EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000033418 (Gene tree)
Gene ID: 448925
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 11893 bases
Position: chr7:38265363-38277255
Accession: ZDB-GENE-040914-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000014631	DUF1604	PF07713.13	2.2e-37	1	1
ENSDARP00000014631	G-patch	PF01585.23	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000173613	-	293	-	ENSDARP00000142648	98 (aa)	-	A0A1D5NS39
ENSDART00000009386	-	3161	-	ENSDARP00000014631	975 (aa)	-	G1K2G6
ENSDART00000130085	-	742	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000033418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000033418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000033418	gpatch1	92	51.168	ENSG00000076650	GPATCH1	75	76.042	Homo_sapiens
ENSDARG00000033418	gpatch1	92	51.652	ENSAMEG00000015575	GPATCH1	90	51.432	Ailuropoda_melanoleuca
ENSDARG00000033418	gpatch1	81	81.622	ENSAOCG00000006668	gpatch1	75	81.622	Amphiprion_ocellaris
ENSDARG00000033418	gpatch1	81	60.804	ENSAPEG00000000026	gpatch1	90	58.068	Amphiprion_percula
ENSDARG00000033418	gpatch1	81	61.510	ENSATEG00000014494	gpatch1	90	59.056	Anabas_testudineus
ENSDARG00000033418	gpatch1	91	51.592	ENSAPLG00000007584	GPATCH1	96	50.730	Anas_platyrhynchos
ENSDARG00000033418	gpatch1	92	51.217	ENSANAG00000027002	GPATCH1	90	50.715	Aotus_nancymaae
ENSDARG00000033418	gpatch1	81	61.481	ENSACLG00000024740	gpatch1	95	56.315	Astatotilapia_calliptera
ENSDARG00000033418	gpatch1	93	67.240	ENSAMXG00000020177	gpatch1	97	67.568	Astyanax_mexicanus
ENSDARG00000033418	gpatch1	92	50.385	ENSBTAG00000000721	GPATCH1	90	50.165	Bos_taurus
ENSDARG00000033418	gpatch1	92	50.996	ENSCJAG00000000684	GPATCH1	90	50.605	Callithrix_jacchus
ENSDARG00000033418	gpatch1	92	52.053	ENSCAFG00000007457	GPATCH1	76	51.325	Canis_familiaris
ENSDARG00000033418	gpatch1	95	51.230	ENSCAFG00020019731	GPATCH1	90	51.325	Canis_lupus_dingo
ENSDARG00000033418	gpatch1	81	54.693	ENSCHIG00000019626	GPATCH1	83	54.511	Capra_hircus
ENSDARG00000033418	gpatch1	78	51.697	ENSCAPG00000008827	GPATCH1	90	47.964	Cavia_aperea
ENSDARG00000033418	gpatch1	73	50.069	ENSCPOG00000024477	GPATCH1	93	48.734	Cavia_porcellus
ENSDARG00000033418	gpatch1	92	50.885	ENSCCAG00000024676	GPATCH1	90	50.495	Cebus_capucinus
ENSDARG00000033418	gpatch1	92	50.939	ENSCATG00000043637	GPATCH1	75	77.083	Cercocebus_atys
ENSDARG00000033418	gpatch1	78	53.776	ENSCLAG00000003395	-	91	49.886	Chinchilla_lanigera
ENSDARG00000033418	gpatch1	99	48.893	ENSCSAG00000004743	GPATCH1	99	49.200	Chlorocebus_sabaeus
ENSDARG00000033418	gpatch1	78	59.447	ENSCHOG00000012865	GPATCH1	83	59.447	Choloepus_hoffmanni
ENSDARG00000033418	gpatch1	78	55.584	ENSCPBG00000000666	GPATCH1	92	54.756	Chrysemys_picta_bellii
ENSDARG00000033418	gpatch1	91	33.851	ENSCING00000012518	-	95	32.963	Ciona_intestinalis
ENSDARG00000033418	gpatch1	80	50.233	ENSCANG00000012540	GPATCH1	88	50.233	Colobus_angolensis_palliatus
ENSDARG00000033418	gpatch1	89	50.915	ENSCGRG00001016736	Gpatch1	90	50.171	Cricetulus_griseus_chok1gshd
ENSDARG00000033418	gpatch1	78	44.602	ENSCGRG00000005069	Gpatch1	77	44.459	Cricetulus_griseus_crigri
ENSDARG00000033418	gpatch1	85	52.590	ENSCSEG00000019456	-	75	81.443	Cynoglossus_semilaevis
ENSDARG00000033418	gpatch1	91	51.121	ENSDNOG00000005291	GPATCH1	94	49.670	Dasypus_novemcinctus
ENSDARG00000033418	gpatch1	94	47.803	ENSDORG00000012546	Gpatch1	93	49.109	Dipodomys_ordii
ENSDARG00000033418	gpatch1	96	30.200	FBgn0036386	CG8833	68	32.999	Drosophila_melanogaster
ENSDARG00000033418	gpatch1	92	47.577	ENSETEG00000003626	GPATCH1	91	46.366	Echinops_telfairi
ENSDARG00000033418	gpatch1	84	38.747	ENSEBUG00000011286	gpatch1	83	38.452	Eptatretus_burgeri
ENSDARG00000033418	gpatch1	94	49.367	ENSEASG00005021162	GPATCH1	96	49.156	Equus_asinus_asinus
ENSDARG00000033418	gpatch1	92	51.432	ENSECAG00000022743	GPATCH1	87	50.715	Equus_caballus
ENSDARG00000033418	gpatch1	72	52.709	ENSEEUG00000012925	GPATCH1	66	65.753	Erinaceus_europaeus
ENSDARG00000033418	gpatch1	100	56.565	ENSELUG00000018195	gpatch1	89	60.398	Esox_lucius
ENSDARG00000033418	gpatch1	92	51.000	ENSFCAG00000014917	GPATCH1	90	50.166	Felis_catus
ENSDARG00000033418	gpatch1	93	50.851	ENSFALG00000007821	GPATCH1	89	51.211	Ficedula_albicollis
ENSDARG00000033418	gpatch1	78	53.516	ENSFDAG00000003871	GPATCH1	90	49.773	Fukomys_damarensis
ENSDARG00000033418	gpatch1	76	60.460	ENSGMOG00000003830	gpatch1	88	60.000	Gadus_morhua
ENSDARG00000033418	gpatch1	94	50.159	ENSGALG00000004839	GPATCH1	92	50.552	Gallus_gallus
ENSDARG00000033418	gpatch1	91	55.359	ENSGACG00000017544	gpatch1	93	54.194	Gasterosteus_aculeatus
ENSDARG00000033418	gpatch1	92	52.700	ENSGAGG00000010067	GPATCH1	91	51.832	Gopherus_agassizii
ENSDARG00000033418	gpatch1	89	50.859	ENSGGOG00000010862	GPATCH1	90	50.113	Gorilla_gorilla
ENSDARG00000033418	gpatch1	81	62.701	ENSHBUG00000023462	gpatch1	90	59.255	Haplochromis_burtoni
ENSDARG00000033418	gpatch1	92	51.160	ENSHGLG00000009334	GPATCH1	95	48.148	Heterocephalus_glaber_female
ENSDARG00000033418	gpatch1	92	51.050	ENSHGLG00100018074	GPATCH1	90	49.778	Heterocephalus_glaber_male
ENSDARG00000033418	gpatch1	100	62.588	ENSIPUG00000014977	gpatch1	91	64.906	Ictalurus_punctatus
ENSDARG00000033418	gpatch1	92	51.160	ENSSTOG00000003720	GPATCH1	81	54.224	Ictidomys_tridecemlineatus
ENSDARG00000033418	gpatch1	91	51.325	ENSJJAG00000023765	Gpatch1	81	53.652	Jaculus_jaculus
ENSDARG00000033418	gpatch1	81	59.433	ENSKMAG00000017950	gpatch1	90	56.087	Kryptolebias_marmoratus
ENSDARG00000033418	gpatch1	81	60.025	ENSLBEG00000026527	gpatch1	88	57.001	Labrus_bergylta
ENSDARG00000033418	gpatch1	89	53.281	ENSLACG00000008130	GPATCH1	89	52.941	Latimeria_chalumnae
ENSDARG00000033418	gpatch1	99	56.024	ENSLOCG00000001800	gpatch1	89	58.158	Lepisosteus_oculatus
ENSDARG00000033418	gpatch1	92	50.991	ENSLAFG00000013589	GPATCH1	90	50.110	Loxodonta_africana
ENSDARG00000033418	gpatch1	92	51.160	ENSMFAG00000034418	GPATCH1	75	77.083	Macaca_fascicularis
ENSDARG00000033418	gpatch1	95	49.577	ENSMMUG00000011790	GPATCH1	75	76.042	Macaca_mulatta
ENSDARG00000033418	gpatch1	92	50.939	ENSMNEG00000045084	GPATCH1	75	76.042	Macaca_nemestrina
ENSDARG00000033418	gpatch1	92	43.646	ENSMLEG00000043840	GPATCH1	89	43.077	Mandrillus_leucophaeus
ENSDARG00000033418	gpatch1	91	51.670	ENSMGAG00000005775	GPATCH1	89	51.225	Meleagris_gallopavo
ENSDARG00000033418	gpatch1	92	45.585	ENSMICG00000004829	GPATCH1	93	45.475	Microcebus_murinus
ENSDARG00000033418	gpatch1	92	50.710	ENSMOCG00000000174	Gpatch1	91	50.386	Microtus_ochrogaster
ENSDARG00000033418	gpatch1	92	52.948	ENSMODG00000012226	GPATCH1	93	51.554	Monodelphis_domestica
ENSDARG00000033418	gpatch1	99	53.525	ENSMALG00000014386	gpatch1	90	56.707	Monopterus_albus
ENSDARG00000033418	gpatch1	93	51.078	ENSMUSG00000063808	Gpatch1	98	75.000	Mus_musculus
ENSDARG00000033418	gpatch1	93	51.023	MGP_PahariEiJ_G0012816	Gpatch1	98	76.042	Mus_pahari
ENSDARG00000033418	gpatch1	81	54.293	MGP_SPRETEiJ_G0030681	Gpatch1	98	76.042	Mus_spretus
ENSDARG00000033418	gpatch1	92	51.378	ENSMPUG00000007658	GPATCH1	90	50.329	Mustela_putorius_furo
ENSDARG00000033418	gpatch1	92	51.435	ENSMLUG00000012161	GPATCH1	90	50.662	Myotis_lucifugus
ENSDARG00000033418	gpatch1	92	50.552	ENSNGAG00000012455	Gpatch1	90	51.613	Nannospalax_galili
ENSDARG00000033418	gpatch1	92	50.385	ENSNLEG00000007659	GPATCH1	75	76.042	Nomascus_leucogenys
ENSDARG00000033418	gpatch1	75	48.856	ENSMEUG00000015174	GPATCH1	76	48.579	Notamacropus_eugenii
ENSDARG00000033418	gpatch1	91	50.111	ENSODEG00000007103	GPATCH1	90	48.783	Octodon_degus
ENSDARG00000033418	gpatch1	91	58.681	ENSONIG00000003302	gpatch1	99	54.755	Oreochromis_niloticus
ENSDARG00000033418	gpatch1	99	49.899	ENSOANG00000012732	GPATCH1	99	50.050	Ornithorhynchus_anatinus
ENSDARG00000033418	gpatch1	91	52.567	ENSOCUG00000015905	GPATCH1	90	52.106	Oryctolagus_cuniculus
ENSDARG00000033418	gpatch1	81	60.176	ENSORLG00000018706	gpatch1	80	58.882	Oryzias_latipes
ENSDARG00000033418	gpatch1	72	62.151	ENSOMEG00000022688	gpatch1	82	59.574	Oryzias_melastigma
ENSDARG00000033418	gpatch1	81	54.843	ENSOGAG00000004016	GPATCH1	96	54.293	Otolemur_garnettii
ENSDARG00000033418	gpatch1	80	54.534	ENSOARG00000004365	GPATCH1	81	54.282	Ovis_aries
ENSDARG00000033418	gpatch1	92	50.945	ENSPPAG00000020990	GPATCH1	75	75.258	Pan_paniscus
ENSDARG00000033418	gpatch1	92	50.667	ENSPPRG00000017245	GPATCH1	90	50.055	Panthera_pardus
ENSDARG00000033418	gpatch1	92	51.111	ENSPTIG00000019649	GPATCH1	90	50.497	Panthera_tigris_altaica
ENSDARG00000033418	gpatch1	92	50.834	ENSPTRG00000010803	GPATCH1	75	76.042	Pan_troglodytes
ENSDARG00000033418	gpatch1	96	50.160	ENSPANG00000012374	GPATCH1	75	77.083	Papio_anubis
ENSDARG00000033418	gpatch1	80	63.739	ENSPKIG00000020745	gpatch1	77	64.061	Paramormyrops_kingsleyae
ENSDARG00000033418	gpatch1	92	52.179	ENSPSIG00000013433	GPATCH1	90	51.987	Pelodiscus_sinensis
ENSDARG00000033418	gpatch1	92	50.993	ENSPEMG00000000636	Gpatch1	90	50.943	Peromyscus_maniculatus_bairdii
ENSDARG00000033418	gpatch1	92	52.678	ENSPCIG00000021003	GPATCH1	95	51.799	Phascolarctos_cinereus
ENSDARG00000033418	gpatch1	69	53.690	ENSPREG00000008264	gpatch1	80	53.401	Poecilia_reticulata
ENSDARG00000033418	gpatch1	92	48.950	ENSPPYG00000009824	GPATCH1	90	48.352	Pongo_abelii
ENSDARG00000033418	gpatch1	85	47.863	ENSPCAG00000005931	GPATCH1	91	48.295	Procavia_capensis
ENSDARG00000033418	gpatch1	93	49.511	ENSPCOG00000009674	GPATCH1	95	49.063	Propithecus_coquereli
ENSDARG00000033418	gpatch1	75	53.794	ENSPVAG00000017767	GPATCH1	76	53.117	Pteropus_vampyrus
ENSDARG00000033418	gpatch1	81	63.060	ENSPNYG00000018189	gpatch1	99	55.289	Pundamilia_nyererei
ENSDARG00000033418	gpatch1	93	66.165	ENSPNAG00000013187	gpatch1	91	66.232	Pygocentrus_nattereri
ENSDARG00000033418	gpatch1	93	50.436	ENSRNOG00000011584	Gpatch1	81	53.797	Rattus_norvegicus
ENSDARG00000033418	gpatch1	99	46.083	ENSRBIG00000034723	GPATCH1	99	44.970	Rhinopithecus_bieti
ENSDARG00000033418	gpatch1	92	51.279	ENSRROG00000024428	GPATCH1	75	76.042	Rhinopithecus_roxellana
ENSDARG00000033418	gpatch1	92	51.106	ENSSBOG00000034650	GPATCH1	90	50.605	Saimiri_boliviensis_boliviensis
ENSDARG00000033418	gpatch1	93	51.571	ENSSHAG00000016016	GPATCH1	93	51.007	Sarcophilus_harrisii
ENSDARG00000033418	gpatch1	81	63.670	ENSSFOG00015011535	gpatch1	89	59.560	Scleropages_formosus
ENSDARG00000033418	gpatch1	99	52.738	ENSSMAG00000002883	gpatch1	93	54.795	Scophthalmus_maximus
ENSDARG00000033418	gpatch1	81	60.471	ENSSDUG00000007444	gpatch1	89	57.563	Seriola_dumerili
ENSDARG00000033418	gpatch1	81	61.557	ENSSLDG00000002856	gpatch1	89	61.111	Seriola_lalandi_dorsalis
ENSDARG00000033418	gpatch1	69	58.519	ENSSARG00000004108	GPATCH1	70	58.667	Sorex_araneus
ENSDARG00000033418	gpatch1	93	50.758	ENSSSCG00000002865	GPATCH1	95	50.108	Sus_scrofa
ENSDARG00000033418	gpatch1	93	51.034	ENSTGUG00000009401	GPATCH1	90	51.114	Taeniopygia_guttata
ENSDARG00000033418	gpatch1	81	57.412	ENSTRUG00000005785	-	89	53.591	Takifugu_rubripes
ENSDARG00000033418	gpatch1	81	57.286	ENSTRUG00000025081	gpatch1	89	53.481	Takifugu_rubripes
ENSDARG00000033418	gpatch1	81	55.886	ENSTNIG00000002554	gpatch1	97	56.064	Tetraodon_nigroviridis
ENSDARG00000033418	gpatch1	54	80.000	ENSTBEG00000007750	-	79	49.419	Tupaia_belangeri
ENSDARG00000033418	gpatch1	85	61.786	ENSTTRG00000012221	GPATCH1	81	47.985	Tursiops_truncatus
ENSDARG00000033418	gpatch1	95	49.948	ENSUMAG00000014645	GPATCH1	77	76.042	Ursus_maritimus
ENSDARG00000033418	gpatch1	81	67.241	ENSVPAG00000010313	GPATCH1	84	67.403	Vicugna_pacos
ENSDARG00000033418	gpatch1	95	50.857	ENSVVUG00000016572	GPATCH1	90	50.939	Vulpes_vulpes
ENSDARG00000033418	gpatch1	99	44.478	ENSXETG00000018276	gpatch1	99	46.612	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006397	mRNA processing	-	IEA	Process