EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000034396 (Gene tree)
Gene ID: 338183
Gene Symbol: mars
Alias: id:ibd5106
Full Name: methionyl-tRNA synthetase
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 53780 bases
Position: chr6:58921240-58975019
Accession: ZDB-GENE-030219-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000122981	tRNA-synt_1g	PF09334.11	1.9e-150	1	1
ENSDARP00000123109	tRNA-synt_1g	PF09334.11	2e-150	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144514	-	3147	-	ENSDARP00000122981	942 (aa)	-	F1QVW1
ENSDART00000144911	-	3165	-	ENSDARP00000123109	951 (aa)	-	F1QFL1

Gene Model

Click here to download ENSDARG00000034396's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00450	Selenocompound metabolism	KEGG
dre00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000034396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000034396	mars	97	63.716	ENSG00000166986	MARS	91	73.585	Homo_sapiens
ENSDARG00000034396	mars	97	73.203	ENSAPOG00000020238	mars	99	73.203	Acanthochromis_polyacanthus
ENSDARG00000034396	mars	97	64.481	ENSAMEG00000004962	MARS	100	64.809	Ailuropoda_melanoleuca
ENSDARG00000034396	mars	99	71.822	ENSACIG00000016271	mars	100	75.794	Amphilophus_citrinellus
ENSDARG00000034396	mars	97	73.529	ENSAOCG00000011411	mars	99	73.529	Amphiprion_ocellaris
ENSDARG00000034396	mars	97	73.312	ENSAPEG00000008610	mars	99	73.312	Amphiprion_percula
ENSDARG00000034396	mars	97	72.096	ENSATEG00000025019	mars	100	72.373	Anabas_testudineus
ENSDARG00000034396	mars	90	66.667	ENSAPLG00000014821	MARS	100	67.016	Anas_platyrhynchos
ENSDARG00000034396	mars	96	61.868	ENSACAG00000006698	MARS	99	61.868	Anolis_carolinensis
ENSDARG00000034396	mars	97	63.716	ENSANAG00000027589	MARS	100	63.716	Aotus_nancymaae
ENSDARG00000034396	mars	97	72.470	ENSACLG00000018937	mars	100	72.579	Astatotilapia_calliptera
ENSDARG00000034396	mars	97	77.081	ENSAMXG00000017335	mars	94	77.081	Astyanax_mexicanus
ENSDARG00000034396	mars	97	63.388	ENSBTAG00000018405	MARS	100	63.388	Bos_taurus
ENSDARG00000034396	mars	70	55.322	WBGene00003415	mars-1	87	59.052	Caenorhabditis_elegans
ENSDARG00000034396	mars	97	63.607	ENSCJAG00000007249	MARS	100	63.607	Callithrix_jacchus
ENSDARG00000034396	mars	97	63.607	ENSCAFG00000000229	MARS	100	63.607	Canis_familiaris
ENSDARG00000034396	mars	97	63.607	ENSCAFG00020023661	MARS	100	63.607	Canis_lupus_dingo
ENSDARG00000034396	mars	97	63.279	ENSCHIG00000027023	MARS	100	63.279	Capra_hircus
ENSDARG00000034396	mars	97	63.934	ENSTSYG00000005193	MARS	100	63.934	Carlito_syrichta
ENSDARG00000034396	mars	78	63.087	ENSCAPG00000014448	MARS	98	63.087	Cavia_aperea
ENSDARG00000034396	mars	97	63.497	ENSCPOG00000012866	MARS	100	63.497	Cavia_porcellus
ENSDARG00000034396	mars	97	63.497	ENSCCAG00000032206	MARS	97	67.053	Cebus_capucinus
ENSDARG00000034396	mars	97	63.895	ENSCATG00000038907	MARS	99	63.895	Cercocebus_atys
ENSDARG00000034396	mars	94	64.871	ENSCLAG00000012164	MARS	100	64.871	Chinchilla_lanigera
ENSDARG00000034396	mars	97	62.975	ENSCSAG00000004852	MARS	100	62.975	Chlorocebus_sabaeus
ENSDARG00000034396	mars	97	62.555	ENSCPBG00000017136	MARS	99	62.773	Chrysemys_picta_bellii
ENSDARG00000034396	mars	70	59.545	ENSCING00000018550	-	99	58.866	Ciona_intestinalis
ENSDARG00000034396	mars	60	63.492	ENSCSAVG00000006145	-	97	63.492	Ciona_savignyi
ENSDARG00000034396	mars	97	63.716	ENSCANG00000034583	MARS	100	63.716	Colobus_angolensis_palliatus
ENSDARG00000034396	mars	97	63.934	ENSCGRG00001019238	Mars	100	63.934	Cricetulus_griseus_chok1gshd
ENSDARG00000034396	mars	97	63.934	ENSCGRG00000017321	Mars	100	63.934	Cricetulus_griseus_crigri
ENSDARG00000034396	mars	97	72.708	ENSCSEG00000010816	mars	99	73.420	Cynoglossus_semilaevis
ENSDARG00000034396	mars	97	72.678	ENSCVAG00000009314	mars	99	73.035	Cyprinodon_variegatus
ENSDARG00000034396	mars	97	63.607	ENSDNOG00000017502	MARS	100	63.607	Dasypus_novemcinctus
ENSDARG00000034396	mars	97	63.646	ENSDORG00000007127	Mars	100	63.646	Dipodomys_ordii
ENSDARG00000034396	mars	95	46.718	FBgn0034401	MetRS	85	46.688	Drosophila_melanogaster
ENSDARG00000034396	mars	59	67.800	ENSETEG00000007106	MARS	100	68.603	Echinops_telfairi
ENSDARG00000034396	mars	58	59.049	ENSEBUG00000010439	mars	87	59.049	Eptatretus_burgeri
ENSDARG00000034396	mars	97	64.520	ENSEASG00005007208	MARS	100	64.520	Equus_asinus_asinus
ENSDARG00000034396	mars	97	64.520	ENSECAG00000015175	MARS	100	64.520	Equus_caballus
ENSDARG00000034396	mars	86	62.910	ENSEEUG00000015503	MARS	89	62.910	Erinaceus_europaeus
ENSDARG00000034396	mars	97	73.089	ENSELUG00000010453	mars	100	73.089	Esox_lucius
ENSDARG00000034396	mars	97	64.262	ENSFCAG00000002083	MARS	100	64.262	Felis_catus
ENSDARG00000034396	mars	97	61.572	ENSFDAG00000010217	MARS	100	61.572	Fukomys_damarensis
ENSDARG00000034396	mars	97	72.737	ENSFHEG00000016374	mars	100	72.737	Fundulus_heteroclitus
ENSDARG00000034396	mars	97	72.440	ENSGMOG00000007987	mars	100	72.440	Gadus_morhua
ENSDARG00000034396	mars	89	63.246	ENSGALG00000039315	MARS	95	61.899	Gallus_gallus
ENSDARG00000034396	mars	97	72.065	ENSGAFG00000013461	mars	100	71.087	Gambusia_affinis
ENSDARG00000034396	mars	97	73.449	ENSGACG00000006474	mars	100	73.449	Gasterosteus_aculeatus
ENSDARG00000034396	mars	93	65.380	ENSGAGG00000011640	MARS	97	65.568	Gopherus_agassizii
ENSDARG00000034396	mars	97	63.716	ENSGGOG00000001982	MARS	100	63.716	Gorilla_gorilla
ENSDARG00000034396	mars	91	78.788	ENSHBUG00000009575	mars	98	78.788	Haplochromis_burtoni
ENSDARG00000034396	mars	97	63.646	ENSHGLG00000013493	MARS	100	63.646	Heterocephalus_glaber_female
ENSDARG00000034396	mars	94	54.719	ENSHGLG00000019739	-	95	54.831	Heterocephalus_glaber_female
ENSDARG00000034396	mars	97	63.646	ENSHGLG00100006885	MARS	100	63.646	Heterocephalus_glaber_male
ENSDARG00000034396	mars	94	53.933	ENSHGLG00100004906	-	95	54.045	Heterocephalus_glaber_male
ENSDARG00000034396	mars	97	72.964	ENSHCOG00000001090	mars	100	72.964	Hippocampus_comes
ENSDARG00000034396	mars	64	81.457	ENSIPUG00000024413	mars	98	81.457	Ictalurus_punctatus
ENSDARG00000034396	mars	87	74.848	ENSIPUG00000024410	mars	98	74.939	Ictalurus_punctatus
ENSDARG00000034396	mars	97	63.210	ENSSTOG00000001128	MARS	100	63.319	Ictidomys_tridecemlineatus
ENSDARG00000034396	mars	97	63.537	ENSJJAG00000018827	Mars	100	63.537	Jaculus_jaculus
ENSDARG00000034396	mars	97	72.688	ENSKMAG00000012408	mars	99	74.548	Kryptolebias_marmoratus
ENSDARG00000034396	mars	97	73.420	ENSLBEG00000013609	mars	100	73.420	Labrus_bergylta
ENSDARG00000034396	mars	97	65.721	ENSLACG00000018854	MARS	99	65.721	Latimeria_chalumnae
ENSDARG00000034396	mars	97	63.537	ENSLAFG00000013525	MARS	100	63.943	Loxodonta_africana
ENSDARG00000034396	mars	97	63.825	ENSMFAG00000010123	MARS	100	63.825	Macaca_fascicularis
ENSDARG00000034396	mars	97	63.716	ENSMMUG00000011277	MARS	91	73.585	Macaca_mulatta
ENSDARG00000034396	mars	97	63.169	ENSMNEG00000044464	MARS	100	63.169	Macaca_nemestrina
ENSDARG00000034396	mars	87	67.540	ENSMLEG00000034638	MARS	99	67.540	Mandrillus_leucophaeus
ENSDARG00000034396	mars	93	72.247	ENSMAMG00000010012	mars	97	72.247	Mastacembelus_armatus
ENSDARG00000034396	mars	97	72.252	ENSMZEG00005007092	mars	100	72.361	Maylandia_zebra
ENSDARG00000034396	mars	97	62.623	ENSMAUG00000011482	Mars	100	62.623	Mesocricetus_auratus
ENSDARG00000034396	mars	97	63.716	ENSMICG00000032056	MARS	100	63.716	Microcebus_murinus
ENSDARG00000034396	mars	97	64.262	ENSMOCG00000010941	Mars	100	64.262	Microtus_ochrogaster
ENSDARG00000034396	mars	97	71.554	ENSMMOG00000007461	mars	99	71.554	Mola_mola
ENSDARG00000034396	mars	97	71.382	ENSMALG00000010005	mars	99	73.068	Monopterus_albus
ENSDARG00000034396	mars	97	63.210	MGP_CAROLIEiJ_G0015891	Mars	100	63.428	Mus_caroli
ENSDARG00000034396	mars	97	63.210	ENSMUSG00000040354	Mars	100	63.428	Mus_musculus
ENSDARG00000034396	mars	97	63.210	MGP_PahariEiJ_G0031194	Mars	100	63.210	Mus_pahari
ENSDARG00000034396	mars	97	63.319	MGP_SPRETEiJ_G0016717	Mars	100	63.537	Mus_spretus
ENSDARG00000034396	mars	97	64.278	ENSMPUG00000001831	MARS	100	64.667	Mustela_putorius_furo
ENSDARG00000034396	mars	97	64.044	ENSMLUG00000001037	MARS	100	64.044	Myotis_lucifugus
ENSDARG00000034396	mars	97	63.468	ENSNGAG00000018824	Mars	100	63.468	Nannospalax_galili
ENSDARG00000034396	mars	97	65.297	ENSNBRG00000004105	mars	100	65.297	Neolamprologus_brichardi
ENSDARG00000034396	mars	97	63.825	ENSNLEG00000017297	MARS	100	63.825	Nomascus_leucogenys
ENSDARG00000034396	mars	87	64.957	ENSMEUG00000007195	MARS	100	65.066	Notamacropus_eugenii
ENSDARG00000034396	mars	97	62.295	ENSOPRG00000006518	MARS	100	62.295	Ochotona_princeps
ENSDARG00000034396	mars	97	64.044	ENSODEG00000001752	MARS	100	64.044	Octodon_degus
ENSDARG00000034396	mars	97	72.091	ENSONIG00000005090	mars	100	72.306	Oreochromis_niloticus
ENSDARG00000034396	mars	69	64.492	ENSOANG00000013318	MARS	100	64.492	Ornithorhynchus_anatinus
ENSDARG00000034396	mars	97	64.044	ENSOCUG00000007373	MARS	100	64.044	Oryctolagus_cuniculus
ENSDARG00000034396	mars	97	71.538	ENSORLG00000005405	mars	100	71.756	Oryzias_latipes
ENSDARG00000034396	mars	97	71.647	ENSORLG00020017397	mars	100	71.865	Oryzias_latipes_hni
ENSDARG00000034396	mars	97	71.429	ENSORLG00015012976	mars	100	71.647	Oryzias_latipes_hsok
ENSDARG00000034396	mars	97	72.083	ENSOMEG00000018411	mars	100	72.301	Oryzias_melastigma
ENSDARG00000034396	mars	97	63.399	ENSOGAG00000005226	MARS	100	63.399	Otolemur_garnettii
ENSDARG00000034396	mars	97	63.607	ENSOARG00000006477	MARS	100	63.607	Ovis_aries
ENSDARG00000034396	mars	97	63.380	ENSPPAG00000025147	MARS	100	63.380	Pan_paniscus
ENSDARG00000034396	mars	97	64.262	ENSPPRG00000023243	MARS	100	64.262	Panthera_pardus
ENSDARG00000034396	mars	97	64.372	ENSPTIG00000006721	MARS	100	64.372	Panthera_tigris_altaica
ENSDARG00000034396	mars	97	63.716	ENSPTRG00000005135	MARS	100	63.716	Pan_troglodytes
ENSDARG00000034396	mars	97	63.716	ENSPANG00000009140	MARS	100	63.716	Papio_anubis
ENSDARG00000034396	mars	97	72.688	ENSPKIG00000002833	mars	100	72.688	Paramormyrops_kingsleyae
ENSDARG00000034396	mars	62	58.355	ENSPSIG00000013607	MARS	99	42.616	Pelodiscus_sinensis
ENSDARG00000034396	mars	96	72.489	ENSPMGG00000014847	mars	99	72.489	Periophthalmus_magnuspinnatus
ENSDARG00000034396	mars	97	64.192	ENSPEMG00000000046	Mars	100	64.192	Peromyscus_maniculatus_bairdii
ENSDARG00000034396	mars	97	64.410	ENSPCIG00000023765	MARS	100	64.410	Phascolarctos_cinereus
ENSDARG00000034396	mars	97	72.451	ENSPFOG00000006998	mars	100	72.707	Poecilia_formosa
ENSDARG00000034396	mars	97	72.459	ENSPLAG00000017870	mars	100	72.817	Poecilia_latipinna
ENSDARG00000034396	mars	97	72.350	ENSPMEG00000008197	mars	100	72.707	Poecilia_mexicana
ENSDARG00000034396	mars	97	72.678	ENSPREG00000008123	mars	100	72.678	Poecilia_reticulata
ENSDARG00000034396	mars	97	63.716	ENSPPYG00000004691	MARS	100	63.716	Pongo_abelii
ENSDARG00000034396	mars	83	65.776	ENSPCAG00000016037	MARS	88	66.710	Procavia_capensis
ENSDARG00000034396	mars	97	63.716	ENSPCOG00000017598	MARS	100	63.716	Propithecus_coquereli
ENSDARG00000034396	mars	76	62.652	ENSPVAG00000012112	MARS	80	62.652	Pteropus_vampyrus
ENSDARG00000034396	mars	97	71.817	ENSPNYG00000013809	mars	100	71.926	Pundamilia_nyererei
ENSDARG00000034396	mars	97	78.649	ENSPNAG00000017290	mars	100	78.649	Pygocentrus_nattereri
ENSDARG00000034396	mars	97	63.865	ENSRNOG00000025459	Mars	100	63.865	Rattus_norvegicus
ENSDARG00000034396	mars	96	63.326	ENSRBIG00000044782	MARS	99	63.326	Rhinopithecus_bieti
ENSDARG00000034396	mars	97	63.746	ENSRROG00000042331	MARS	100	63.746	Rhinopithecus_roxellana
ENSDARG00000034396	mars	61	50.515	YGR264C	MES1	76	50.515	Saccharomyces_cerevisiae
ENSDARG00000034396	mars	97	60.917	ENSSBOG00000022875	MARS	100	60.917	Saimiri_boliviensis_boliviensis
ENSDARG00000034396	mars	97	64.122	ENSSHAG00000007182	MARS	99	64.231	Sarcophilus_harrisii
ENSDARG00000034396	mars	97	72.350	ENSSFOG00015011038	mars	99	72.350	Scleropages_formosus
ENSDARG00000034396	mars	97	72.935	ENSSMAG00000012409	mars	100	73.102	Scophthalmus_maximus
ENSDARG00000034396	mars	97	72.935	ENSSDUG00000019070	mars	100	73.319	Seriola_dumerili
ENSDARG00000034396	mars	87	74.699	ENSSLDG00000005561	mars	96	74.699	Seriola_lalandi_dorsalis
ENSDARG00000034396	mars	89	68.465	ENSSARG00000002477	MARS	92	69.502	Sorex_araneus
ENSDARG00000034396	mars	79	65.587	ENSSPUG00000007756	MARS	99	65.359	Sphenodon_punctatus
ENSDARG00000034396	mars	97	73.776	ENSSPAG00000022691	mars	100	73.776	Stegastes_partitus
ENSDARG00000034396	mars	97	63.141	ENSSSCG00000023318	MARS	95	63.141	Sus_scrofa
ENSDARG00000034396	mars	97	70.460	ENSTRUG00000014774	mars	100	70.460	Takifugu_rubripes
ENSDARG00000034396	mars	97	68.501	ENSTNIG00000007060	mars	100	68.541	Tetraodon_nigroviridis
ENSDARG00000034396	mars	73	63.621	ENSTBEG00000000303	MARS	88	63.621	Tupaia_belangeri
ENSDARG00000034396	mars	74	69.885	ENSTTRG00000013088	MARS	75	69.885	Tursiops_truncatus
ENSDARG00000034396	mars	97	64.262	ENSUMAG00000019826	MARS	100	64.699	Ursus_maritimus
ENSDARG00000034396	mars	62	75.658	ENSVPAG00000008665	MARS	66	75.658	Vicugna_pacos
ENSDARG00000034396	mars	97	63.388	ENSVVUG00000017940	MARS	100	63.388	Vulpes_vulpes
ENSDARG00000034396	mars	66	72.713	ENSXETG00000025174	mars	99	72.713	Xenopus_tropicalis
ENSDARG00000034396	mars	97	72.070	ENSXCOG00000013878	mars	100	72.319	Xiphophorus_couchianus
ENSDARG00000034396	mars	97	72.678	ENSXMAG00000017920	mars	100	73.035	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004825	methionine-tRNA ligase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006418	tRNA aminoacylation for protein translation	-	IEA	Process
GO:0006431	methionyl-tRNA aminoacylation	-	IEA	Process
GO:0016874	ligase activity	-	IEA	Function