EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000034210 (Gene tree)
Gene ID: 555536
Gene Symbol: si:dkey-240h12.4
Alias: -
Full Name: si:dkey-240h12.4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 41536 bases
Position: chr19:11167289-11208824
Accession: ZDB-GENE-070705-406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000151093	RIO1	PF01163.22	0.00048	1	1
ENSDARP00000044425	RIO1	PF01163.22	0.00049	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000044426	-	1859	XM_021468288	ENSDARP00000044425	361 (aa)	XP_021323963	F1QN42
ENSDART00000189754	-	1311	-	ENSDARP00000151093	352 (aa)	-	A0A2R8QC51

Gene Model

Click here to download ENSDARG00000034210's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000034210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000034210	si:dkey-240h12.4	73	32.197	ENSDARG00000019345	mark3a	50	32.197
ENSDARG00000034210	si:dkey-240h12.4	99	51.507	ENSDARG00000103666	dapk2b	94	52.436
ENSDARG00000034210	si:dkey-240h12.4	77	31.136	ENSDARG00000044436	rps6ka4	73	31.136
ENSDARG00000034210	si:dkey-240h12.4	73	35.606	ENSDARG00000090179	si:ch211-117c9.1	88	35.606
ENSDARG00000034210	si:dkey-240h12.4	98	47.911	ENSDARG00000074447	dapk3	62	56.184
ENSDARG00000034210	si:dkey-240h12.4	88	37.539	ENSDARG00000044526	camk1ga	72	37.539
ENSDARG00000034210	si:dkey-240h12.4	86	52.848	ENSDARG00000061096	dapk2a	65	52.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000034210	si:dkey-240h12.4	66	68.750	ENSACAG00000005337	-	97	67.857	Anolis_carolinensis
ENSDARG00000034210	si:dkey-240h12.4	100	77.285	ENSAMXG00000035647	si:dkey-240h12.4	97	76.857	Astyanax_mexicanus
ENSDARG00000034210	si:dkey-240h12.4	52	66.486	ENSFHEG00000017947	si:dkey-240h12.4	92	66.486	Fundulus_heteroclitus
ENSDARG00000034210	si:dkey-240h12.4	97	72.571	ENSLBEG00000000182	-	97	72.571	Labrus_bergylta
ENSDARG00000034210	si:dkey-240h12.4	100	62.881	ENSLACG00000015056	si:dkey-240h12.4	96	62.571	Latimeria_chalumnae
ENSDARG00000034210	si:dkey-240h12.4	97	79.202	ENSPKIG00000015179	si:dkey-240h12.4	97	79.656	Paramormyrops_kingsleyae
ENSDARG00000034210	si:dkey-240h12.4	97	70.857	ENSPFOG00000016522	si:dkey-240h12.4	97	70.857	Poecilia_formosa
ENSDARG00000034210	si:dkey-240h12.4	87	71.975	ENSPLAG00000002519	si:dkey-240h12.4	100	71.975	Poecilia_latipinna
ENSDARG00000034210	si:dkey-240h12.4	100	77.008	ENSPNAG00000010456	-	97	76.571	Pygocentrus_nattereri
ENSDARG00000034210	si:dkey-240h12.4	97	79.714	ENSSFOG00015020846	si:dkey-240h12.4	97	79.714	Scleropages_formosus
ENSDARG00000034210	si:dkey-240h12.4	94	52.113	ENSSPUG00000001082	-	86	51.453	Sphenodon_punctatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function