helz	74	71.714	ENSCLAG00000004638	HELZ	100	61.772	Chinchilla_lanigera
ENSDARG00000030560	helz	74	71.306	ENSCSAG00000004152	HELZ	100	61.577	Chlorocebus_sabaeus
ENSDARG00000030560	helz	100	62.513	ENSCPBG00000009548	HELZ	100	62.715	Chrysemys_picta_bellii
ENSDARG00000030560	helz	66	72.702	ENSCANG00000029169	HELZ	99	70.625	Colobus_angolensis_palliatus
ENSDARG00000030560	helz	99	64.075	ENSCSEG00000012232	helz	99	64.397	Cynoglossus_semilaevis
ENSDARG00000030560	helz	72	73.563	ENSDNOG00000007899	HELZ	100	61.678	Dasypus_novemcinctus
ENSDARG00000030560	helz	56	80.000	ENSEASG00005015902	HELZ	96	80.000	Equus_asinus_asinus
ENSDARG00000030560	helz	100	60.603	ENSECAG00000010404	HELZ	100	61.577	Equus_caballus
ENSDARG00000030560	helz	99	66.365	ENSELUG00000014335	helz	100	66.076	Esox_lucius
ENSDARG00000030560	helz	100	60.475	ENSFCAG00000011711	HELZ	100	61.114	Felis_catus
ENSDARG00000030560	helz	74	71.571	ENSFDAG00000008065	HELZ	99	66.247	Fukomys_damarensis
ENSDARG00000030560	helz	100	66.017	ENSFHEG00000016609	helz	100	66.130	Fundulus_heteroclitus
ENSDARG00000030560	helz	72	76.173	ENSGMOG00000009758	helz	99	76.096	Gadus_morhua
ENSDARG00000030560	helz	99	62.931	ENSGALG00000027152	HELZ	99	63.420	Gallus_gallus
ENSDARG00000030560	helz	71	77.778	ENSGACG00000018530	helz	92	76.505	Gasterosteus_aculeatus
ENSDARG00000030560	helz	77	60.884	ENSGAGG00000006506	-	98	67.821	Gopherus_agassizii
ENSDARG00000030560	helz	74	71.235	ENSGGOG00000012312	HELZ	100	61.325	Gorilla_gorilla
ENSDARG00000030560	helz	100	65.918	ENSHBUG00000015322	helz	100	66.292	Haplochromis_burtoni
ENSDARG00000030560	helz	73	64.425	ENSHGLG00000000732	HELZ	100	56.130	Heterocephalus_glaber_female
ENSDARG00000030560	helz	73	72.162	ENSHGLG00100002144	HELZ	100	61.499	Heterocephalus_glaber_male
ENSDARG00000030560	helz	100	67.356	ENSHCOG00000019617	helz	100	67.460	Hippocampus_comes
ENSDARG00000030560	helz	99	78.655	ENSIPUG00000003010	helz	100	78.713	Ictalurus_punctatus
ENSDARG00000030560	helz	71	73.737	ENSJJAG00000019941	Helz	100	61.414	Jaculus_jaculus
ENSDARG00000030560	helz	99	69.392	ENSKMAG00000017251	helz	96	69.835	Kryptolebias_marmoratus
ENSDARG00000030560	helz	99	62.327	ENSLACG00000010742	HELZ	100	61.612	Latimeria_chalumnae
ENSDARG00000030560	helz	100	70.056	ENSLOCG00000013617	helz	100	70.245	Lepisosteus_oculatus
ENSDARG00000030560	helz	100	62.750	ENSLAFG00000003860	HELZ	100	63.133	Loxodonta_africana
ENSDARG00000030560	helz	74	71.306	ENSMFAG00000045166	HELZ	100	61.577	Macaca_fascicularis
ENSDARG00000030560	helz	74	71.306	ENSMMUG00000002959	HELZ	100	61.577	Macaca_mulatta
ENSDARG00000030560	helz	74	71.235	ENSMNEG00000037121	HELZ	100	61.527	Macaca_nemestrina
ENSDARG00000030560	helz	74	71.306	ENSMLEG00000039575	HELZ	100	61.577	Mandrillus_leucophaeus
ENSDARG00000030560	helz	99	68.182	ENSMAMG00000016108	helz	95	69.161	Mastacembelus_armatus
ENSDARG00000030560	helz	100	65.886	ENSMZEG00005001957	helz	100	66.260	Maylandia_zebra
ENSDARG00000030560	helz	73	74.001	ENSMGAG00000007422	HELZ	100	63.418	Meleagris_gallopavo
ENSDARG00000030560	helz	100	60.040	ENSMAUG00000013803	Helz	100	60.626	Mesocricetus_auratus
ENSDARG00000030560	helz	99	62.178	ENSMODG00000004034	HELZ	99	61.804	Monodelphis_domestica
ENSDARG00000030560	helz	100	60.612	MGP_CAROLIEiJ_G0017337	Helz	99	65.363	Mus_caroli
ENSDARG00000030560	helz	100	60.481	ENSMUSG00000020721	Helz	99	65.096	Mus_musculus
ENSDARG00000030560	helz	95	73.798	MGP_PahariEiJ_G0018467	Helz	99	65.382	Mus_pahari
ENSDARG00000030560	helz	100	60.799	MGP_SPRETEiJ_G0018181	Helz	99	65.955	Mus_spretus
ENSDARG00000030560	helz	100	62.184	ENSMPUG00000014672	HELZ	100	62.532	Mustela_putorius_furo
ENSDARG00000030560	helz	71	74.435	ENSMLUG00000000962	HELZ	100	62.032	Myotis_lucifugus
ENSDARG00000030560	helz	100	59.707	ENSNGAG00000023219	Helz	100	61.196	Nannospalax_galili
ENSDARG00000030560	helz	78	66.351	ENSNBRG00000003933	helz	99	66.351	Neolamprologus_brichardi
ENSDARG00000030560	helz	100	67.569	ENSONIG00000006486	helz	100	68.036	Oreochromis_niloticus
ENSDARG00000030560	helz	100	60.712	ENSOANG00000008056	HELZ	100	61.345	Ornithorhynchus_anatinus
ENSDARG00000030560	helz	99	61.105	ENSOCUG00000008856	HELZ	99	62.078	Oryctolagus_cuniculus
ENSDARG00000030560	helz	100	68.281	ENSORLG00000013894	helz	100	68.454	Oryzias_latipes
ENSDARG00000030560	helz	100	68.922	ENSORLG00020021251	helz	100	69.199	Oryzias_latipes_hni
ENSDARG00000030560	helz	100	65.527	ENSORLG00015022086	helz	100	66.177	Oryzias_latipes_hsok
ENSDARG00000030560	helz	98	66.282	ENSOMEG00000008739	helz	100	66.316	Oryzias_melastigma
ENSDARG00000030560	helz	100	61.125	ENSOARG00000015884	HELZ	100	61.835	Ovis_aries
ENSDARG00000030560	helz	74	71.306	ENSPPAG00000036899	HELZ	100	61.426	Pan_paniscus
ENSDARG00000030560	helz	100	60.536	ENSPPRG00000024752	HELZ	100	61.215	Panthera_pardus
ENSDARG00000030560	helz	100	60.081	ENSPTIG00000020571	HELZ	100	60.810	Panthera_tigris_altaica
ENSDARG00000030560	helz	65	75.106	ENSPANG00000020569	HELZ	100	62.256	Papio_anubis
ENSDARG00000030560	helz	100	71.186	ENSPKIG00000006157	helz	100	71.032	Paramormyrops_kingsleyae
ENSDARG00000030560	helz	100	62.747	ENSPSIG00000005225	HELZ	100	62.759	Pelodiscus_sinensis
ENSDARG00000030560	helz	88	66.706	ENSPMGG00000002314	helz	94	66.589	Periophthalmus_magnuspinnatus
ENSDARG00000030560	helz	100	68.360	ENSPFOG00000013386	helz	100	68.360	Poecilia_formosa
ENSDARG00000030560	helz	99	66.496	ENSPLAG00000020664	helz	98	66.437	Poecilia_latipinna
ENSDARG00000030560	helz	100	65.919	ENSPMEG00000011144	helz	100	67.079	Poecilia_mexicana
ENSDARG00000030560	helz	100	65.819	ENSPREG00000000245	helz	100	66.536	Poecilia_reticulata
ENSDARG00000030560	helz	78	75.353	ENSPPYG00000008564	-	100	73.193	Pongo_abelii
ENSDARG00000030560	helz	65	70.261	ENSPCAG00000001731	HELZ	95	68.156	Procavia_capensis
ENSDARG00000030560	helz	100	65.935	ENSPNYG00000018395	helz	100	66.309	Pundamilia_nyererei
ENSDARG00000030560	helz	99	81.918	ENSPNAG00000016575	helz	100	82.552	Pygocentrus_nattereri
ENSDARG00000030560	helz	100	60.140	ENSRNOG00000003213	Helz	100	60.702	Rattus_norvegicus
ENSDARG00000030560	helz	74	70.513	ENSRBIG00000026299	HELZ	99	62.060	Rhinopithecus_bieti
ENSDARG00000030560	helz	74	71.306	ENSRROG00000038961	HELZ	100	61.476	Rhinopithecus_roxellana
ENSDARG00000030560	helz	100	60.859	ENSSBOG00000033082	HELZ	100	61.507	Saimiri_boliviensis_boliviensis
ENSDARG00000030560	helz	100	69.753	ENSSFOG00015005413	helz	100	69.547	Scleropages_formosus
ENSDARG00000030560	helz	99	70.069	ENSSMAG00000018328	helz	96	70.592	Scophthalmus_maximus
ENSDARG00000030560	helz	100	65.269	ENSSLDG00000000611	helz	97	70.249	Seriola_lalandi_dorsalis
ENSDARG00000030560	helz	67	77.612	ENSSARG00000004508	HELZ	74	77.612	Sorex_araneus
ENSDARG00000030560	helz	100	61.774	ENSSPUG00000011226	HELZ	100	62.099	Sphenodon_punctatus
ENSDARG00000030560	helz	99	69.612	ENSSPAG00000012867	helz	96	70.090	Stegastes_partitus
ENSDARG00000030560	helz	100	61.295	ENSSSCG00000017272	HELZ	91	72.307	Sus_scrofa
ENSDARG00000030560	helz	73	74.365	ENSTGUG00000004401	HELZ	100	62.834	Taeniopygia_guttata
ENSDARG00000030560	helz	91	66.685	ENSTRUG00000000488	helz	99	66.560	Takifugu_rubripes
ENSDARG00000030560	helz	100	67.688	ENSTNIG00000014131	helz	100	67.759	Tetraodon_nigroviridis
ENSDARG00000030560	helz	73	78.571	ENSTBEG00000003140	HELZ	82	78.571	Tupaia_belangeri
ENSDARG00000030560	helz	100	60.121	ENSTTRG00000016778	HELZ	100	61.246	Tursiops_truncatus
ENSDARG00000030560	helz	89	63.631	ENSUAMG00000005560	HELZ	99	63.345	Ursus_americanus
ENSDARG00000030560	helz	87	75.042	ENSUMAG00000018753	HELZ	99	73.520	Ursus_maritimus
ENSDARG00000030560	helz	99	60.452	ENSVPAG00000001848	HELZ	100	60.863	Vicugna_pacos
ENSDARG00000030560	helz	100	60.985	ENSVVUG00000006563	HELZ	99	62.710	Vulpes_vulpes
ENSDARG00000030560	helz	100	62.602	ENSXETG00000015395	helz	100	62.519	Xenopus_tropicalis
ENSDARG00000030560	helz	100	65.806	ENSXMAG00000006535	helz	100	66.079	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003700	DNA-binding transcription factor activity	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0035194	posttranscriptional gene silencing by RNA	21873635.	IBA	Process
GO:0043186	P granule	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function