EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000032117 (Gene tree)
Gene ID: 556790
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 14463 bases
Position: chr20:33175190-33189652
Accession: ZDB-GENE-041001-215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121049	DEAD	PF00270.29	1.7e-71	1	1
ENSDARP00000008636	DEAD	PF00270.29	1.7e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000023963	-	2283	-	ENSDARP00000008636	740 (aa)	-	F1R2L8
ENSDART00000131785	-	2231	-	ENSDARP00000121049	734 (aa)	-	F1R3T3

Gene Model

Click here to download ENSDARG00000032117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000032117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000032117	ddx1	64	42.424	ENSDARG00000012899	ddx49	87	42.424
ENSDARG00000032117	ddx1	54	37.097	ENSDARG00000014373	ddx4	50	37.097
ENSDARG00000032117	ddx1	52	39.655	ENSDARG00000060411	ddx28	61	39.655
ENSDARG00000032117	ddx1	52	45.098	ENSDARG00000061338	ddx6	67	45.098
ENSDARG00000032117	ddx1	53	45.098	ENSDARG00000018425	ddx61	68	45.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000032117	ddx1	100	84.877	ENSG00000079785	DDX1	100	84.865	Homo_sapiens
ENSDARG00000032117	ddx1	100	87.875	ENSAPOG00000003166	ddx1	100	87.875	Acanthochromis_polyacanthus
ENSDARG00000032117	ddx1	100	84.239	ENSAMEG00000001071	DDX1	99	84.239	Ailuropoda_melanoleuca
ENSDARG00000032117	ddx1	89	86.565	ENSACIG00000017422	ddx1	99	87.328	Amphilophus_citrinellus
ENSDARG00000032117	ddx1	91	83.929	ENSAOCG00000015436	ddx1	95	86.583	Amphiprion_ocellaris
ENSDARG00000032117	ddx1	100	88.692	ENSAPEG00000007699	ddx1	100	88.692	Amphiprion_percula
ENSDARG00000032117	ddx1	94	88.728	ENSATEG00000003965	ddx1	98	88.244	Anabas_testudineus
ENSDARG00000032117	ddx1	100	85.095	ENSAPLG00000011093	DDX1	100	85.081	Anas_platyrhynchos
ENSDARG00000032117	ddx1	94	84.971	ENSACAG00000011036	DDX1	99	84.971	Anolis_carolinensis
ENSDARG00000032117	ddx1	100	84.877	ENSANAG00000037912	DDX1	100	84.865	Aotus_nancymaae
ENSDARG00000032117	ddx1	100	88.556	ENSACLG00000008850	ddx1	99	87.939	Astatotilapia_calliptera
ENSDARG00000032117	ddx1	100	91.757	ENSAMXG00000002100	ddx1	100	91.757	Astyanax_mexicanus
ENSDARG00000032117	ddx1	100	84.877	ENSBTAG00000009906	DDX1	100	84.865	Bos_taurus
ENSDARG00000032117	ddx1	98	47.011	WBGene00021938	Y55F3BR.1	98	47.011	Caenorhabditis_elegans
ENSDARG00000032117	ddx1	100	84.877	ENSCJAG00000007076	DDX1	100	84.865	Callithrix_jacchus
ENSDARG00000032117	ddx1	100	84.741	ENSCAFG00000003686	DDX1	100	84.730	Canis_familiaris
ENSDARG00000032117	ddx1	100	84.741	ENSCAFG00020026083	DDX1	100	84.730	Canis_lupus_dingo
ENSDARG00000032117	ddx1	100	85.014	ENSCHIG00000011046	DDX1	100	85.000	Capra_hircus
ENSDARG00000032117	ddx1	99	60.787	ENSTSYG00000037396	-	97	63.126	Carlito_syrichta
ENSDARG00000032117	ddx1	100	84.332	ENSTSYG00000002477	-	100	84.324	Carlito_syrichta
ENSDARG00000032117	ddx1	87	69.518	ENSCAPG00000008906	-	93	69.518	Cavia_aperea
ENSDARG00000032117	ddx1	88	82.848	ENSCPOG00000009816	-	96	82.848	Cavia_porcellus
ENSDARG00000032117	ddx1	68	83.068	ENSCPOG00000032467	-	100	83.068	Cavia_porcellus
ENSDARG00000032117	ddx1	100	84.877	ENSCCAG00000030085	DDX1	100	84.865	Cebus_capucinus
ENSDARG00000032117	ddx1	100	84.741	ENSCATG00000033924	DDX1	100	84.730	Cercocebus_atys
ENSDARG00000032117	ddx1	100	84.877	ENSCLAG00000005434	DDX1	100	84.865	Chinchilla_lanigera
ENSDARG00000032117	ddx1	100	84.741	ENSCSAG00000007883	DDX1	100	84.730	Chlorocebus_sabaeus
ENSDARG00000032117	ddx1	70	88.836	ENSCHOG00000002171	DDX1	70	88.836	Choloepus_hoffmanni
ENSDARG00000032117	ddx1	100	80.272	ENSCPBG00000013330	DDX1	99	84.091	Chrysemys_picta_bellii
ENSDARG00000032117	ddx1	100	64.459	ENSCING00000001176	-	100	64.572	Ciona_intestinalis
ENSDARG00000032117	ddx1	99	60.219	ENSCSAVG00000003028	-	99	60.219	Ciona_savignyi
ENSDARG00000032117	ddx1	100	84.741	ENSCANG00000031530	DDX1	100	84.730	Colobus_angolensis_palliatus
ENSDARG00000032117	ddx1	100	84.196	ENSCGRG00001013025	Ddx1	100	84.189	Cricetulus_griseus_chok1gshd
ENSDARG00000032117	ddx1	100	84.196	ENSCGRG00000000676	Ddx1	100	84.189	Cricetulus_griseus_crigri
ENSDARG00000032117	ddx1	100	88.147	ENSCSEG00000002630	ddx1	100	88.147	Cynoglossus_semilaevis
ENSDARG00000032117	ddx1	100	86.649	ENSCVAG00000020927	ddx1	100	86.649	Cyprinodon_variegatus
ENSDARG00000032117	ddx1	100	84.741	ENSDNOG00000006905	DDX1	100	84.730	Dasypus_novemcinctus
ENSDARG00000032117	ddx1	100	84.469	ENSDORG00000012847	Ddx1	100	84.459	Dipodomys_ordii
ENSDARG00000032117	ddx1	98	58.140	FBgn0015075	Ddx1	99	58.687	Drosophila_melanogaster
ENSDARG00000032117	ddx1	100	76.351	ENSETEG00000014259	DDX1	100	76.351	Echinops_telfairi
ENSDARG00000032117	ddx1	64	76.695	ENSEBUG00000009800	-	99	76.695	Eptatretus_burgeri
ENSDARG00000032117	ddx1	100	84.877	ENSEASG00005009335	DDX1	92	84.865	Equus_asinus_asinus
ENSDARG00000032117	ddx1	95	83.931	ENSECAG00000016396	DDX1	100	83.931	Equus_caballus
ENSDARG00000032117	ddx1	89	83.396	ENSEEUG00000001606	DDX1	89	83.396	Erinaceus_europaeus
ENSDARG00000032117	ddx1	100	87.619	ENSELUG00000006743	ddx1	100	87.619	Esox_lucius
ENSDARG00000032117	ddx1	100	84.741	ENSFCAG00000004680	DDX1	100	84.730	Felis_catus
ENSDARG00000032117	ddx1	100	85.967	ENSFALG00000008696	DDX1	100	85.946	Ficedula_albicollis
ENSDARG00000032117	ddx1	100	84.196	ENSFDAG00000021305	DDX1	100	84.189	Fukomys_damarensis
ENSDARG00000032117	ddx1	100	87.738	ENSFHEG00000008444	ddx1	100	87.738	Fundulus_heteroclitus
ENSDARG00000032117	ddx1	100	83.989	ENSGMOG00000011300	ddx1	100	83.984	Gadus_morhua
ENSDARG00000032117	ddx1	100	85.286	ENSGALG00000016461	DDX1	100	85.270	Gallus_gallus
ENSDARG00000032117	ddx1	100	88.011	ENSGAFG00000004706	ddx1	100	87.973	Gambusia_affinis
ENSDARG00000032117	ddx1	100	86.649	ENSGACG00000011162	ddx1	100	86.622	Gasterosteus_aculeatus
ENSDARG00000032117	ddx1	100	84.877	ENSGAGG00000021020	DDX1	100	84.865	Gopherus_agassizii
ENSDARG00000032117	ddx1	100	84.877	ENSGGOG00000012482	DDX1	100	84.865	Gorilla_gorilla
ENSDARG00000032117	ddx1	100	88.784	ENSHBUG00000014069	ddx1	100	88.784	Haplochromis_burtoni
ENSDARG00000032117	ddx1	100	83.924	ENSHGLG00000000801	DDX1	100	83.919	Heterocephalus_glaber_female
ENSDARG00000032117	ddx1	100	83.924	ENSHGLG00100000711	DDX1	100	83.924	Heterocephalus_glaber_male
ENSDARG00000032117	ddx1	100	87.602	ENSHCOG00000011492	ddx1	96	87.568	Hippocampus_comes
ENSDARG00000032117	ddx1	100	89.237	ENSIPUG00000003494	ddx1	100	89.189	Ictalurus_punctatus
ENSDARG00000032117	ddx1	100	84.605	ENSSTOG00000003977	DDX1	100	84.605	Ictidomys_tridecemlineatus
ENSDARG00000032117	ddx1	89	80.458	ENSJJAG00000013315	Ddx1	100	80.458	Jaculus_jaculus
ENSDARG00000032117	ddx1	100	88.828	ENSKMAG00000011340	ddx1	100	88.784	Kryptolebias_marmoratus
ENSDARG00000032117	ddx1	89	83.180	ENSLBEG00000008692	ddx1	99	83.180	Labrus_bergylta
ENSDARG00000032117	ddx1	100	84.196	ENSLACG00000010529	DDX1	100	84.189	Latimeria_chalumnae
ENSDARG00000032117	ddx1	100	87.211	ENSLOCG00000016473	ddx1	100	86.595	Lepisosteus_oculatus
ENSDARG00000032117	ddx1	100	84.741	ENSLAFG00000002213	DDX1	99	84.741	Loxodonta_africana
ENSDARG00000032117	ddx1	100	84.741	ENSMFAG00000033987	DDX1	100	84.730	Macaca_fascicularis
ENSDARG00000032117	ddx1	100	84.741	ENSMMUG00000023437	DDX1	100	84.730	Macaca_mulatta
ENSDARG00000032117	ddx1	100	84.741	ENSMNEG00000029189	DDX1	100	84.730	Macaca_nemestrina
ENSDARG00000032117	ddx1	100	84.605	ENSMLEG00000030787	DDX1	100	84.595	Mandrillus_leucophaeus
ENSDARG00000032117	ddx1	100	88.965	ENSMAMG00000015916	ddx1	100	88.919	Mastacembelus_armatus
ENSDARG00000032117	ddx1	100	88.556	ENSMZEG00005015207	ddx1	99	87.939	Maylandia_zebra
ENSDARG00000032117	ddx1	100	81.301	ENSMGAG00000014025	DDX1	100	81.301	Meleagris_gallopavo
ENSDARG00000032117	ddx1	64	97.959	ENSMAUG00000016156	Ddx1	99	97.959	Mesocricetus_auratus
ENSDARG00000032117	ddx1	100	84.469	ENSMICG00000001023	DDX1	100	84.459	Microcebus_murinus
ENSDARG00000032117	ddx1	100	84.196	ENSMOCG00000000257	Ddx1	100	84.189	Microtus_ochrogaster
ENSDARG00000032117	ddx1	89	87.328	ENSMMOG00000015397	ddx1	99	87.328	Mola_mola
ENSDARG00000032117	ddx1	100	85.422	ENSMODG00000010275	DDX1	99	85.422	Monodelphis_domestica
ENSDARG00000032117	ddx1	100	87.738	ENSMALG00000016409	ddx1	100	87.703	Monopterus_albus
ENSDARG00000032117	ddx1	100	84.332	MGP_CAROLIEiJ_G0017622	Ddx1	100	84.324	Mus_caroli
ENSDARG00000032117	ddx1	100	84.196	ENSMUSG00000037149	Ddx1	100	84.189	Mus_musculus
ENSDARG00000032117	ddx1	100	84.332	MGP_PahariEiJ_G0029378	Ddx1	100	84.324	Mus_pahari
ENSDARG00000032117	ddx1	100	84.196	MGP_SPRETEiJ_G0018464	Ddx1	100	84.189	Mus_spretus
ENSDARG00000032117	ddx1	100	84.741	ENSMPUG00000013606	DDX1	100	84.730	Mustela_putorius_furo
ENSDARG00000032117	ddx1	100	84.332	ENSMLUG00000003027	DDX1	98	84.354	Myotis_lucifugus
ENSDARG00000032117	ddx1	100	84.741	ENSNGAG00000015783	Ddx1	100	84.741	Nannospalax_galili
ENSDARG00000032117	ddx1	79	84.801	ENSNBRG00000020677	ddx1	94	84.801	Neolamprologus_brichardi
ENSDARG00000032117	ddx1	100	85.014	ENSNLEG00000014417	DDX1	100	85.000	Nomascus_leucogenys
ENSDARG00000032117	ddx1	99	83.584	ENSMEUG00000008254	DDX1	99	83.584	Notamacropus_eugenii
ENSDARG00000032117	ddx1	100	60.811	ENSOPRG00000004290	DDX1	100	60.811	Ochotona_princeps
ENSDARG00000032117	ddx1	100	84.877	ENSODEG00000000569	DDX1	100	84.865	Octodon_degus
ENSDARG00000032117	ddx1	100	89.339	ENSONIG00000000513	ddx1	100	89.339	Oreochromis_niloticus
ENSDARG00000032117	ddx1	76	82.796	ENSOANG00000005450	DDX1	99	82.796	Ornithorhynchus_anatinus
ENSDARG00000032117	ddx1	100	84.469	ENSOCUG00000007010	DDX1	100	84.459	Oryctolagus_cuniculus
ENSDARG00000032117	ddx1	100	87.466	ENSORLG00000016709	ddx1	100	87.432	Oryzias_latipes
ENSDARG00000032117	ddx1	100	87.602	ENSORLG00020003290	ddx1	100	87.602	Oryzias_latipes_hni
ENSDARG00000032117	ddx1	100	87.330	ENSORLG00015022438	ddx1	100	87.330	Oryzias_latipes_hsok
ENSDARG00000032117	ddx1	100	83.651	ENSOMEG00000017620	ddx1	100	83.514	Oryzias_melastigma
ENSDARG00000032117	ddx1	100	84.647	ENSOGAG00000008730	DDX1	100	84.647	Otolemur_garnettii
ENSDARG00000032117	ddx1	100	84.783	ENSOARG00000016369	DDX1	100	84.783	Ovis_aries
ENSDARG00000032117	ddx1	100	84.741	ENSPPAG00000027432	DDX1	100	84.730	Pan_paniscus
ENSDARG00000032117	ddx1	100	84.741	ENSPPRG00000020556	DDX1	100	84.730	Panthera_pardus
ENSDARG00000032117	ddx1	100	84.741	ENSPTIG00000008267	DDX1	100	84.730	Panthera_tigris_altaica
ENSDARG00000032117	ddx1	100	84.741	ENSPTRG00000011670	DDX1	100	84.730	Pan_troglodytes
ENSDARG00000032117	ddx1	100	84.741	ENSPANG00000025185	DDX1	100	84.730	Papio_anubis
ENSDARG00000032117	ddx1	100	87.193	ENSPKIG00000012466	ddx1	100	87.193	Paramormyrops_kingsleyae
ENSDARG00000032117	ddx1	54	80.893	ENSPSIG00000012292	DDX1	100	80.893	Pelodiscus_sinensis
ENSDARG00000032117	ddx1	100	86.649	ENSPMGG00000000782	ddx1	100	86.486	Periophthalmus_magnuspinnatus
ENSDARG00000032117	ddx1	100	84.877	ENSPEMG00000016389	Ddx1	100	84.865	Peromyscus_maniculatus_bairdii
ENSDARG00000032117	ddx1	100	76.902	ENSPMAG00000009118	-	100	76.902	Petromyzon_marinus
ENSDARG00000032117	ddx1	100	86.240	ENSPCIG00000010941	DDX1	100	86.216	Phascolarctos_cinereus
ENSDARG00000032117	ddx1	87	87.092	ENSPFOG00000006873	-	100	87.092	Poecilia_formosa
ENSDARG00000032117	ddx1	100	88.283	ENSPFOG00000011921	ddx1	100	88.243	Poecilia_formosa
ENSDARG00000032117	ddx1	100	88.283	ENSPLAG00000005939	ddx1	100	88.243	Poecilia_latipinna
ENSDARG00000032117	ddx1	100	88.420	ENSPMEG00000011140	ddx1	100	88.378	Poecilia_mexicana
ENSDARG00000032117	ddx1	100	88.147	ENSPREG00000011751	ddx1	100	88.108	Poecilia_reticulata
ENSDARG00000032117	ddx1	100	84.877	ENSPPYG00000012638	DDX1	100	84.865	Pongo_abelii
ENSDARG00000032117	ddx1	100	72.973	ENSPCAG00000001491	DDX1	100	72.973	Procavia_capensis
ENSDARG00000032117	ddx1	100	82.561	ENSPCOG00000028185	DDX1	99	82.561	Propithecus_coquereli
ENSDARG00000032117	ddx1	100	84.469	ENSPVAG00000013618	DDX1	100	84.459	Pteropus_vampyrus
ENSDARG00000032117	ddx1	100	88.514	ENSPNYG00000013839	ddx1	100	88.514	Pundamilia_nyererei
ENSDARG00000032117	ddx1	89	90.382	ENSPNAG00000017033	ddx1	97	90.382	Pygocentrus_nattereri
ENSDARG00000032117	ddx1	100	84.332	ENSRNOG00000006652	Ddx1	100	84.324	Rattus_norvegicus
ENSDARG00000032117	ddx1	100	84.060	ENSRBIG00000041664	DDX1	100	84.054	Rhinopithecus_bieti
ENSDARG00000032117	ddx1	100	84.741	ENSRROG00000031167	DDX1	100	84.730	Rhinopithecus_roxellana
ENSDARG00000032117	ddx1	100	85.014	ENSSBOG00000027577	DDX1	100	85.000	Saimiri_boliviensis_boliviensis
ENSDARG00000032117	ddx1	100	78.202	ENSSHAG00000009363	DDX1	99	78.202	Sarcophilus_harrisii
ENSDARG00000032117	ddx1	100	87.703	ENSSFOG00015014476	ddx1	100	87.703	Scleropages_formosus
ENSDARG00000032117	ddx1	100	87.330	ENSSMAG00000010094	ddx1	100	87.297	Scophthalmus_maximus
ENSDARG00000032117	ddx1	100	88.420	ENSSDUG00000012334	ddx1	100	88.243	Seriola_dumerili
ENSDARG00000032117	ddx1	100	88.283	ENSSLDG00000025345	ddx1	100	88.108	Seriola_lalandi_dorsalis
ENSDARG00000032117	ddx1	100	76.158	ENSSARG00000004536	DDX1	100	76.158	Sorex_araneus
ENSDARG00000032117	ddx1	100	83.924	ENSSPUG00000018835	DDX1	100	83.784	Sphenodon_punctatus
ENSDARG00000032117	ddx1	100	83.379	ENSSPAG00000023554	ddx1	100	83.378	Stegastes_partitus
ENSDARG00000032117	ddx1	100	84.469	ENSSSCG00000008619	DDX1	100	84.459	Sus_scrofa
ENSDARG00000032117	ddx1	100	85.695	ENSTGUG00000013096	DDX1	100	85.270	Taeniopygia_guttata
ENSDARG00000032117	ddx1	100	87.738	ENSTRUG00000015765	ddx1	99	87.738	Takifugu_rubripes
ENSDARG00000032117	ddx1	100	88.147	ENSTNIG00000016309	ddx1	100	88.108	Tetraodon_nigroviridis
ENSDARG00000032117	ddx1	100	81.335	ENSTBEG00000008454	DDX1	100	81.335	Tupaia_belangeri
ENSDARG00000032117	ddx1	100	84.332	ENSTTRG00000005081	DDX1	100	84.324	Tursiops_truncatus
ENSDARG00000032117	ddx1	69	74.067	ENSUAMG00000017375	DDX1	92	74.067	Ursus_americanus
ENSDARG00000032117	ddx1	100	84.605	ENSUMAG00000023450	DDX1	100	84.605	Ursus_maritimus
ENSDARG00000032117	ddx1	85	88.124	ENSVPAG00000007764	DDX1	85	88.124	Vicugna_pacos
ENSDARG00000032117	ddx1	100	84.741	ENSVVUG00000013085	DDX1	96	84.762	Vulpes_vulpes
ENSDARG00000032117	ddx1	100	85.422	ENSXETG00000017825	ddx1	100	85.405	Xenopus_tropicalis
ENSDARG00000032117	ddx1	100	85.290	ENSXCOG00000007082	ddx1	100	85.274	Xiphophorus_couchianus
ENSDARG00000032117	ddx1	100	87.738	ENSXMAG00000004555	ddx1	100	87.703	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function