EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000032876 (Gene tree)
Gene ID: 553523
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 77316 bases
Position: chr19:30722767-30800082
Accession: ZDB-GENE-060503-297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000110903	IPPT	PF01715.17	6.2e-64	1	1
ENSDARP00000045503	IPPT	PF01715.17	9.5e-64	1	1
ENSDARP00000104694	IPPT	PF01715.17	9.5e-64	1	1
ENSDARP00000045503	zf-C2H2_jaz	PF12171.8	6e-05	1	1
ENSDARP00000104694	zf-C2H2_jaz	PF12171.8	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000125893	-	1395	XM_021468061	ENSDARP00000110903	330 (aa)	XP_021323736	A4IGE5
ENSDART00000145581	-	780	-	-	- (aa)	-	-
ENSDART00000128560	-	2233	XM_021468060	ENSDARP00000104694	447 (aa)	XP_021323735	Q1LWL7
ENSDART00000045504	-	2233	-	ENSDARP00000045503	447 (aa)	-	Q1LWL7

Gene Model

Click here to download ENSDARG00000032876's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000032876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000032876	trit1	99	61.934	ENSG00000043514	TRIT1	98	58.382	Homo_sapiens
ENSDARG00000032876	trit1	99	72.239	ENSAPOG00000020918	trit1	94	71.659	Acanthochromis_polyacanthus
ENSDARG00000032876	trit1	95	64.241	ENSAMEG00000004342	TRIT1	96	58.499	Ailuropoda_melanoleuca
ENSDARG00000032876	trit1	98	72.222	ENSACIG00000017409	trit1	89	70.991	Amphilophus_citrinellus
ENSDARG00000032876	trit1	99	71.513	ENSAOCG00000009850	trit1	90	70.872	Amphiprion_ocellaris
ENSDARG00000032876	trit1	99	70.623	ENSAPEG00000001481	trit1	90	70.183	Amphiprion_percula
ENSDARG00000032876	trit1	99	69.733	ENSATEG00000005426	trit1	91	68.421	Anabas_testudineus
ENSDARG00000032876	trit1	74	51.183	ENSAPLG00000011421	TRIT1	95	51.183	Anas_platyrhynchos
ENSDARG00000032876	trit1	99	59.878	ENSACAG00000002280	TRIT1	90	55.727	Anolis_carolinensis
ENSDARG00000032876	trit1	98	62.883	ENSANAG00000030732	TRIT1	90	59.490	Aotus_nancymaae
ENSDARG00000032876	trit1	99	70.958	ENSACLG00000004920	trit1	91	70.208	Astatotilapia_calliptera
ENSDARG00000032876	trit1	99	75.676	ENSAMXG00000010959	trit1	97	71.556	Astyanax_mexicanus
ENSDARG00000032876	trit1	95	64.873	ENSBTAG00000013832	TRIT1	96	58.720	Bos_taurus
ENSDARG00000032876	trit1	91	41.613	WBGene00001740	gro-1	96	36.131	Caenorhabditis_elegans
ENSDARG00000032876	trit1	98	62.577	ENSCJAG00000002620	TRIT1	90	61.094	Callithrix_jacchus
ENSDARG00000032876	trit1	95	64.038	ENSCAFG00000003048	TRIT1	89	61.137	Canis_familiaris
ENSDARG00000032876	trit1	95	61.818	ENSCAFG00020003875	TRIT1	91	61.493	Canis_lupus_dingo
ENSDARG00000032876	trit1	95	63.950	ENSCHIG00000013259	TRIT1	91	60.138	Capra_hircus
ENSDARG00000032876	trit1	99	62.614	ENSTSYG00000004363	TRIT1	94	58.969	Carlito_syrichta
ENSDARG00000032876	trit1	76	55.685	ENSCAPG00000017001	TRIT1	87	55.685	Cavia_aperea
ENSDARG00000032876	trit1	95	64.762	ENSCPOG00000012820	TRIT1	96	57.709	Cavia_porcellus
ENSDARG00000032876	trit1	98	62.769	ENSCCAG00000031271	TRIT1	90	62.187	Cebus_capucinus
ENSDARG00000032876	trit1	95	62.382	ENSCATG00000034344	TRIT1	90	62.037	Cercocebus_atys
ENSDARG00000032876	trit1	95	64.856	ENSCLAG00000009828	TRIT1	96	58.407	Chinchilla_lanigera
ENSDARG00000032876	trit1	85	62.324	ENSCSAG00000001137	TRIT1	93	59.487	Chlorocebus_sabaeus
ENSDARG00000032876	trit1	95	64.873	ENSCHOG00000000435	TRIT1	91	61.305	Choloepus_hoffmanni
ENSDARG00000032876	trit1	95	50.000	ENSCSAVG00000002050	-	91	46.043	Ciona_savignyi
ENSDARG00000032876	trit1	95	64.013	ENSCANG00000043008	TRIT1	90	62.112	Colobus_angolensis_palliatus
ENSDARG00000032876	trit1	95	64.537	ENSCGRG00001001894	Trit1	96	58.667	Cricetulus_griseus_chok1gshd
ENSDARG00000032876	trit1	93	56.763	ENSCGRG00000007059	Trit1	92	56.763	Cricetulus_griseus_crigri
ENSDARG00000032876	trit1	99	70.536	ENSCSEG00000009574	trit1	92	69.907	Cynoglossus_semilaevis
ENSDARG00000032876	trit1	54	66.292	ENSCVAG00000000422	trit1	94	67.797	Cyprinodon_variegatus
ENSDARG00000032876	trit1	95	62.346	ENSDNOG00000001994	TRIT1	88	54.140	Dasypus_novemcinctus
ENSDARG00000032876	trit1	95	54.777	ENSDORG00000012449	Trit1	94	53.846	Dipodomys_ordii
ENSDARG00000032876	trit1	96	43.064	FBgn0043799	CG31381	94	39.130	Drosophila_melanogaster
ENSDARG00000032876	trit1	95	63.354	ENSETEG00000008733	TRIT1	99	60.235	Echinops_telfairi
ENSDARG00000032876	trit1	95	57.595	ENSEBUG00000012845	trit1	91	54.279	Eptatretus_burgeri
ENSDARG00000032876	trit1	95	62.422	ENSECAG00000010597	TRIT1	85	59.318	Equus_caballus
ENSDARG00000032876	trit1	99	55.455	ENSEEUG00000009269	TRIT1	73	56.160	Erinaceus_europaeus
ENSDARG00000032876	trit1	99	63.473	ENSELUG00000017278	trit1	88	63.934	Esox_lucius
ENSDARG00000032876	trit1	98	64.198	ENSFCAG00000006029	TRIT1	94	59.955	Felis_catus
ENSDARG00000032876	trit1	85	61.566	ENSFALG00000000532	TRIT1	94	58.730	Ficedula_albicollis
ENSDARG00000032876	trit1	95	61.538	ENSFDAG00000003098	TRIT1	98	57.432	Fukomys_damarensis
ENSDARG00000032876	trit1	99	62.985	ENSFHEG00000022274	trit1	99	62.985	Fundulus_heteroclitus
ENSDARG00000032876	trit1	99	68.343	ENSGMOG00000006522	trit1	100	67.361	Gadus_morhua
ENSDARG00000032876	trit1	99	61.094	ENSGALG00000003851	TRIT1	93	59.155	Gallus_gallus
ENSDARG00000032876	trit1	99	69.069	ENSGAFG00000018636	trit1	96	67.797	Gambusia_affinis
ENSDARG00000032876	trit1	99	68.142	ENSGACG00000008493	trit1	100	67.431	Gasterosteus_aculeatus
ENSDARG00000032876	trit1	85	64.184	ENSGAGG00000000522	TRIT1	92	61.600	Gopherus_agassizii
ENSDARG00000032876	trit1	99	61.934	ENSGGOG00000010070	TRIT1	93	60.479	Gorilla_gorilla
ENSDARG00000032876	trit1	99	70.659	ENSHBUG00000018999	trit1	91	69.977	Haplochromis_burtoni
ENSDARG00000032876	trit1	95	56.230	ENSHGLG00000009564	-	90	53.756	Heterocephalus_glaber_female
ENSDARG00000032876	trit1	95	63.578	ENSHGLG00000010308	-	92	59.579	Heterocephalus_glaber_female
ENSDARG00000032876	trit1	65	74.419	ENSHGLG00100018159	-	87	74.419	Heterocephalus_glaber_male
ENSDARG00000032876	trit1	95	63.578	ENSHGLG00100015382	-	97	57.522	Heterocephalus_glaber_male
ENSDARG00000032876	trit1	98	68.976	ENSHCOG00000006755	trit1	85	70.652	Hippocampus_comes
ENSDARG00000032876	trit1	99	75.375	ENSIPUG00000021822	trit1	91	71.715	Ictalurus_punctatus
ENSDARG00000032876	trit1	95	64.968	ENSSTOG00000006446	TRIT1	89	60.047	Ictidomys_tridecemlineatus
ENSDARG00000032876	trit1	95	55.873	ENSJJAG00000000300	-	90	54.312	Jaculus_jaculus
ENSDARG00000032876	trit1	95	58.147	ENSJJAG00000000316	-	94	55.504	Jaculus_jaculus
ENSDARG00000032876	trit1	98	68.111	ENSKMAG00000021788	trit1	91	65.909	Kryptolebias_marmoratus
ENSDARG00000032876	trit1	99	71.557	ENSLBEG00000024262	trit1	90	71.363	Labrus_bergylta
ENSDARG00000032876	trit1	99	66.567	ENSLACG00000013861	TRIT1	88	64.419	Latimeria_chalumnae
ENSDARG00000032876	trit1	99	71.006	ENSLOCG00000002057	trit1	91	70.139	Lepisosteus_oculatus
ENSDARG00000032876	trit1	95	63.376	ENSLAFG00000016876	TRIT1	91	59.953	Loxodonta_africana
ENSDARG00000032876	trit1	95	63.924	ENSMFAG00000001316	TRIT1	90	62.037	Macaca_fascicularis
ENSDARG00000032876	trit1	95	63.924	ENSMMUG00000016220	TRIT1	90	62.037	Macaca_mulatta
ENSDARG00000032876	trit1	95	63.924	ENSMNEG00000023137	TRIT1	90	62.037	Macaca_nemestrina
ENSDARG00000032876	trit1	95	63.924	ENSMLEG00000035296	TRIT1	90	62.037	Mandrillus_leucophaeus
ENSDARG00000032876	trit1	99	71.257	ENSMAMG00000005868	trit1	90	70.163	Mastacembelus_armatus
ENSDARG00000032876	trit1	99	70.659	ENSMZEG00005011506	trit1	91	69.977	Maylandia_zebra
ENSDARG00000032876	trit1	85	60.993	ENSMGAG00000005516	TRIT1	99	58.824	Meleagris_gallopavo
ENSDARG00000032876	trit1	99	61.329	ENSMAUG00000000399	Trit1	94	57.942	Mesocricetus_auratus
ENSDARG00000032876	trit1	95	64.557	ENSMICG00000016294	TRIT1	87	62.439	Microcebus_murinus
ENSDARG00000032876	trit1	99	63.333	ENSMOCG00000008173	Trit1	96	59.161	Microtus_ochrogaster
ENSDARG00000032876	trit1	87	63.590	ENSMMOG00000021140	trit1	90	63.590	Mola_mola
ENSDARG00000032876	trit1	95	63.438	ENSMODG00000017650	TRIT1	89	61.259	Monodelphis_domestica
ENSDARG00000032876	trit1	99	67.964	ENSMALG00000017843	trit1	91	66.744	Monopterus_albus
ENSDARG00000032876	trit1	95	66.134	MGP_CAROLIEiJ_G0026428	Trit1	96	59.688	Mus_caroli
ENSDARG00000032876	trit1	95	66.134	ENSMUSG00000028653	Trit1	96	59.911	Mus_musculus
ENSDARG00000032876	trit1	95	66.134	MGP_PahariEiJ_G0028758	Trit1	96	60.486	Mus_pahari
ENSDARG00000032876	trit1	95	65.815	MGP_SPRETEiJ_G0027408	Trit1	96	59.688	Mus_spretus
ENSDARG00000032876	trit1	95	64.241	ENSMPUG00000014291	TRIT1	91	60.557	Mustela_putorius_furo
ENSDARG00000032876	trit1	95	64.968	ENSMLUG00000000334	TRIT1	91	59.674	Myotis_lucifugus
ENSDARG00000032876	trit1	54	69.663	ENSNBRG00000020509	trit1	96	70.056	Neolamprologus_brichardi
ENSDARG00000032876	trit1	99	61.934	ENSNLEG00000012038	TRIT1	94	60.177	Nomascus_leucogenys
ENSDARG00000032876	trit1	79	76.106	ENSMEUG00000005217	TRIT1	76	76.106	Notamacropus_eugenii
ENSDARG00000032876	trit1	68	52.381	ENSOPRG00000003205	-	70	50.000	Ochotona_princeps
ENSDARG00000032876	trit1	95	62.893	ENSODEG00000006117	TRIT1	96	56.703	Octodon_degus
ENSDARG00000032876	trit1	99	69.912	ENSONIG00000015407	trit1	92	69.635	Oreochromis_niloticus
ENSDARG00000032876	trit1	85	62.278	ENSOANG00000002779	TRIT1	94	58.933	Ornithorhynchus_anatinus
ENSDARG00000032876	trit1	95	64.873	ENSOCUG00000002054	TRIT1	91	60.880	Oryctolagus_cuniculus
ENSDARG00000032876	trit1	99	70.517	ENSORLG00000005802	trit1	93	69.070	Oryzias_latipes
ENSDARG00000032876	trit1	99	70.821	ENSORLG00020005519	trit1	93	69.302	Oryzias_latipes_hni
ENSDARG00000032876	trit1	99	70.517	ENSORLG00015018715	trit1	93	68.605	Oryzias_latipes_hsok
ENSDARG00000032876	trit1	99	70.517	ENSOMEG00000006569	trit1	94	66.591	Oryzias_melastigma
ENSDARG00000032876	trit1	95	65.176	ENSOGAG00000009571	TRIT1	87	62.408	Otolemur_garnettii
ENSDARG00000032876	trit1	95	65.300	ENSOARG00000020140	TRIT1	90	60.930	Ovis_aries
ENSDARG00000032876	trit1	99	61.934	ENSPPAG00000023930	TRIT1	94	60.177	Pan_paniscus
ENSDARG00000032876	trit1	95	64.968	ENSPPRG00000009680	TRIT1	94	59.326	Panthera_pardus
ENSDARG00000032876	trit1	95	64.968	ENSPTIG00000021134	TRIT1	94	59.326	Panthera_tigris_altaica
ENSDARG00000032876	trit1	99	61.934	ENSPTRG00000000579	TRIT1	94	60.177	Pan_troglodytes
ENSDARG00000032876	trit1	95	63.924	ENSPANG00000018125	TRIT1	90	62.037	Papio_anubis
ENSDARG00000032876	trit1	85	68.327	ENSPKIG00000024527	trit1	97	66.492	Paramormyrops_kingsleyae
ENSDARG00000032876	trit1	85	44.484	ENSPSIG00000017073	TRIT1	99	47.075	Pelodiscus_sinensis
ENSDARG00000032876	trit1	85	68.085	ENSPMGG00000018445	trit1	92	67.368	Periophthalmus_magnuspinnatus
ENSDARG00000032876	trit1	99	62.424	ENSPEMG00000022418	Trit1	94	58.744	Peromyscus_maniculatus_bairdii
ENSDARG00000032876	trit1	86	57.241	ENSPMAG00000008892	trit1	96	55.759	Petromyzon_marinus
ENSDARG00000032876	trit1	95	65.931	ENSPCIG00000020666	TRIT1	91	65.931	Phascolarctos_cinereus
ENSDARG00000032876	trit1	99	71.257	ENSPFOG00000014626	trit1	92	68.736	Poecilia_formosa
ENSDARG00000032876	trit1	99	69.345	ENSPLAG00000011669	trit1	97	69.436	Poecilia_latipinna
ENSDARG00000032876	trit1	78	68.605	ENSPMEG00000023788	trit1	93	68.605	Poecilia_mexicana
ENSDARG00000032876	trit1	99	69.069	ENSPREG00000018182	trit1	93	69.069	Poecilia_reticulata
ENSDARG00000032876	trit1	99	61.934	ENSPPYG00000001499	TRIT1	89	60.941	Pongo_abelii
ENSDARG00000032876	trit1	77	48.703	ENSPCAG00000014680	TRIT1	81	68.750	Procavia_capensis
ENSDARG00000032876	trit1	99	64.024	ENSPCOG00000014150	TRIT1	89	61.848	Propithecus_coquereli
ENSDARG00000032876	trit1	83	70.796	ENSPVAG00000003344	TRIT1	80	70.796	Pteropus_vampyrus
ENSDARG00000032876	trit1	92	70.645	ENSPNYG00000001003	trit1	100	71.290	Pundamilia_nyererei
ENSDARG00000032876	trit1	99	77.177	ENSPNAG00000009466	trit1	93	76.613	Pygocentrus_nattereri
ENSDARG00000032876	trit1	95	62.195	ENSRNOG00000014274	Trit1	89	60.138	Rattus_norvegicus
ENSDARG00000032876	trit1	95	62.975	ENSRBIG00000043179	TRIT1	90	61.111	Rhinopithecus_bieti
ENSDARG00000032876	trit1	95	62.975	ENSRROG00000042670	TRIT1	90	61.111	Rhinopithecus_roxellana
ENSDARG00000032876	trit1	95	34.921	YOR274W	-	93	32.258	Saccharomyces_cerevisiae
ENSDARG00000032876	trit1	98	62.577	ENSSBOG00000024417	TRIT1	90	62.422	Saimiri_boliviensis_boliviensis
ENSDARG00000032876	trit1	87	60.616	ENSSHAG00000018363	TRIT1	91	59.067	Sarcophilus_harrisii
ENSDARG00000032876	trit1	99	69.419	ENSSFOG00015007284	trit1	84	68.298	Scleropages_formosus
ENSDARG00000032876	trit1	99	70.359	ENSSMAG00000020730	trit1	91	68.591	Scophthalmus_maximus
ENSDARG00000032876	trit1	99	70.659	ENSSDUG00000001683	trit1	91	69.021	Seriola_dumerili
ENSDARG00000032876	trit1	99	70.359	ENSSLDG00000008379	trit1	91	68.337	Seriola_lalandi_dorsalis
ENSDARG00000032876	trit1	97	61.747	ENSSARG00000004540	TRIT1	95	58.057	Sorex_araneus
ENSDARG00000032876	trit1	85	60.284	ENSSPUG00000003472	TRIT1	76	60.267	Sphenodon_punctatus
ENSDARG00000032876	trit1	99	70.030	ENSSPAG00000020745	trit1	91	69.807	Stegastes_partitus
ENSDARG00000032876	trit1	50	61.212	ENSSSCG00000003667	-	91	61.212	Sus_scrofa
ENSDARG00000032876	trit1	85	59.507	ENSTGUG00000001242	TRIT1	100	57.784	Taeniopygia_guttata
ENSDARG00000032876	trit1	98	70.679	ENSTRUG00000013936	trit1	93	68.322	Takifugu_rubripes
ENSDARG00000032876	trit1	98	71.605	ENSTNIG00000009240	trit1	98	68.100	Tetraodon_nigroviridis
ENSDARG00000032876	trit1	73	76.829	ENSTBEG00000001317	TRIT1	69	76.829	Tupaia_belangeri
ENSDARG00000032876	trit1	95	64.557	ENSTTRG00000005064	TRIT1	87	62.683	Tursiops_truncatus
ENSDARG00000032876	trit1	76	58.893	ENSUAMG00000000522	-	98	56.569	Ursus_americanus
ENSDARG00000032876	trit1	95	63.924	ENSUMAG00000017299	TRIT1	83	60.227	Ursus_maritimus
ENSDARG00000032876	trit1	98	57.975	ENSVPAG00000003008	TRIT1	88	57.381	Vicugna_pacos
ENSDARG00000032876	trit1	57	62.234	ENSVVUG00000005208	-	93	60.825	Vulpes_vulpes
ENSDARG00000032876	trit1	95	61.728	ENSXETG00000010952	trit1	93	59.302	Xenopus_tropicalis
ENSDARG00000032876	trit1	99	68.468	ENSXMAG00000016302	trit1	91	68.563	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0006400	tRNA modification	21873635.	IBA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0052381	tRNA dimethylallyltransferase activity	21873635.	IBA	Function
GO:0052381	tRNA dimethylallyltransferase activity	-	IEA	Function