EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000031494 (Gene tree)
Gene ID: 394248
Gene Symbol: prrc2a
Alias: bat2|fb96a05|wu:fb96a05
Full Name: proline-rich coiled-coil 2A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 30271
Position: chr19: 26739813-26770083
Accession: ZDB-GENE-010501-4
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000043776	-	8416	-	ENSDARP00000043775	1921 (aa)	-	Q1LWP7
ENSDART00000159489	-	1766	-	ENSDARP00000131038	99 (aa)	-	Q1LWP8
ENSDART00000174455	-	9242	XM_005170017	ENSDARP00000143356	1892 (aa)	XP_005170074	A0A286Y889
ENSDART00000193811	-	9335	XM_005170015	ENSDARP00000145911	1923 (aa)	XP_005170072	A0A2R8PXX5
ENSDART00000138675	-	8210	-	ENSDARP00000121205	1890 (aa)	-	E9QC91

Gene Model

Click here to download ENSDARG00000031494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000031494's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000031494	prrc2a	81	77.500	ENSDARG00000057583	prrc2c	53	39.316	Danio_rerio
ENSDARG00000031494	prrc2a	99	60.204	ENSG00000130723	PRRC2B	89	67.647	Homo_sapiens
ENSDARG00000031494	prrc2a	81	73.750	ENSG00000117523	PRRC2C	67	39.583	Homo_sapiens
ENSDARG00000031494	prrc2a	81	73.750	ENSMUSG00000040225	Prrc2c	100	57.222	Mus_musculus