EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000033596 (Gene tree)
Gene ID
334669
Gene Symbol
polr2c
Alias
wu:fk48d01
Full Name
polymerase (RNA) II (DNA directed) polypeptide C
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
9343 bases
Position
chr25:14369493-14378835
Accession
ZDB-GENE-030131-6609
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000043811RNA_pol_A_bacPF01000.261.4e-3711
ENSDARP00000043811RNA_pol_LPF01193.242.3e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000144414-1472--- (aa)--
ENSDART00000043812-1387-ENSDARP00000043811275 (aa)-Q7ZV11
Gene Model
Click here to download ENSDARG00000033596's gene model file
Pathways
Pathway IDPathway NameSource
dre03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000033596's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000033596polr2c10089.818ENSG00000102978POLR2C10089.818Homo_sapiens
ENSDARG00000033596polr2c6732.308ENSG00000171453POLR1C7535.417Homo_sapiens
ENSDARG00000033596polr2c10095.273ENSAPOG00000011708polr2c10095.273Acanthochromis_polyacanthus
ENSDARG00000033596polr2c10090.182ENSAMEG00000017026POLR2C10090.182Ailuropoda_melanoleuca
ENSDARG00000033596polr2c10094.909ENSACIG00000012060polr2c10094.909Amphilophus_citrinellus
ENSDARG00000033596polr2c10095.273ENSAOCG00000015665polr2c10095.273Amphiprion_ocellaris
ENSDARG00000033596polr2c8995.122ENSAOCG00000018000-9395.122Amphiprion_ocellaris
ENSDARG00000033596polr2c10095.273ENSAOCG00000010477-10095.273Amphiprion_ocellaris
ENSDARG00000033596polr2c10095.273ENSAPEG00000007221polr2c10095.273Amphiprion_percula
ENSDARG00000033596polr2c10096.364ENSATEG00000007143polr2c10096.364Anabas_testudineus
ENSDARG00000033596polr2c9886.617ENSAPLG00000005385POLR2C9886.617Anas_platyrhynchos
ENSDARG00000033596polr2c10091.273ENSACAG00000007514-10091.273Anolis_carolinensis
ENSDARG00000033596polr2c8370.044ENSACAG00000011302-10070.044Anolis_carolinensis
ENSDARG00000033596polr2c6130.899ENSANAG00000025805POLR1C5930.899Aotus_nancymaae
ENSDARG00000033596polr2c10089.818ENSANAG00000005302POLR2C10089.818Aotus_nancymaae
ENSDARG00000033596polr2c10094.182ENSACLG00000004854polr2c10094.182Astatotilapia_calliptera
ENSDARG00000033596polr2c10096.364ENSAMXG00000012805polr2c10096.364Astyanax_mexicanus
ENSDARG00000033596polr2c10090.182ENSBTAG00000001856POLR2C10090.182Bos_taurus
ENSDARG00000033596polr2c9853.791WBGene00007971rpb-39853.791Caenorhabditis_elegans
ENSDARG00000033596polr2c6130.899ENSCJAG00000005594POLR1C5930.899Callithrix_jacchus
ENSDARG00000033596polr2c10089.818ENSCJAG00000012016POLR2C10089.818Callithrix_jacchus
ENSDARG00000033596polr2c10090.182ENSCAFG00000008720POLR2C10090.182Canis_familiaris
ENSDARG00000033596polr2c10090.182ENSCAFG00020007660POLR2C10090.182Canis_lupus_dingo
ENSDARG00000033596polr2c10090.182ENSCHIG00000012072POLR2C10090.182Capra_hircus
ENSDARG00000033596polr2c10088.364ENSTSYG00000011076POLR2C10088.364Carlito_syrichta
ENSDARG00000033596polr2c6130.899ENSTSYG00000011921POLR1C5930.899Carlito_syrichta
ENSDARG00000033596polr2c6990.000ENSCAPG00000006608POLR2C8290.000Cavia_aperea
ENSDARG00000033596polr2c10090.182ENSCPOG00000004554POLR2C10090.182Cavia_porcellus
ENSDARG00000033596polr2c10089.818ENSCCAG00000035768POLR2C10089.818Cebus_capucinus
ENSDARG00000033596polr2c10089.818ENSCATG00000040803POLR2C10089.818Cercocebus_atys
ENSDARG00000033596polr2c6731.282ENSCATG00000044045POLR1C5932.022Cercocebus_atys
ENSDARG00000033596polr2c10090.182ENSCLAG00000013676POLR2C10090.182Chinchilla_lanigera
ENSDARG00000033596polr2c10089.818ENSCSAG00000004901POLR2C10089.818Chlorocebus_sabaeus
ENSDARG00000033596polr2c10082.909ENSCHOG00000002986POLR2C10082.909Choloepus_hoffmanni
ENSDARG00000033596polr2c8991.870ENSCPBG00000022758POLR2C9391.870Chrysemys_picta_bellii
ENSDARG00000033596polr2c5466.887ENSCING00000009812-10066.887Ciona_intestinalis
ENSDARG00000033596polr2c9562.544ENSCING00000021895-9962.544Ciona_intestinalis
ENSDARG00000033596polr2c6833.166ENSCING00000003563-5533.166Ciona_intestinalis
ENSDARG00000033596polr2c10067.148ENSCSAVG00000002167-10067.148Ciona_savignyi
ENSDARG00000033596polr2c10089.818ENSCANG00000034876POLR2C10089.818Colobus_angolensis_palliatus
ENSDARG00000033596polr2c6732.308ENSCANG00000043167POLR1C5931.461Colobus_angolensis_palliatus
ENSDARG00000033596polr2c10089.818ENSCGRG00001019477Polr2c10089.818Cricetulus_griseus_chok1gshd
ENSDARG00000033596polr2c10089.818ENSCGRG00000013273Polr2c10089.818Cricetulus_griseus_crigri
ENSDARG00000033596polr2c10095.273ENSCSEG00000001719polr2c10095.273Cynoglossus_semilaevis
ENSDARG00000033596polr2c7496.552ENSCVAG00000017931polr2c8296.552Cyprinodon_variegatus
ENSDARG00000033596polr2c10095.273ENSCVAG00000004718-10095.273Cyprinodon_variegatus
ENSDARG00000033596polr2c9457.634ENSDNOG00000036028-9957.634Dasypus_novemcinctus
ENSDARG00000033596polr2c10090.545ENSDNOG00000030752-8190.545Dasypus_novemcinctus
ENSDARG00000033596polr2c10090.182ENSDORG00000000081Polr2c10090.182Dipodomys_ordii
ENSDARG00000033596polr2c9966.909FBgn0026373RpII3310066.909Drosophila_melanogaster
ENSDARG00000033596polr2c10074.182ENSETEG00000004185POLR2C10074.182Echinops_telfairi
ENSDARG00000033596polr2c6731.795ENSETEG00000010807POLR1C5531.795Echinops_telfairi
ENSDARG00000033596polr2c10075.273ENSEBUG00000016262polr2c10075.273Eptatretus_burgeri
ENSDARG00000033596polr2c10089.818ENSEASG00005005406POLR2C10089.818Equus_asinus_asinus
ENSDARG00000033596polr2c10090.182ENSECAG00000015818POLR2C10090.182Equus_caballus
ENSDARG00000033596polr2c10075.636ENSEEUG00000003658POLR2C10075.636Erinaceus_europaeus
ENSDARG00000033596polr2c10093.091ENSELUG00000012259polr2c10093.091Esox_lucius
ENSDARG00000033596polr2c10090.182ENSFCAG00000034622POLR2C10090.182Felis_catus
ENSDARG00000033596polr2c10091.273ENSFALG00000006931POLR2C10091.273Ficedula_albicollis
ENSDARG00000033596polr2c10087.273ENSFDAG00000008641POLR2C10087.273Fukomys_damarensis
ENSDARG00000033596polr2c10096.000ENSFHEG00000020739polr2c10096.000Fundulus_heteroclitus
ENSDARG00000033596polr2c10094.909ENSGMOG00000004203polr2c10094.909Gadus_morhua
ENSDARG00000033596polr2c10091.273ENSGALG00000001168POLR2C10091.273Gallus_gallus
ENSDARG00000033596polr2c10096.000ENSGAFG00000021951polr2c10096.000Gambusia_affinis
ENSDARG00000033596polr2c10095.273ENSGACG00000002194polr2c10095.273Gasterosteus_aculeatus
ENSDARG00000033596polr2c8991.870ENSGAGG00000016942POLR2C8891.870Gopherus_agassizii
ENSDARG00000033596polr2c10089.818ENSGGOG00000012415POLR2C10089.818Gorilla_gorilla
ENSDARG00000033596polr2c6732.308ENSGGOG00000010903POLR1C5931.461Gorilla_gorilla
ENSDARG00000033596polr2c10094.182ENSHBUG00000023040polr2c10094.182Haplochromis_burtoni
ENSDARG00000033596polr2c10090.182ENSHGLG00000013465POLR2C10090.182Heterocephalus_glaber_female
ENSDARG00000033596polr2c10090.182ENSHGLG00100011949POLR2C10090.182Heterocephalus_glaber_male
ENSDARG00000033596polr2c10092.364ENSHCOG00000007066polr2c10092.364Hippocampus_comes
ENSDARG00000033596polr2c10096.364ENSIPUG00000009231polr2c10096.364Ictalurus_punctatus
ENSDARG00000033596polr2c10076.364ENSSTOG00000031354-10076.364Ictidomys_tridecemlineatus
ENSDARG00000033596polr2c10090.182ENSSTOG00000015150-10090.182Ictidomys_tridecemlineatus
ENSDARG00000033596polr2c10089.818ENSJJAG00000023057Polr2c10089.818Jaculus_jaculus
ENSDARG00000033596polr2c10095.636ENSKMAG00000016196polr2c10095.636Kryptolebias_marmoratus
ENSDARG00000033596polr2c10094.545ENSLBEG00000007369polr2c10094.545Labrus_bergylta
ENSDARG00000033596polr2c10074.534ENSLACG00000003703POLR2C9974.534Latimeria_chalumnae
ENSDARG00000033596polr2c10095.636ENSLOCG00000003215polr2c10095.636Lepisosteus_oculatus
ENSDARG00000033596polr2c7530.973ENSLOCG00000016710polr1c5630.973Lepisosteus_oculatus
ENSDARG00000033596polr2c10089.455ENSLAFG00000027230POLR2C10089.455Loxodonta_africana
ENSDARG00000033596polr2c6731.282ENSMFAG00000046295POLR1C5932.022Macaca_fascicularis
ENSDARG00000033596polr2c10089.818ENSMFAG00000016861POLR2C10089.818Macaca_fascicularis
ENSDARG00000033596polr2c10089.818ENSMMUG00000020474POLR2C10089.818Macaca_mulatta
ENSDARG00000033596polr2c6731.282ENSMMUG00000015192POLR1C5932.022Macaca_mulatta
ENSDARG00000033596polr2c10089.818ENSMNEG00000033565POLR2C10089.818Macaca_nemestrina
ENSDARG00000033596polr2c6731.282ENSMNEG00000028073POLR1C5932.022Macaca_nemestrina
ENSDARG00000033596polr2c10089.818ENSMLEG00000032412POLR2C10089.818Mandrillus_leucophaeus
ENSDARG00000033596polr2c6731.282ENSMLEG00000034818POLR1C5931.282Mandrillus_leucophaeus
ENSDARG00000033596polr2c10096.364ENSMAMG00000013205polr2c10096.364Mastacembelus_armatus
ENSDARG00000033596polr2c10094.182ENSMZEG00005015329polr2c10094.182Maylandia_zebra
ENSDARG00000033596polr2c10081.091ENSMAUG00000000779-10081.091Mesocricetus_auratus
ENSDARG00000033596polr2c9774.627ENSMAUG00000019031-10074.627Mesocricetus_auratus
ENSDARG00000033596polr2c10089.818ENSMICG00000045178POLR2C10089.818Microcebus_murinus
ENSDARG00000033596polr2c6731.795ENSMICG00000005027POLR1C6231.795Microcebus_murinus
ENSDARG00000033596polr2c10087.636ENSMOCG00000013652Polr2c10087.636Microtus_ochrogaster
ENSDARG00000033596polr2c10096.000ENSMMOG00000010560polr2c10096.000Mola_mola
ENSDARG00000033596polr2c9030.137ENSMODG00000018964POLR1C9830.137Monodelphis_domestica
ENSDARG00000033596polr2c10090.182ENSMODG00000013540POLR2C10090.182Monodelphis_domestica
ENSDARG00000033596polr2c10096.364ENSMALG00000004581polr2c10096.364Monopterus_albus
ENSDARG00000033596polr2c10089.818MGP_CAROLIEiJ_G0031409Polr2c10089.818Mus_caroli
ENSDARG00000033596polr2c10089.818ENSMUSG00000031783Polr2c10089.818Mus_musculus
ENSDARG00000033596polr2c10089.818MGP_PahariEiJ_G0023007Polr2c10089.818Mus_pahari
ENSDARG00000033596polr2c10089.818MGP_SPRETEiJ_G0032528Polr2c10089.818Mus_spretus
ENSDARG00000033596polr2c10090.182ENSMPUG00000004483POLR2C10090.182Mustela_putorius_furo
ENSDARG00000033596polr2c10089.818ENSMLUG00000015833-10089.818Myotis_lucifugus
ENSDARG00000033596polr2c10087.636ENSMLUG00000029495-10087.636Myotis_lucifugus
ENSDARG00000033596polr2c10089.818ENSMLUG00000025422-10089.818Myotis_lucifugus
ENSDARG00000033596polr2c7187.629ENSMLUG00000023530-10087.629Myotis_lucifugus
ENSDARG00000033596polr2c10067.273ENSNGAG00000010540-10067.273Nannospalax_galili
ENSDARG00000033596polr2c10090.182ENSNGAG00000012249-10090.182Nannospalax_galili
ENSDARG00000033596polr2c6693.750ENSNBRG00000003952polr2c9493.750Neolamprologus_brichardi
ENSDARG00000033596polr2c6732.308ENSNLEG00000004035POLR1C5632.308Nomascus_leucogenys
ENSDARG00000033596polr2c10076.727ENSNLEG00000003034POLR2C10076.727Nomascus_leucogenys
ENSDARG00000033596polr2c6030.508ENSMEUG00000006778POLR1C5030.508Notamacropus_eugenii
ENSDARG00000033596polr2c10083.636ENSMEUG00000014741POLR2C10083.636Notamacropus_eugenii
ENSDARG00000033596polr2c10085.455ENSOPRG00000006979POLR2C10085.455Ochotona_princeps
ENSDARG00000033596polr2c10090.182ENSODEG00000016934POLR2C10090.182Octodon_degus
ENSDARG00000033596polr2c10094.182ENSONIG00000010914polr2c10094.182Oreochromis_niloticus
ENSDARG00000033596polr2c8491.304ENSOANG00000009337POLR2C10091.304Ornithorhynchus_anatinus
ENSDARG00000033596polr2c10089.455ENSOCUG00000014984POLR2C10089.455Oryctolagus_cuniculus
ENSDARG00000033596polr2c10096.000ENSORLG00000015108polr2c10096.000Oryzias_latipes
ENSDARG00000033596polr2c10095.636ENSORLG00020013566polr2c10095.636Oryzias_latipes_hni
ENSDARG00000033596polr2c10096.000ENSORLG00015003751polr2c10096.000Oryzias_latipes_hsok
ENSDARG00000033596polr2c10096.000ENSOMEG00000019444polr2c10096.000Oryzias_melastigma
ENSDARG00000033596polr2c10089.818ENSOGAG00000016866POLR2C10089.818Otolemur_garnettii
ENSDARG00000033596polr2c9951.825ENSOGAG00000029610-10051.825Otolemur_garnettii
ENSDARG00000033596polr2c10090.182ENSOARG00000000302POLR2C10090.182Ovis_aries
ENSDARG00000033596polr2c10085.091ENSPPAG00000042822POLR2C10085.091Pan_paniscus
ENSDARG00000033596polr2c6732.308ENSPPAG00000043678POLR1C5931.461Pan_paniscus
ENSDARG00000033596polr2c10090.182ENSPPRG00000003215POLR2C10090.182Panthera_pardus
ENSDARG00000033596polr2c9784.586ENSPTIG00000010297POLR2C9784.586Panthera_tigris_altaica
ENSDARG00000033596polr2c10089.818ENSPTRG00000008157POLR2C10089.818Pan_troglodytes
ENSDARG00000033596polr2c6732.308ENSPTRG00000018202POLR1C5931.461Pan_troglodytes
ENSDARG00000033596polr2c6732.821ENSPANG00000009025POLR1C5932.821Papio_anubis
ENSDARG00000033596polr2c10089.818ENSPANG00000006264POLR2C10089.818Papio_anubis
ENSDARG00000033596polr2c10095.636ENSPKIG00000005228polr2c10095.636Paramormyrops_kingsleyae
ENSDARG00000033596polr2c8991.870ENSPSIG00000016112POLR2C9091.870Pelodiscus_sinensis
ENSDARG00000033596polr2c7593.171ENSPMGG00000021249polr2c8493.171Periophthalmus_magnuspinnatus
ENSDARG00000033596polr2c10089.818ENSPEMG00000014204Polr2c10089.818Peromyscus_maniculatus_bairdii
ENSDARG00000033596polr2c8382.895ENSPMAG00000004827polr2c10082.895Petromyzon_marinus
ENSDARG00000033596polr2c10090.182ENSPCIG00000015111POLR2C10090.182Phascolarctos_cinereus
ENSDARG00000033596polr2c7930.702ENSPCIG00000028137POLR1C5930.702Phascolarctos_cinereus
ENSDARG00000033596polr2c10096.000ENSPFOG00000024666polr2c10096.000Poecilia_formosa
ENSDARG00000033596polr2c10096.000ENSPLAG00000019750polr2c10096.000Poecilia_latipinna
ENSDARG00000033596polr2c10096.000ENSPMEG00000001741polr2c10096.000Poecilia_mexicana
ENSDARG00000033596polr2c10090.288ENSPREG00000003090polr2c10090.288Poecilia_reticulata
ENSDARG00000033596polr2c10089.818ENSPPYG00000007390POLR2C10089.818Pongo_abelii
ENSDARG00000033596polr2c8389.956ENSPCAG00000002423POLR2C10089.956Procavia_capensis
ENSDARG00000033596polr2c10089.818ENSPCOG00000017282POLR2C10089.818Propithecus_coquereli
ENSDARG00000033596polr2c6130.899ENSPCOG00000024628POLR1C5930.899Propithecus_coquereli
ENSDARG00000033596polr2c10090.182ENSPVAG00000001399POLR2C10090.182Pteropus_vampyrus
ENSDARG00000033596polr2c10094.182ENSPNYG00000003756polr2c10094.182Pundamilia_nyererei
ENSDARG00000033596polr2c8730.216ENSPNAG00000008443polr1c7930.216Pygocentrus_nattereri
ENSDARG00000033596polr2c10096.727ENSPNAG00000012133polr2c10096.727Pygocentrus_nattereri
ENSDARG00000033596polr2c10089.818ENSRNOG00000015720Polr2c10089.818Rattus_norvegicus
ENSDARG00000033596polr2c6732.308ENSRBIG00000007155POLR1C5832.308Rhinopithecus_bieti
ENSDARG00000033596polr2c10089.818ENSRBIG00000026549POLR2C10089.818Rhinopithecus_bieti
ENSDARG00000033596polr2c10089.818ENSRROG00000045745POLR2C10089.818Rhinopithecus_roxellana
ENSDARG00000033596polr2c6732.308ENSRROG00000000257POLR1C5931.461Rhinopithecus_roxellana
ENSDARG00000033596polr2c9644.444YIL021WRPB38344.444Saccharomyces_cerevisiae
ENSDARG00000033596polr2c6732.308ENSSBOG00000025735POLR1C6232.308Saimiri_boliviensis_boliviensis
ENSDARG00000033596polr2c10089.818ENSSBOG00000030004POLR2C10089.818Saimiri_boliviensis_boliviensis
ENSDARG00000033596polr2c10095.636ENSSFOG00015023460polr2c10095.636Scleropages_formosus
ENSDARG00000033596polr2c10094.545ENSSMAG00000002827polr2c8194.545Scophthalmus_maximus
ENSDARG00000033596polr2c10096.364ENSSDUG00000003354polr2c10096.364Seriola_dumerili
ENSDARG00000033596polr2c10096.364ENSSLDG00000003555polr2c10096.364Seriola_lalandi_dorsalis
ENSDARG00000033596polr2c5764.103ENSSARG00000001565-10064.103Sorex_araneus
ENSDARG00000033596polr2c10090.182ENSSPUG00000012934POLR2C10090.182Sphenodon_punctatus
ENSDARG00000033596polr2c10095.273ENSSPAG00000005108polr2c10095.273Stegastes_partitus
ENSDARG00000033596polr2c10089.818ENSSSCG00000025454POLR2C10089.818Sus_scrofa
ENSDARG00000033596polr2c10091.273ENSTGUG00000004996POLR2C10091.273Taeniopygia_guttata
ENSDARG00000033596polr2c10094.182ENSTRUG00000004676polr2c10094.182Takifugu_rubripes
ENSDARG00000033596polr2c10094.182ENSTNIG00000008851polr2c10094.182Tetraodon_nigroviridis
ENSDARG00000033596polr2c10088.727ENSTBEG00000009442POLR2C10088.727Tupaia_belangeri
ENSDARG00000033596polr2c8391.266ENSTTRG00000010060POLR2C10091.266Tursiops_truncatus
ENSDARG00000033596polr2c10090.182ENSUAMG00000014170POLR2C10090.182Ursus_americanus
ENSDARG00000033596polr2c9189.200ENSUMAG00000021686POLR2C9689.200Ursus_maritimus
ENSDARG00000033596polr2c6782.065ENSVPAG00000007590POLR2C10082.065Vicugna_pacos
ENSDARG00000033596polr2c5288.811ENSVVUG00000003058-9388.811Vulpes_vulpes
ENSDARG00000033596polr2c10084.364ENSVVUG00000023516-10084.364Vulpes_vulpes
ENSDARG00000033596polr2c6130.337ENSVVUG00000028922POLR1C5930.337Vulpes_vulpes
ENSDARG00000033596polr2c10078.909ENSXETG00000013784polr2c10078.909Xenopus_tropicalis
ENSDARG00000033596polr2c10096.000ENSXCOG00000020734polr2c10096.000Xiphophorus_couchianus
ENSDARG00000033596polr2c10096.000ENSXMAG00000015984polr2c10096.000Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001055RNA polymerase II activity21873635.IBAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity-IEAFunction
GO:0005665RNA polymerase II, core complex21873635.IBAComponent
GO:0006351transcription, DNA-templated-IEAProcess
GO:0046983protein dimerization activity-IEAFunction

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