EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000032614 (Gene tree)
Gene ID
394084
Gene Symbol
msi2b
Alias
zgc:174035|zgc:63812
Full Name
musashi RNA-binding protein 2b
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
408253 bases
Position
chr15:30424645-30832897
Accession
ZDB-GENE-040426-1268
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000126866RRM_1PF00076.221.1e-3412
ENSDARP00000126866RRM_1PF00076.221.1e-3422
ENSDARP00000050648RRM_1PF00076.224.2e-3412
ENSDARP00000050648RRM_1PF00076.224.2e-3422
ENSDARP00000090967RRM_1PF00076.221e-3312
ENSDARP00000090967RRM_1PF00076.221e-3322
ENSDARP00000129111RRM_1PF00076.221.3e-2612
ENSDARP00000129111RRM_1PF00076.221.3e-2622
ENSDARP00000123620RRM_1PF00076.221.3e-2212
ENSDARP00000123620RRM_1PF00076.221.3e-2222
ENSDARP00000126843RRM_1PF00076.225.6e-1512
ENSDARP00000126843RRM_1PF00076.225.6e-1522
ENSDARP00000129590RRM_1PF00076.221.6e-1411
ENSDARP00000126581RRM_1PF00076.221.9e-1312
ENSDARP00000126581RRM_1PF00076.221.9e-1322
ENSDARP00000127772RRM_1PF00076.222.5e-1211
ENSDARP00000121426RRM_1PF00076.221.7e-0611
ENSDARP00000115537RRM_1PF00076.221.5e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000156914-506-ENSDARP00000127772169 (aa)-X1WC29
ENSDART00000100194-2981XM_005157680ENSDARP00000090967408 (aa)XP_005157737Q7SXT6
ENSDART00000156160-768-ENSDARP00000129111222 (aa)-X1WFV6
ENSDART00000154714-731-ENSDARP00000129590244 (aa)-X1WH79
ENSDART00000136901-1107-ENSDARP0000012142641 (aa)-E9QBI2
ENSDART00000145918-728-ENSDARP00000123620192 (aa)-E9QBG1
ENSDART00000152414-749-ENSDARP00000126866200 (aa)-R4GEF3
ENSDART00000152330-608-ENSDARP00000126843101 (aa)-R4GED0
ENSDART00000142827-751--- (aa)--
ENSDART00000152790-520-ENSDARP0000012658194 (aa)-R4GDM8
ENSDART00000142982-434-ENSDARP0000011553728 (aa)-E9QG37
ENSDART00000156584-617-ENSDARP0000012907190 (aa)-X1WFR6
ENSDART00000155212-1297-ENSDARP00000128256211 (aa)-X1WDF7
ENSDART00000154311-804--- (aa)--
ENSDART00000050649-914XM_005157686ENSDARP00000050648304 (aa)XP_005157743E9QHJ7
Gene Model
Click here to download ENSDARG00000032614's gene model file
Pathways
Pathway IDPathway NameSource
dre03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000032614's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000032614msi2b10090.164ENSDARG00000010710msi19580.734
ENSDARG00000032614msi2b5530.435ENSDARG00000001241puf60b5430.159
ENSDARG00000032614msi2b10078.571ENSDARG00000041299zgc:1107969868.478
ENSDARG00000032614msi2b10048.780ENSDARG00000070846dazap19248.780
ENSDARG00000032614msi2b9634.444ENSDARG00000004452tardbpl5533.333
ENSDARG00000032614msi2b9952.239ENSDARG00000007960hnrnpaba7556.701
ENSDARG00000032614msi2b9648.780ENSDARG00000099865hnrnpabb7841.333
ENSDARG00000032614msi2b10096.354ENSDARG00000033901msi2a10084.804
ENSDARG00000032614msi2b9365.385ENSDARG00000059351hnrnpa39136.782
ENSDARG00000032614msi2b10034.951ENSDARG00000036162hnrnpa0b9532.927
ENSDARG00000032614msi2b10038.835ENSDARG00000036161hnrnpa0l8135.429
ENSDARG00000032614msi2b9651.220ENSDARG00000059246hnrnpd7545.122
ENSDARG00000032614msi2b7546.479ENSDARG00000103672cirbpa8447.297
ENSDARG00000032614msi2b8432.099ENSDARG00000036386rbm4.17332.099
ENSDARG00000032614msi2b9666.667ENSDARG00000003429hnrnpdl9434.694
ENSDARG00000032614msi2b8140.698ENSDARG00000031809rbm24b6341.270
ENSDARG00000032614msi2b8246.479ENSDARG00000013351cirbpb5447.297
ENSDARG00000032614msi2b10034.951ENSDARG00000089302hnrnpa0a6340.437
ENSDARG00000032614msi2b8141.860ENSDARG00000102995rbm24a7841.860
ENSDARG00000032614msi2b8581.081ENSDARG00000102015CABZ01037298.18569.784
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000032614msi2b100100.000ENSG00000153944MSI29395.714Homo_sapiens
ENSDARG00000032614msi2b10097.030ENSAPOG00000001658msi2a10097.119Acanthochromis_polyacanthus
ENSDARG00000032614msi2b10098.020ENSAMEG00000002697MSI29289.369Ailuropoda_melanoleuca
ENSDARG00000032614msi2b10097.030ENSACIG00000009475msi2a10083.495Amphilophus_citrinellus
ENSDARG00000032614msi2b10096.429ENSAOCG00000014822msi2a6487.156Amphiprion_ocellaris
ENSDARG00000032614msi2b10097.030ENSAPEG00000007706msi2a9791.235Amphiprion_percula
ENSDARG00000032614msi2b10097.396ENSATEG00000003301-9797.512Anabas_testudineus
ENSDARG00000032614msi2b10097.030ENSATEG00000010498msi2a10097.119Anabas_testudineus
ENSDARG00000032614msi2b10098.901ENSACAG00000005452MSI28877.540Anolis_carolinensis
ENSDARG00000032614msi2b100100.000ENSANAG00000037827MSI29295.588Aotus_nancymaae
ENSDARG00000032614msi2b10097.030ENSACLG00000007752msi2a10096.708Astatotilapia_calliptera
ENSDARG00000032614msi2b100100.000ENSAMXG00000010474msi2b10093.873Astyanax_mexicanus
ENSDARG00000032614msi2b100100.000ENSAMXG00000032796msi2a10099.203Astyanax_mexicanus
ENSDARG00000032614msi2b10098.020ENSBTAG00000004406MSI28994.700Bos_taurus
ENSDARG00000032614msi2b10078.571WBGene00003423msi-16772.277Caenorhabditis_elegans
ENSDARG00000032614msi2b10098.020ENSCJAG00000013998MSI29295.588Callithrix_jacchus
ENSDARG00000032614msi2b10098.020ENSCAFG00020025620MSI27196.875Canis_lupus_dingo
ENSDARG00000032614msi2b10098.020ENSCHIG00000016580MSI29292.434Capra_hircus
ENSDARG00000032614msi2b10092.188ENSCPOG00000034042MSI29189.535Cavia_porcellus
ENSDARG00000032614msi2b100100.000ENSCCAG00000033927MSI29295.588Cebus_capucinus
ENSDARG00000032614msi2b10098.020ENSCATG00000040879MSI29295.588Cercocebus_atys
ENSDARG00000032614msi2b10098.020ENSCLAG00000014325MSI29388.820Chinchilla_lanigera
ENSDARG00000032614msi2b10098.020ENSCSAG00000005633MSI29294.079Chlorocebus_sabaeus
ENSDARG00000032614msi2b9879.121ENSCHOG00000008660MSI28388.235Choloepus_hoffmanni
ENSDARG00000032614msi2b10098.889ENSCPBG00000009942MSI28997.790Chrysemys_picta_bellii
ENSDARG00000032614msi2b10085.106ENSCING00000018579-8556.410Ciona_intestinalis
ENSDARG00000032614msi2b10070.000ENSCSAVG00000010397-6674.766Ciona_savignyi
ENSDARG00000032614msi2b10098.020ENSCANG00000036414MSI29295.588Colobus_angolensis_palliatus
ENSDARG00000032614msi2b10098.020ENSCGRG00001013330Msi29293.443Cricetulus_griseus_chok1gshd
ENSDARG00000032614msi2b10098.020ENSCGRG00000003141Msi29289.073Cricetulus_griseus_crigri
ENSDARG00000032614msi2b10093.023ENSCSEG00000003266-9683.267Cynoglossus_semilaevis
ENSDARG00000032614msi2b8581.481ENSCSEG00000013557msi2a7984.615Cynoglossus_semilaevis
ENSDARG00000032614msi2b10094.186ENSCSEG00000013549msi2a10076.630Cynoglossus_semilaevis
ENSDARG00000032614msi2b10097.030ENSCVAG00000017075msi2a10097.119Cyprinodon_variegatus
ENSDARG00000032614msi2b10098.020ENSDNOG00000014501MSI29194.697Dasypus_novemcinctus
ENSDARG00000032614msi2b10097.647ENSDORG00000028440-10098.230Dipodomys_ordii
ENSDARG00000032614msi2b7298.795ENSDORG00000005394Msi27990.769Dipodomys_ordii
ENSDARG00000032614msi2b10085.106FBgn0260943Rbp68866.667Drosophila_melanogaster
ENSDARG00000032614msi2b8395.833ENSETEG00000012450-6474.342Echinops_telfairi
ENSDARG00000032614msi2b9892.500ENSEBUG00000006732msi2a7580.476Eptatretus_burgeri
ENSDARG00000032614msi2b10098.020ENSEASG00005002965MSI29775.696Equus_asinus_asinus
ENSDARG00000032614msi2b10098.020ENSECAG00000011435MSI29386.364Equus_caballus
ENSDARG00000032614msi2b9892.857ENSEEUG00000007810MSI29679.894Erinaceus_europaeus
ENSDARG00000032614msi2b100100.000ENSELUG00000011747msi2a9793.625Esox_lucius
ENSDARG00000032614msi2b10099.010ENSELUG00000001361msi2b10088.193Esox_lucius
ENSDARG00000032614msi2b10085.106ENSFCAG00000033787-8276.923Felis_catus
ENSDARG00000032614msi2b10098.020ENSFCAG00000041686MSI29692.308Felis_catus
ENSDARG00000032614msi2b10098.020ENSFDAG00000016118MSI29289.369Fukomys_damarensis
ENSDARG00000032614msi2b10097.030ENSFHEG00000000084msi2a9697.351Fundulus_heteroclitus
ENSDARG00000032614msi2b10096.429ENSGMOG00000007596-10096.154Gadus_morhua
ENSDARG00000032614msi2b10098.020ENSGALG00000005567MSI29388.509Gallus_gallus
ENSDARG00000032614msi2b10097.030ENSGAFG00000006974msi2a9097.351Gambusia_affinis
ENSDARG00000032614msi2b10099.010ENSGAGG00000016542MSI210079.487Gopherus_agassizii
ENSDARG00000032614msi2b10098.020ENSGGOG00000013182MSI29295.588Gorilla_gorilla
ENSDARG00000032614msi2b10097.030ENSHBUG00000020800msi2a10096.708Haplochromis_burtoni
ENSDARG00000032614msi2b10096.429ENSHGLG00000012444MSI29279.193Heterocephalus_glaber_female
ENSDARG00000032614msi2b10096.552ENSHGLG00100004028-8897.391Heterocephalus_glaber_male
ENSDARG00000032614msi2b8396.117ENSHGLG00100003744MSI28883.607Heterocephalus_glaber_male
ENSDARG00000032614msi2b10096.354ENSHCOG00000000266msi2a10092.402Hippocampus_comes
ENSDARG00000032614msi2b10092.857ENSHCOG00000017241-9872.953Hippocampus_comes
ENSDARG00000032614msi2b100100.000ENSIPUG00000021097msi2a10097.942Ictalurus_punctatus
ENSDARG00000032614msi2b100100.000ENSIPUG00000003732msi2b10093.137Ictalurus_punctatus
ENSDARG00000032614msi2b10092.188ENSSTOG00000007884MSI29189.535Ictidomys_tridecemlineatus
ENSDARG00000032614msi2b10097.647ENSJJAG00000009467-10098.230Jaculus_jaculus
ENSDARG00000032614msi2b8396.117ENSJJAG00000006292-8779.310Jaculus_jaculus
ENSDARG00000032614msi2b10096.429ENSKMAG00000009494msi2a9396.813Kryptolebias_marmoratus
ENSDARG00000032614msi2b10097.647ENSLBEG00000007061msi2a10093.627Labrus_bergylta
ENSDARG00000032614msi2b9989.062ENSLBEG00000026223-10073.757Labrus_bergylta
ENSDARG00000032614msi2b10098.148ENSLACG00000016798MSI29895.604Latimeria_chalumnae
ENSDARG00000032614msi2b100100.000ENSLOCG00000004675msi2b10092.157Lepisosteus_oculatus
ENSDARG00000032614msi2b10098.020ENSMFAG00000003775MSI29295.588Macaca_fascicularis
ENSDARG00000032614msi2b10098.020ENSMMUG00000002069MSI29295.588Macaca_mulatta
ENSDARG00000032614msi2b10098.020ENSMNEG00000045275MSI29295.588Macaca_nemestrina
ENSDARG00000032614msi2b10098.020ENSMLEG00000033888MSI29295.588Mandrillus_leucophaeus
ENSDARG00000032614msi2b10097.396ENSMAMG00000002488-9996.689Mastacembelus_armatus
ENSDARG00000032614msi2b10097.030ENSMAMG00000010503msi2a10097.119Mastacembelus_armatus
ENSDARG00000032614msi2b10097.030ENSMZEG00005007676msi2a9796.813Maylandia_zebra
ENSDARG00000032614msi2b10098.020ENSMAUG00000003862Msi29388.235Mesocricetus_auratus
ENSDARG00000032614msi2b10084.158ENSMICG00000032913-9388.333Microcebus_murinus
ENSDARG00000032614msi2b10098.020ENSMICG00000013598-9295.588Microcebus_murinus
ENSDARG00000032614msi2b10098.020ENSMOCG00000005820Msi29388.509Microtus_ochrogaster
ENSDARG00000032614msi2b10097.030ENSMMOG00000008348msi2a8496.380Mola_mola
ENSDARG00000032614msi2b8397.087ENSMODG00000014790MSI28883.607Monodelphis_domestica
ENSDARG00000032614msi2b10097.211ENSMALG00000000071msi2a10097.119Monopterus_albus
ENSDARG00000032614msi2b10098.020MGP_CAROLIEiJ_G0016948Msi210098.230Mus_caroli
ENSDARG00000032614msi2b10098.020ENSMUSG00000069769Msi210098.230Mus_musculus
ENSDARG00000032614msi2b10098.020MGP_PahariEiJ_G0018079Msi210098.230Mus_pahari
ENSDARG00000032614msi2b10098.020MGP_SPRETEiJ_G0017795Msi210098.230Mus_spretus
ENSDARG00000032614msi2b10098.020ENSMPUG00000015377MSI28995.053Mustela_putorius_furo
ENSDARG00000032614msi2b10098.020ENSMLUG00000007865MSI28994.700Myotis_lucifugus
ENSDARG00000032614msi2b10098.020ENSNGAG00000017807Msi29388.509Nannospalax_galili
ENSDARG00000032614msi2b10097.030ENSNBRG00000014596msi2a9297.368Neolamprologus_brichardi
ENSDARG00000032614msi2b10098.020ENSNLEG00000008059MSI29596.172Nomascus_leucogenys
ENSDARG00000032614msi2b99100.000ENSOPRG00000000872-6486.184Ochotona_princeps
ENSDARG00000032614msi2b10098.020ENSODEG00000011974MSI29388.820Octodon_degus
ENSDARG00000032614msi2b10097.030ENSONIG00000001972msi2a8497.351Oreochromis_niloticus
ENSDARG00000032614msi2b10099.010ENSOANG00000005667MSI29979.953Ornithorhynchus_anatinus
ENSDARG00000032614msi2b10098.020ENSOCUG00000010440MSI28995.053Oryctolagus_cuniculus
ENSDARG00000032614msi2b10097.030ENSORLG00000009671msi2a9597.119Oryzias_latipes
ENSDARG00000032614msi2b10097.030ENSORLG00020021556msi2a10097.119Oryzias_latipes_hni
ENSDARG00000032614msi2b10097.030ENSORLG00015004592msi2a9597.119Oryzias_latipes_hsok
ENSDARG00000032614msi2b10097.030ENSOMEG00000000146msi2a10097.119Oryzias_melastigma
ENSDARG00000032614msi2b10096.429ENSOGAG00000005621MSI29790.870Otolemur_garnettii
ENSDARG00000032614msi2b10098.020ENSPPAG00000037697MSI29295.588Pan_paniscus
ENSDARG00000032614msi2b10098.020ENSPPRG00000001848MSI29295.588Panthera_pardus
ENSDARG00000032614msi2b10087.059ENSPTIG00000021873-9077.637Panthera_tigris_altaica
ENSDARG00000032614msi2b10098.020ENSPTIG00000021678MSI28396.172Panthera_tigris_altaica
ENSDARG00000032614msi2b10098.020ENSPTRG00000009437MSI29295.588Pan_troglodytes
ENSDARG00000032614msi2b10098.020ENSPANG00000022319MSI29295.588Papio_anubis
ENSDARG00000032614msi2b100100.000ENSPKIG00000007038-9694.650Paramormyrops_kingsleyae
ENSDARG00000032614msi2b100100.000ENSPKIG00000017107-8198.901Paramormyrops_kingsleyae
ENSDARG00000032614msi2b10099.010ENSPSIG00000008618MSI210083.099Pelodiscus_sinensis
ENSDARG00000032614msi2b10097.030ENSPMGG00000005888msi2a9790.837Periophthalmus_magnuspinnatus
ENSDARG00000032614msi2b10097.647ENSPEMG00000021793-10098.230Peromyscus_maniculatus_bairdii
ENSDARG00000032614msi2b10099.010ENSPCIG00000006063MSI29387.576Phascolarctos_cinereus
ENSDARG00000032614msi2b10096.429ENSPFOG00000019337MSI29296.190Poecilia_formosa
ENSDARG00000032614msi2b10096.429ENSPLAG00000000436msi2a7694.366Poecilia_latipinna
ENSDARG00000032614msi2b10096.429ENSPMEG00000013247msi2a8083.217Poecilia_mexicana
ENSDARG00000032614msi2b10097.030ENSPREG00000000881msi2a10093.382Poecilia_reticulata
ENSDARG00000032614msi2b100100.000ENSPPYG00000008244-8990.654Pongo_abelii
ENSDARG00000032614msi2b8859.763ENSPCAG00000010552MSI29686.765Procavia_capensis
ENSDARG00000032614msi2b10098.020ENSPCOG00000019195-9398.462Propithecus_coquereli
ENSDARG00000032614msi2b10098.020ENSPVAG00000017053MSI29786.574Pteropus_vampyrus
ENSDARG00000032614msi2b10097.030ENSPNYG00000018393msi2a10096.708Pundamilia_nyererei
ENSDARG00000032614msi2b100100.000ENSPNAG00000014957msi2a10098.805Pygocentrus_nattereri
ENSDARG00000032614msi2b100100.000ENSPNAG00000000844msi2b10094.608Pygocentrus_nattereri
ENSDARG00000032614msi2b10098.020ENSRNOG00000025338Msi29194.488Rattus_norvegicus
ENSDARG00000032614msi2b10096.429ENSRBIG00000032064-7294.545Rhinopithecus_bieti
ENSDARG00000032614msi2b10097.647ENSRROG00000034421-9298.246Rhinopithecus_roxellana
ENSDARG00000032614msi2b100100.000ENSSBOG00000026425MSI29295.588Saimiri_boliviensis_boliviensis
ENSDARG00000032614msi2b10099.010ENSSHAG00000008672MSI29289.667Sarcophilus_harrisii
ENSDARG00000032614msi2b10098.020ENSSFOG00015021687-9794.595Scleropages_formosus
ENSDARG00000032614msi2b98100.000ENSSFOG00015012168msi2b10069.860Scleropages_formosus
ENSDARG00000032614msi2b10097.030ENSSMAG00000018484msi2a10097.119Scophthalmus_maximus
ENSDARG00000032614msi2b100100.000ENSSDUG00000021968-9996.026Seriola_dumerili
ENSDARG00000032614msi2b10097.647ENSSDUG00000014507msi2a10097.119Seriola_dumerili
ENSDARG00000032614msi2b100100.000ENSSLDG00000021332-6882.418Seriola_lalandi_dorsalis
ENSDARG00000032614msi2b10097.030ENSSLDG00000017172msi2a10093.627Seriola_lalandi_dorsalis
ENSDARG00000032614msi2b10099.010ENSSPUG00000000913-9495.570Sphenodon_punctatus
ENSDARG00000032614msi2b10097.030ENSSPAG00000017793msi2a10093.627Stegastes_partitus
ENSDARG00000032614msi2b10098.020ENSSSCG00000038505MSI29695.885Sus_scrofa
ENSDARG00000032614msi2b8397.087ENSTGUG00000008452MSI28883.607Taeniopygia_guttata
ENSDARG00000032614msi2b10097.030ENSTRUG00000021248msi2a9592.893Takifugu_rubripes
ENSDARG00000032614msi2b10082.292ENSTBEG00000001241MSI27379.339Tupaia_belangeri
ENSDARG00000032614msi2b100100.000ENSTTRG00000002189MSI29197.368Tursiops_truncatus
ENSDARG00000032614msi2b10098.020ENSUAMG00000000700MSI29697.297Ursus_americanus
ENSDARG00000032614msi2b10098.020ENSUMAG00000000505MSI29596.891Ursus_maritimus
ENSDARG00000032614msi2b10098.020ENSVPAG00000006837-6283.516Vicugna_pacos
ENSDARG00000032614msi2b10098.020ENSVVUG00000011783MSI29794.470Vulpes_vulpes
ENSDARG00000032614msi2b10097.030ENSXCOG00000006113msi2a10087.500Xiphophorus_couchianus
ENSDARG00000032614msi2b10097.030ENSXMAG00000000608msi2a10097.119Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding-IEAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005844polysome21873635.IBAComponent
GO:0021772olfactory bulb development24420905.IMPProcess
GO:1990904ribonucleoprotein complex21873635.IBAComponent

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