EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000033320 (Gene tree)
Gene ID: 550581
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: secretion associated%2C Ras related GTPase 1Ab
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5656 bases
Position: chr13:30144937-30150592
Accession: ZDB-GENE-050417-437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000041514	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSDARP00000123126	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000041515	-	1658	-	ENSDARP00000041514	198 (aa)	-	B7ZD40
ENSDART00000143093	-	876	XM_005156839	ENSDARP00000123126	198 (aa)	XP_005156896	B7ZD40

Gene Model

Click here to download ENSDARG00000033320's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000033320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000033320	sar1ab	94	30.159	ENSDARG00000016393	arf2b	96	30.159
ENSDARG00000033320	sar1ab	89	32.778	ENSDARG00000063223	arl14	84	32.778
ENSDARG00000033320	sar1ab	72	35.664	ENSDARG00000069496	arl2	78	35.664
ENSDARG00000033320	sar1ab	86	30.994	ENSDARG00000056794	zgc:110197	87	30.994
ENSDARG00000033320	sar1ab	87	31.034	ENSDARG00000070472	arf5	89	31.034
ENSDARG00000033320	sar1ab	64	31.818	ENSDARG00000045074	arl4d	66	31.818
ENSDARG00000033320	sar1ab	87	30.814	ENSDARG00000071409	arl3	88	30.814
ENSDARG00000033320	sar1ab	100	87.879	ENSDARG00000103403	sar1b	100	87.879
ENSDARG00000033320	sar1ab	64	32.031	ENSDARG00000078686	arl8a	69	32.031
ENSDARG00000033320	sar1ab	94	30.159	ENSDARG00000056582	arf2b	96	30.159
ENSDARG00000033320	sar1ab	67	34.783	ENSDARG00000032708	arl4cb	69	34.783
ENSDARG00000033320	sar1ab	67	35.036	ENSDARG00000099918	arl4aa	66	35.878
ENSDARG00000033320	sar1ab	88	32.203	ENSDARG00000045989	arf4a	91	32.203
ENSDARG00000033320	sar1ab	94	30.000	ENSDARG00000032056	arl6	96	30.000
ENSDARG00000033320	sar1ab	87	33.333	ENSDARG00000074210	ARF5	78	33.333
ENSDARG00000033320	sar1ab	64	34.848	ENSDARG00000033182	arl4ab	66	34.848
ENSDARG00000033320	sar1ab	87	31.034	ENSDARG00000113899	zgc:77650	89	31.034
ENSDARG00000033320	sar1ab	64	32.031	ENSDARG00000006915	arl8ba	69	32.031
ENSDARG00000033320	sar1ab	69	30.714	ENSDARG00000012763	arl13b	54	30.714
ENSDARG00000033320	sar1ab	53	34.615	ENSDARG00000014763	arf2a	88	34.615
ENSDARG00000033320	sar1ab	73	32.886	ENSDARG00000057606	arl4ca	75	32.886
ENSDARG00000033320	sar1ab	94	30.319	ENSDARG00000070539	arf3a	96	30.319
ENSDARG00000033320	sar1ab	94	32.258	ENSDARG00000111106	arl3l1	93	32.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000033320	sar1ab	100	86.869	ENSACIG00000019827	sar1ab	100	86.869	Amphilophus_citrinellus
ENSDARG00000033320	sar1ab	100	90.404	ENSAOCG00000022062	sar1ab	100	90.404	Amphiprion_ocellaris
ENSDARG00000033320	sar1ab	100	90.404	ENSAPEG00000011525	sar1ab	100	90.404	Amphiprion_percula
ENSDARG00000033320	sar1ab	100	92.424	ENSATEG00000003466	sar1ab	100	92.424	Anabas_testudineus
ENSDARG00000033320	sar1ab	100	85.354	ENSACLG00000013053	sar1ab	100	85.354	Astatotilapia_calliptera
ENSDARG00000033320	sar1ab	100	90.404	ENSCSEG00000004825	sar1ab	100	90.404	Cynoglossus_semilaevis
ENSDARG00000033320	sar1ab	100	85.354	ENSCVAG00000015162	sar1ab	100	85.354	Cyprinodon_variegatus
ENSDARG00000033320	sar1ab	100	81.313	ENSCVAG00000006500	-	100	81.313	Cyprinodon_variegatus
ENSDARG00000033320	sar1ab	100	85.354	ENSELUG00000013652	sar1a	100	85.354	Esox_lucius
ENSDARG00000033320	sar1ab	100	93.434	ENSELUG00000024279	sar1ab	100	93.434	Esox_lucius
ENSDARG00000033320	sar1ab	100	81.818	ENSFHEG00000012352	-	100	81.818	Fundulus_heteroclitus
ENSDARG00000033320	sar1ab	100	85.354	ENSFHEG00000021773	sar1ab	100	85.354	Fundulus_heteroclitus
ENSDARG00000033320	sar1ab	100	89.394	ENSGMOG00000012588	sar1ab	100	89.394	Gadus_morhua
ENSDARG00000033320	sar1ab	100	81.818	ENSGAFG00000004846	-	100	81.818	Gambusia_affinis
ENSDARG00000033320	sar1ab	100	86.364	ENSGAFG00000009702	sar1ab	100	86.364	Gambusia_affinis
ENSDARG00000033320	sar1ab	100	90.404	ENSGACG00000008616	sar1ab	100	90.404	Gasterosteus_aculeatus
ENSDARG00000033320	sar1ab	100	84.343	ENSHBUG00000021221	sar1ab	100	84.343	Haplochromis_burtoni
ENSDARG00000033320	sar1ab	100	91.919	ENSHCOG00000002845	sar1ab	80	91.919	Hippocampus_comes
ENSDARG00000033320	sar1ab	100	86.869	ENSKMAG00000018006	sar1ab	100	86.869	Kryptolebias_marmoratus
ENSDARG00000033320	sar1ab	100	92.929	ENSLBEG00000001114	sar1ab	100	92.929	Labrus_bergylta
ENSDARG00000033320	sar1ab	100	90.404	ENSMAMG00000021314	sar1ab	100	90.404	Mastacembelus_armatus
ENSDARG00000033320	sar1ab	100	85.354	ENSMZEG00005027606	sar1ab	100	85.354	Maylandia_zebra
ENSDARG00000033320	sar1ab	100	90.909	ENSMMOG00000010360	sar1ab	100	90.909	Mola_mola
ENSDARG00000033320	sar1ab	100	88.889	ENSMALG00000005831	sar1ab	100	88.889	Monopterus_albus
ENSDARG00000033320	sar1ab	100	84.848	ENSNBRG00000018772	sar1ab	100	84.848	Neolamprologus_brichardi
ENSDARG00000033320	sar1ab	100	85.859	ENSONIG00000018509	sar1ab	100	85.859	Oreochromis_niloticus
ENSDARG00000033320	sar1ab	100	87.879	ENSORLG00000006779	sar1ab	67	87.879	Oryzias_latipes
ENSDARG00000033320	sar1ab	100	83.838	ENSORLG00000009132	-	90	83.838	Oryzias_latipes
ENSDARG00000033320	sar1ab	100	83.838	ENSORLG00020007024	-	90	83.838	Oryzias_latipes_hni
ENSDARG00000033320	sar1ab	100	88.384	ENSORLG00020005458	sar1ab	100	88.384	Oryzias_latipes_hni
ENSDARG00000033320	sar1ab	100	83.333	ENSORLG00015006223	-	94	88.393	Oryzias_latipes_hsok
ENSDARG00000033320	sar1ab	100	87.879	ENSORLG00015010542	sar1ab	100	87.879	Oryzias_latipes_hsok
ENSDARG00000033320	sar1ab	100	83.333	ENSOMEG00000012020	-	100	83.333	Oryzias_melastigma
ENSDARG00000033320	sar1ab	100	89.394	ENSOMEG00000004948	sar1ab	100	89.394	Oryzias_melastigma
ENSDARG00000033320	sar1ab	100	86.869	ENSPKIG00000007615	sar1ab	100	86.869	Paramormyrops_kingsleyae
ENSDARG00000033320	sar1ab	100	91.919	ENSPMGG00000013330	sar1ab	100	91.919	Periophthalmus_magnuspinnatus
ENSDARG00000033320	sar1ab	100	87.374	ENSPFOG00000023432	sar1ab	100	87.374	Poecilia_formosa
ENSDARG00000033320	sar1ab	100	87.374	ENSPLAG00000023705	sar1ab	100	87.374	Poecilia_latipinna
ENSDARG00000033320	sar1ab	100	87.374	ENSPMEG00000000559	sar1ab	100	87.374	Poecilia_mexicana
ENSDARG00000033320	sar1ab	100	81.313	ENSPMEG00000001717	-	100	81.313	Poecilia_mexicana
ENSDARG00000033320	sar1ab	100	87.374	ENSPREG00000016098	sar1ab	100	87.374	Poecilia_reticulata
ENSDARG00000033320	sar1ab	100	84.848	ENSPNYG00000011603	sar1ab	100	84.848	Pundamilia_nyererei
ENSDARG00000033320	sar1ab	100	94.444	ENSPNAG00000008007	sar1ab	100	94.444	Pygocentrus_nattereri
ENSDARG00000033320	sar1ab	100	90.404	ENSSFOG00015014010	sar1a	100	90.404	Scleropages_formosus
ENSDARG00000033320	sar1ab	56	91.892	ENSSMAG00000020758	sar1ab	80	91.892	Scophthalmus_maximus
ENSDARG00000033320	sar1ab	100	91.919	ENSSDUG00000010773	sar1ab	100	91.919	Seriola_dumerili
ENSDARG00000033320	sar1ab	100	91.919	ENSSLDG00000025558	sar1ab	100	91.919	Seriola_lalandi_dorsalis
ENSDARG00000033320	sar1ab	100	90.909	ENSSPAG00000009194	sar1ab	100	90.909	Stegastes_partitus
ENSDARG00000033320	sar1ab	100	89.394	ENSTRUG00000007269	sar1ab	100	89.394	Takifugu_rubripes
ENSDARG00000033320	sar1ab	100	88.384	ENSTNIG00000008635	sar1ab	100	88.384	Tetraodon_nigroviridis
ENSDARG00000033320	sar1ab	100	82.323	ENSXMAG00000026223	SAR1A	100	82.323	Xiphophorus_maculatus
ENSDARG00000033320	sar1ab	100	86.869	ENSXMAG00000003130	sar1ab	100	86.869	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003400	regulation of COPII vesicle coating	21873635.	IBA	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016050	vesicle organization	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0030127	COPII vesicle coat	21873635.	IBA	Component
GO:0061024	membrane organization	21873635.	IBA	Process
GO:0070863	positive regulation of protein exit from endoplasmic reticulum	21873635.	IBA	Process
GO:0070971	endoplasmic reticulum exit site	21873635.	IBA	Component