EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000033056 (Gene tree)
Gene ID: 100124616
Gene Symbol: zgc:171927
Alias: -
Full Name: zgc:171927
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5751 bases
Position: chr15:31282220-31287970
Accession: ZDB-GENE-070822-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000005519	MMR_HSR1	PF01926.23	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000004518	-	1373	-	ENSDARP00000005519	210 (aa)	-	F1RBB0

Gene Model

Click here to download ENSDARG00000033056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000033056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000033056	zgc:171927	73	35.294	ENSDARG00000063321	rabl2	68	35.294
ENSDARG00000033056	zgc:171927	62	52.308	ENSDARG00000018107	rab3da	77	52.308
ENSDARG00000033056	zgc:171927	84	47.222	ENSDARG00000098344	rab18b	87	47.222
ENSDARG00000033056	zgc:171927	98	41.748	ENSDARG00000052954	rab25b	96	41.748
ENSDARG00000033056	zgc:171927	57	30.000	ENSDARG00000006915	arl8ba	62	30.000
ENSDARG00000033056	zgc:171927	78	35.758	ENSDARG00000005651	hrasb	98	34.266
ENSDARG00000033056	zgc:171927	100	73.810	ENSDARG00000056479	rab1bb	100	73.810
ENSDARG00000033056	zgc:171927	79	64.458	ENSDARG00000037967	si:dkey-16l2.16	96	71.304
ENSDARG00000033056	zgc:171927	77	35.583	ENSDARG00000038225	nras	85	35.583
ENSDARG00000033056	zgc:171927	74	40.881	ENSDARG00000045027	rab9a	79	40.881
ENSDARG00000033056	zgc:171927	90	36.410	ENSDARG00000021287	rab7b	94	36.410
ENSDARG00000033056	zgc:171927	78	35.976	ENSDARG00000010844	kras	98	34.225
ENSDARG00000033056	zgc:171927	93	37.056	ENSDARG00000029885	rab41	92	37.056
ENSDARG00000033056	zgc:171927	78	35.758	ENSDARG00000006553	rras	83	34.756
ENSDARG00000033056	zgc:171927	80	44.444	ENSDARG00000019312	rab39ba	80	44.444
ENSDARG00000033056	zgc:171927	80	43.258	ENSDARG00000003257	zgc:101559	76	43.258
ENSDARG00000033056	zgc:171927	76	30.303	ENSDARG00000070916	dnajc27	60	30.303
ENSDARG00000033056	zgc:171927	79	37.870	ENSDARG00000087243	zgc:100918	82	37.870
ENSDARG00000033056	zgc:171927	82	56.069	ENSDARG00000103934	megf8	100	56.069
ENSDARG00000033056	zgc:171927	81	40.984	ENSDARG00000052290	rab33ba	77	40.541
ENSDARG00000033056	zgc:171927	63	32.877	ENSDARG00000057857	arfrp1	76	32.877
ENSDARG00000033056	zgc:171927	79	64.848	ENSDARG00000102078	CABZ01072548.1	84	64.848
ENSDARG00000033056	zgc:171927	85	41.341	ENSDARG00000058800	rab25a	85	41.341
ENSDARG00000033056	zgc:171927	99	46.860	ENSDARG00000037884	rab30	98	46.860
ENSDARG00000033056	zgc:171927	57	30.833	ENSDARG00000070318	arl8bb	62	30.833
ENSDARG00000033056	zgc:171927	81	52.353	ENSDARG00000041450	rab11a	79	52.353
ENSDARG00000033056	zgc:171927	84	42.541	ENSDARG00000018602	rab5aa	84	42.541
ENSDARG00000033056	zgc:171927	99	38.967	ENSDARG00000034215	rab42a	100	38.967
ENSDARG00000033056	zgc:171927	96	36.453	ENSDARG00000103714	rab6a	94	36.453
ENSDARG00000033056	zgc:171927	79	37.870	ENSDARG00000020497	rab7a	82	37.870
ENSDARG00000033056	zgc:171927	92	78.866	ENSDARG00000052263	rab1aa	96	78.866
ENSDARG00000033056	zgc:171927	79	37.126	ENSDARG00000100379	si:dkey-34d22.2	90	37.126
ENSDARG00000033056	zgc:171927	79	34.524	ENSDARG00000062865	mras	84	33.333
ENSDARG00000033056	zgc:171927	80	44.444	ENSDARG00000036501	rab39bb	80	44.444
ENSDARG00000033056	zgc:171927	77	37.952	ENSDARG00000103391	rab9b	82	37.952
ENSDARG00000033056	zgc:171927	98	44.076	ENSDARG00000090086	rab11bb	96	44.076
ENSDARG00000033056	zgc:171927	100	75.714	ENSDARG00000029663	rab1ab	100	75.714
ENSDARG00000033056	zgc:171927	56	32.203	ENSDARG00000078686	arl8a	61	32.203
ENSDARG00000033056	zgc:171927	83	45.714	ENSDARG00000055291	rab18a	85	45.714
ENSDARG00000033056	zgc:171927	76	35.849	ENSDARG00000004151	rab23	72	35.673
ENSDARG00000033056	zgc:171927	79	50.000	ENSDARG00000026484	rab15	78	50.000
ENSDARG00000033056	zgc:171927	78	49.091	ENSDARG00000089428	rab12	70	49.091
ENSDARG00000033056	zgc:171927	96	35.885	ENSDARG00000014058	rab36	79	35.885
ENSDARG00000033056	zgc:171927	78	36.585	ENSDARG00000013161	zgc:55558	87	36.585
ENSDARG00000033056	zgc:171927	100	35.945	ENSDARG00000102580	CU571310.1	99	35.945
ENSDARG00000033056	zgc:171927	81	34.302	ENSDARG00000075285	si:ch73-116o1.2	84	33.714
ENSDARG00000033056	zgc:171927	96	37.788	ENSDARG00000045628	rab34a	79	37.788
ENSDARG00000033056	zgc:171927	78	35.976	ENSDARG00000098497	hrasa	86	35.758
ENSDARG00000033056	zgc:171927	90	34.536	ENSDARG00000010977	rab34b	63	41.615
ENSDARG00000033056	zgc:171927	84	41.989	ENSDARG00000007257	rab5ab	84	41.989
ENSDARG00000033056	zgc:171927	82	38.636	ENSDARG00000026098	si:dkey-13a21.4	85	38.636
ENSDARG00000033056	zgc:171927	80	51.190	ENSDARG00000041878	rab11ba	77	51.190
ENSDARG00000033056	zgc:171927	60	31.008	ENSDARG00000033182	arl4ab	63	31.008
ENSDARG00000033056	zgc:171927	75	49.367	ENSDARG00000114797	rab3b	73	49.367
ENSDARG00000033056	zgc:171927	57	30.579	ENSDARG00000071409	arl3	64	30.579
ENSDARG00000033056	zgc:171927	100	75.238	ENSDARG00000058044	rab1ba	100	75.238
ENSDARG00000033056	zgc:171927	91	36.126	ENSDARG00000031343	rab6bb	91	36.126
ENSDARG00000033056	zgc:171927	78	42.262	ENSDARG00000057394	rab33a	71	42.262
ENSDARG00000033056	zgc:171927	85	38.764	ENSDARG00000034522	rab6ba	84	38.764
ENSDARG00000033056	zgc:171927	80	55.030	ENSDARG00000034771	rab13	85	55.030
ENSDARG00000033056	zgc:171927	77	65.432	ENSDARG00000058425	rab35b	95	58.854
ENSDARG00000033056	zgc:171927	95	41.500	ENSDARG00000035188	rab14l	92	41.500
ENSDARG00000033056	zgc:171927	56	30.000	ENSDARG00000099918	arl4aa	59	30.000
ENSDARG00000033056	zgc:171927	59	33.333	ENSDARG00000045074	arl4d	62	33.333
ENSDARG00000033056	zgc:171927	80	52.976	ENSDARG00000014340	rab11al	78	52.976
ENSDARG00000033056	zgc:171927	88	48.404	ENSDARG00000020261	rab2a	99	44.762
ENSDARG00000033056	zgc:171927	91	43.750	ENSDARG00000074246	rab14	88	43.750
ENSDARG00000033056	zgc:171927	96	36.634	ENSDARG00000015807	rab22a	97	36.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000033056	zgc:171927	100	79.070	ENSAPOG00000004980	-	100	79.070	Acanthochromis_polyacanthus
ENSDARG00000033056	zgc:171927	100	79.535	ENSACIG00000009006	zgc:171927	100	79.535	Amphilophus_citrinellus
ENSDARG00000033056	zgc:171927	100	77.209	ENSAOCG00000024149	-	100	77.209	Amphiprion_ocellaris
ENSDARG00000033056	zgc:171927	72	84.516	ENSAOCG00000013808	-	92	95.000	Amphiprion_ocellaris
ENSDARG00000033056	zgc:171927	100	77.674	ENSAPEG00000022171	zgc:171927	99	77.674	Amphiprion_percula
ENSDARG00000033056	zgc:171927	100	78.605	ENSATEG00000003430	zgc:171927	100	78.605	Anabas_testudineus
ENSDARG00000033056	zgc:171927	100	79.343	ENSACLG00000013734	-	100	79.343	Astatotilapia_calliptera
ENSDARG00000033056	zgc:171927	100	89.048	ENSAMXG00000039486	zgc:171927	100	89.048	Astyanax_mexicanus
ENSDARG00000033056	zgc:171927	100	78.140	ENSCSEG00000014416	zgc:171927	100	78.140	Cynoglossus_semilaevis
ENSDARG00000033056	zgc:171927	100	78.140	ENSCVAG00000009222	zgc:171927	100	78.140	Cyprinodon_variegatus
ENSDARG00000033056	zgc:171927	100	85.782	ENSELUG00000011680	zgc:171927	100	86.256	Esox_lucius
ENSDARG00000033056	zgc:171927	100	77.674	ENSFHEG00000022176	zgc:171927	100	77.674	Fundulus_heteroclitus
ENSDARG00000033056	zgc:171927	98	72.596	ENSGMOG00000004979	-	97	72.596	Gadus_morhua
ENSDARG00000033056	zgc:171927	98	77.143	ENSGAFG00000015702	zgc:171927	84	77.143	Gambusia_affinis
ENSDARG00000033056	zgc:171927	100	78.605	ENSGACG00000013401	zgc:171927	99	78.605	Gasterosteus_aculeatus
ENSDARG00000033056	zgc:171927	100	79.343	ENSHBUG00000002397	-	100	79.343	Haplochromis_burtoni
ENSDARG00000033056	zgc:171927	100	78.140	ENSKMAG00000009856	zgc:171927	100	78.140	Kryptolebias_marmoratus
ENSDARG00000033056	zgc:171927	100	78.140	ENSLBEG00000005791	-	100	78.140	Labrus_bergylta
ENSDARG00000033056	zgc:171927	98	77.619	ENSLBEG00000027226	-	89	77.619	Labrus_bergylta
ENSDARG00000033056	zgc:171927	98	78.049	ENSLOCG00000014692	zgc:171927	96	78.049	Lepisosteus_oculatus
ENSDARG00000033056	zgc:171927	100	77.209	ENSMAMG00000020135	zgc:171927	100	77.209	Mastacembelus_armatus
ENSDARG00000033056	zgc:171927	100	79.343	ENSMZEG00005024685	-	100	79.343	Maylandia_zebra
ENSDARG00000033056	zgc:171927	100	76.744	ENSMMOG00000009833	-	100	76.744	Mola_mola
ENSDARG00000033056	zgc:171927	100	79.717	ENSMALG00000021129	zgc:171927	100	79.717	Monopterus_albus
ENSDARG00000033056	zgc:171927	100	78.404	ENSNBRG00000006202	zgc:171927	100	78.404	Neolamprologus_brichardi
ENSDARG00000033056	zgc:171927	100	78.505	ENSORLG00000000602	zgc:171927	100	78.505	Oryzias_latipes
ENSDARG00000033056	zgc:171927	100	78.505	ENSORLG00020021071	zgc:171927	100	78.505	Oryzias_latipes_hni
ENSDARG00000033056	zgc:171927	100	77.570	ENSORLG00015010098	zgc:171927	100	77.570	Oryzias_latipes_hsok
ENSDARG00000033056	zgc:171927	100	78.605	ENSOMEG00000020594	zgc:171927	100	78.605	Oryzias_melastigma
ENSDARG00000033056	zgc:171927	100	78.605	ENSPFOG00000013810	zgc:171927	99	78.605	Poecilia_formosa
ENSDARG00000033056	zgc:171927	100	78.140	ENSPLAG00000005869	zgc:171927	100	78.140	Poecilia_latipinna
ENSDARG00000033056	zgc:171927	100	78.605	ENSPMEG00000022350	zgc:171927	100	78.605	Poecilia_mexicana
ENSDARG00000033056	zgc:171927	100	78.140	ENSPREG00000017517	zgc:171927	100	78.140	Poecilia_reticulata
ENSDARG00000033056	zgc:171927	100	78.873	ENSPNYG00000007520	-	100	78.873	Pundamilia_nyererei
ENSDARG00000033056	zgc:171927	100	91.905	ENSPNAG00000029574	zgc:171927	100	91.905	Pygocentrus_nattereri
ENSDARG00000033056	zgc:171927	100	86.667	ENSSFOG00015005464	zgc:171927	99	86.667	Scleropages_formosus
ENSDARG00000033056	zgc:171927	100	77.209	ENSSMAG00000004416	-	100	77.209	Scophthalmus_maximus
ENSDARG00000033056	zgc:171927	100	79.070	ENSSDUG00000004445	zgc:171927	100	79.070	Seriola_dumerili
ENSDARG00000033056	zgc:171927	100	79.070	ENSSLDG00000018024	zgc:171927	100	79.070	Seriola_lalandi_dorsalis
ENSDARG00000033056	zgc:171927	100	78.605	ENSSPAG00000013533	zgc:171927	100	78.605	Stegastes_partitus
ENSDARG00000033056	zgc:171927	100	77.674	ENSXCOG00000010695	zgc:171927	100	77.674	Xiphophorus_couchianus
ENSDARG00000033056	zgc:171927	100	77.209	ENSXMAG00000004683	zgc:171927	100	77.209	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000139	Golgi membrane	21873635.	IBA	Component
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process