EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000032516 (Gene tree)
Gene ID: 321183
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8594 bases
Position: chr22:15343953-15352546
Accession: ZDB-GENE-030131-9751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000045681	RRP36	PF06102.12	2e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000045682	-	1398	-	ENSDARP00000045681	320 (aa)	-	Q1L876

Gene Model

Click here to download ENSDARG00000032516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000032516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000032516	rrp36	71	48.696	ENSG00000124541	RRP36	89	48.696	Homo_sapiens
ENSDARG00000032516	rrp36	65	64.904	ENSAPOG00000022015	rrp36	95	53.722	Acanthochromis_polyacanthus
ENSDARG00000032516	rrp36	94	54.636	ENSACIG00000020578	-	78	56.612	Amphilophus_citrinellus
ENSDARG00000032516	rrp36	70	64.732	ENSAOCG00000013439	rrp36	75	62.449	Amphiprion_ocellaris
ENSDARG00000032516	rrp36	70	64.732	ENSAPEG00000020996	rrp36	75	62.449	Amphiprion_percula
ENSDARG00000032516	rrp36	68	65.438	ENSATEG00000016946	rrp36	69	63.291	Anabas_testudineus
ENSDARG00000032516	rrp36	71	48.276	ENSANAG00000021773	RRP36	91	48.276	Aotus_nancymaae
ENSDARG00000032516	rrp36	65	55.288	ENSACLG00000013982	RRP36	85	52.885	Astatotilapia_calliptera
ENSDARG00000032516	rrp36	66	60.849	ENSACLG00000008408	rrp36	89	60.849	Astatotilapia_calliptera
ENSDARG00000032516	rrp36	72	47.660	ENSBTAG00000053873	RRP36	93	47.660	Bos_taurus
ENSDARG00000032516	rrp36	71	47.414	ENSCJAG00000004943	RRP36	91	47.414	Callithrix_jacchus
ENSDARG00000032516	rrp36	67	50.691	ENSCAFG00020011057	RRP36	90	51.429	Canis_lupus_dingo
ENSDARG00000032516	rrp36	60	48.731	ENSCHIG00000003210	-	88	48.731	Capra_hircus
ENSDARG00000032516	rrp36	67	38.991	ENSCHIG00000019781	-	88	38.532	Capra_hircus
ENSDARG00000032516	rrp36	64	50.476	ENSCHIG00000016354	-	83	50.476	Capra_hircus
ENSDARG00000032516	rrp36	66	50.926	ENSTSYG00000037176	RRP36	85	50.926	Carlito_syrichta
ENSDARG00000032516	rrp36	64	49.038	ENSCAPG00000010983	RRP36	89	49.038	Cavia_aperea
ENSDARG00000032516	rrp36	67	47.907	ENSCPOG00000025932	RRP36	96	47.907	Cavia_porcellus
ENSDARG00000032516	rrp36	71	47.845	ENSCCAG00000000048	RRP36	91	47.845	Cebus_capucinus
ENSDARG00000032516	rrp36	64	52.381	ENSCATG00000041903	RRP36	82	52.381	Cercocebus_atys
ENSDARG00000032516	rrp36	67	49.321	ENSCLAG00000013166	RRP36	98	49.321	Chinchilla_lanigera
ENSDARG00000032516	rrp36	64	52.381	ENSCSAG00000011553	RRP36	94	46.694	Chlorocebus_sabaeus
ENSDARG00000032516	rrp36	80	48.571	ENSCPBG00000003555	RRP36	61	55.310	Chrysemys_picta_bellii
ENSDARG00000032516	rrp36	63	40.187	ENSCING00000012193	-	80	40.976	Ciona_intestinalis
ENSDARG00000032516	rrp36	53	41.618	ENSCSAVG00000002672	-	89	39.604	Ciona_savignyi
ENSDARG00000032516	rrp36	64	52.381	ENSCANG00000035127	RRP36	83	52.381	Colobus_angolensis_palliatus
ENSDARG00000032516	rrp36	64	51.691	ENSCGRG00001021461	Rrp36	92	51.691	Cricetulus_griseus_chok1gshd
ENSDARG00000032516	rrp36	64	51.691	ENSCGRG00000006286	Rrp36	92	51.691	Cricetulus_griseus_crigri
ENSDARG00000032516	rrp36	71	64.912	ENSCSEG00000001039	RRP36	93	54.605	Cynoglossus_semilaevis
ENSDARG00000032516	rrp36	65	54.762	ENSCVAG00000017798	rrp36	92	54.762	Cyprinodon_variegatus
ENSDARG00000032516	rrp36	65	51.429	ENSDORG00000012186	Rrp36	91	50.481	Dipodomys_ordii
ENSDARG00000032516	rrp36	66	34.685	FBgn0038235	CG8461	98	33.333	Drosophila_melanogaster
ENSDARG00000032516	rrp36	70	49.561	ENSEASG00005003169	RRP36	92	51.905	Equus_asinus_asinus
ENSDARG00000032516	rrp36	70	49.561	ENSECAG00000040238	RRP36	92	51.905	Equus_caballus
ENSDARG00000032516	rrp36	66	41.667	ENSEEUG00000010515	RRP36	87	41.667	Erinaceus_europaeus
ENSDARG00000032516	rrp36	94	55.864	ENSELUG00000016840	rrp36	87	59.223	Esox_lucius
ENSDARG00000032516	rrp36	77	47.600	ENSFCAG00000043818	RRP36	86	51.613	Felis_catus
ENSDARG00000032516	rrp36	65	49.057	ENSFDAG00000010380	RRP36	98	49.057	Fukomys_damarensis
ENSDARG00000032516	rrp36	51	62.195	ENSFHEG00000000761	rrp36	83	62.195	Fundulus_heteroclitus
ENSDARG00000032516	rrp36	69	61.504	ENSGAFG00000017817	rrp36	68	59.259	Gambusia_affinis
ENSDARG00000032516	rrp36	74	63.598	ENSGACG00000019603	RRP36	72	64.135	Gasterosteus_aculeatus
ENSDARG00000032516	rrp36	80	48.929	ENSGAGG00000019161	RRP36	51	55.310	Gopherus_agassizii
ENSDARG00000032516	rrp36	71	48.696	ENSGGOG00000037384	RRP36	91	48.696	Gorilla_gorilla
ENSDARG00000032516	rrp36	88	52.843	ENSHBUG00000008974	RRP36	97	49.691	Haplochromis_burtoni
ENSDARG00000032516	rrp36	65	48.585	ENSHGLG00000018082	RRP36	83	48.585	Heterocephalus_glaber_female
ENSDARG00000032516	rrp36	65	48.585	ENSHGLG00100019303	RRP36	83	48.585	Heterocephalus_glaber_male
ENSDARG00000032516	rrp36	66	39.623	ENSHCOG00000010303	rrp36	82	41.038	Hippocampus_comes
ENSDARG00000032516	rrp36	88	58.156	ENSIPUG00000016548	rrp36	88	57.092	Ictalurus_punctatus
ENSDARG00000032516	rrp36	68	49.780	ENSSTOG00000009511	RRP36	97	49.780	Ictidomys_tridecemlineatus
ENSDARG00000032516	rrp36	64	55.122	ENSJJAG00000023363	Rrp36	92	55.072	Jaculus_jaculus
ENSDARG00000032516	rrp36	88	53.055	ENSKMAG00000006968	rrp36	69	61.088	Kryptolebias_marmoratus
ENSDARG00000032516	rrp36	66	59.504	ENSLBEG00000017728	-	74	56.044	Labrus_bergylta
ENSDARG00000032516	rrp36	88	52.982	ENSLACG00000001888	rrp36	76	57.959	Latimeria_chalumnae
ENSDARG00000032516	rrp36	93	54.259	ENSLOCG00000015862	RRP36	72	60.159	Lepisosteus_oculatus
ENSDARG00000032516	rrp36	64	51.905	ENSLAFG00000032704	RRP36	98	51.905	Loxodonta_africana
ENSDARG00000032516	rrp36	64	52.381	ENSMFAG00000003547	RRP36	89	48.696	Macaca_fascicularis
ENSDARG00000032516	rrp36	64	51.905	ENSMNEG00000044747	RRP36	89	48.261	Macaca_nemestrina
ENSDARG00000032516	rrp36	64	52.381	ENSMLEG00000034272	RRP36	89	48.696	Mandrillus_leucophaeus
ENSDARG00000032516	rrp36	71	60.163	ENSMAMG00000019157	-	69	59.684	Mastacembelus_armatus
ENSDARG00000032516	rrp36	88	53.177	ENSMZEG00005015204	RRP36	88	52.577	Maylandia_zebra
ENSDARG00000032516	rrp36	68	50.230	ENSMAUG00000003648	Rrp36	97	50.230	Mesocricetus_auratus
ENSDARG00000032516	rrp36	67	47.032	ENSMICG00000045230	RRP36	85	47.685	Microcebus_murinus
ENSDARG00000032516	rrp36	70	48.879	ENSMOCG00000002009	Rrp36	93	48.879	Microtus_ochrogaster
ENSDARG00000032516	rrp36	76	60.246	ENSMMOG00000018637	-	75	57.600	Mola_mola
ENSDARG00000032516	rrp36	70	62.222	ENSMALG00000008142	-	77	58.678	Monopterus_albus
ENSDARG00000032516	rrp36	81	44.061	MGP_CAROLIEiJ_G0021680	Rrp36	88	50.000	Mus_caroli
ENSDARG00000032516	rrp36	72	46.639	ENSMUSG00000023971	Rrp36	98	48.198	Mus_musculus
ENSDARG00000032516	rrp36	64	51.923	MGP_PahariEiJ_G0020671	Rrp36	98	49.558	Mus_pahari
ENSDARG00000032516	rrp36	81	43.511	MGP_SPRETEiJ_G0022592	Rrp36	96	47.059	Mus_spretus
ENSDARG00000032516	rrp36	64	51.905	ENSNLEG00000033289	RRP36	98	51.905	Nomascus_leucogenys
ENSDARG00000032516	rrp36	50	50.625	ENSMEUG00000007149	-	96	50.625	Notamacropus_eugenii
ENSDARG00000032516	rrp36	59	52.041	ENSOPRG00000002274	RRP36	79	51.031	Ochotona_princeps
ENSDARG00000032516	rrp36	68	48.261	ENSODEG00000015915	RRP36	99	48.261	Octodon_degus
ENSDARG00000032516	rrp36	98	52.681	ENSONIG00000015983	rrp36	89	57.042	Oreochromis_niloticus
ENSDARG00000032516	rrp36	66	65.258	ENSORLG00000029500	rrp36	70	60.251	Oryzias_latipes
ENSDARG00000032516	rrp36	66	64.019	ENSORLG00020017452	-	70	59.583	Oryzias_latipes_hni
ENSDARG00000032516	rrp36	66	65.094	ENSORLG00015016898	rrp36	70	61.603	Oryzias_latipes_hsok
ENSDARG00000032516	rrp36	70	61.883	ENSOMEG00000008623	RRP36	70	61.803	Oryzias_melastigma
ENSDARG00000032516	rrp36	66	47.685	ENSOGAG00000012699	RRP36	94	47.685	Otolemur_garnettii
ENSDARG00000032516	rrp36	64	44.762	ENSPPAG00000042831	-	83	45.238	Pan_paniscus
ENSDARG00000032516	rrp36	67	51.152	ENSPPRG00000014610	RRP36	86	51.152	Panthera_pardus
ENSDARG00000032516	rrp36	67	51.152	ENSPTIG00000010853	RRP36	86	51.152	Panthera_tigris_altaica
ENSDARG00000032516	rrp36	71	48.696	ENSPTRG00000018184	RRP36	89	48.696	Pan_troglodytes
ENSDARG00000032516	rrp36	64	52.381	ENSPANG00000025140	RRP36	89	48.696	Papio_anubis
ENSDARG00000032516	rrp36	92	56.818	ENSPKIG00000004303	rrp36	71	63.900	Paramormyrops_kingsleyae
ENSDARG00000032516	rrp36	66	56.190	ENSPMGG00000016870	rrp36	76	52.675	Periophthalmus_magnuspinnatus
ENSDARG00000032516	rrp36	69	50.679	ENSPEMG00000007015	Rrp36	98	50.679	Peromyscus_maniculatus_bairdii
ENSDARG00000032516	rrp36	74	48.560	ENSPCIG00000009179	RRP36	95	49.367	Phascolarctos_cinereus
ENSDARG00000032516	rrp36	72	60.345	ENSPFOG00000011959	rrp36	61	59.583	Poecilia_formosa
ENSDARG00000032516	rrp36	72	60.345	ENSPLAG00000023901	rrp36	68	58.921	Poecilia_latipinna
ENSDARG00000032516	rrp36	72	59.914	ENSPMEG00000024099	rrp36	67	58.921	Poecilia_mexicana
ENSDARG00000032516	rrp36	72	58.621	ENSPREG00000022787	rrp36	68	57.261	Poecilia_reticulata
ENSDARG00000032516	rrp36	64	51.905	ENSPPYG00000016628	RRP36	81	51.905	Pongo_abelii
ENSDARG00000032516	rrp36	66	46.759	ENSPCOG00000018401	RRP36	86	46.759	Propithecus_coquereli
ENSDARG00000032516	rrp36	67	49.309	ENSPVAG00000008714	RRP36	88	49.309	Pteropus_vampyrus
ENSDARG00000032516	rrp36	88	53.512	ENSPNYG00000018030	RRP36	97	50.309	Pundamilia_nyererei
ENSDARG00000032516	rrp36	99	60.486	ENSPNAG00000027207	rrp36	92	57.692	Pygocentrus_nattereri
ENSDARG00000032516	rrp36	81	44.656	ENSRNOG00000017836	Rrp36	86	51.185	Rattus_norvegicus
ENSDARG00000032516	rrp36	64	52.381	ENSRBIG00000040019	RRP36	82	52.381	Rhinopithecus_bieti
ENSDARG00000032516	rrp36	64	51.905	ENSRROG00000040721	RRP36	82	51.905	Rhinopithecus_roxellana
ENSDARG00000032516	rrp36	71	48.276	ENSSBOG00000030228	RRP36	93	48.276	Saimiri_boliviensis_boliviensis
ENSDARG00000032516	rrp36	91	54.286	ENSSFOG00015023058	rrp36	72	61.826	Scleropages_formosus
ENSDARG00000032516	rrp36	66	64.789	ENSSMAG00000020911	-	65	60.669	Scophthalmus_maximus
ENSDARG00000032516	rrp36	72	65.652	ENSSDUG00000018924	rrp36	90	52.454	Seriola_dumerili
ENSDARG00000032516	rrp36	64	68.293	ENSSLDG00000019741	RRP36	96	68.293	Seriola_lalandi_dorsalis
ENSDARG00000032516	rrp36	64	51.442	ENSSARG00000000873	RRP36	97	51.442	Sorex_araneus
ENSDARG00000032516	rrp36	67	60.731	ENSSPUG00000000213	RRP36	66	58.264	Sphenodon_punctatus
ENSDARG00000032516	rrp36	65	67.773	ENSSPAG00000017154	rrp36	79	60.392	Stegastes_partitus
ENSDARG00000032516	rrp36	67	49.770	ENSSSCG00000001656	RRP36	87	49.770	Sus_scrofa
ENSDARG00000032516	rrp36	62	41.089	ENSSSCG00000037862	-	88	39.706	Sus_scrofa
ENSDARG00000032516	rrp36	93	51.475	ENSTRUG00000021893	rrp36	72	57.917	Takifugu_rubripes
ENSDARG00000032516	rrp36	71	56.957	ENSTNIG00000004741	rrp36	88	55.983	Tetraodon_nigroviridis
ENSDARG00000032516	rrp36	64	45.714	ENSTBEG00000012326	RRP36	98	45.714	Tupaia_belangeri
ENSDARG00000032516	rrp36	65	50.704	ENSTTRG00000007001	RRP36	88	50.230	Tursiops_truncatus
ENSDARG00000032516	rrp36	67	48.387	ENSUAMG00000015865	RRP36	88	48.387	Ursus_americanus
ENSDARG00000032516	rrp36	50	54.088	ENSUMAG00000008726	RRP36	98	54.088	Ursus_maritimus
ENSDARG00000032516	rrp36	64	51.905	ENSVPAG00000008904	RRP36	98	51.905	Vicugna_pacos
ENSDARG00000032516	rrp36	67	50.691	ENSVVUG00000027816	RRP36	90	51.429	Vulpes_vulpes
ENSDARG00000032516	rrp36	72	59.740	ENSXCOG00000011238	rrp36	91	50.472	Xiphophorus_couchianus
ENSDARG00000032516	rrp36	72	59.565	ENSXMAG00000013804	rrp36	51	58.065	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000469	cleavage involved in rRNA processing	-	IEA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0030686	90S preribosome	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process