EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000035264 (Gene tree)
Gene ID: 407084
Gene Symbol: riok2
Alias: wu:fe48f07|zgc:55376|zgc:77493
Full Name: RIO kinase 2 (yeast)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5366 bases
Position: chr5:41639693-41645058
Accession: ZDB-GENE-040426-2913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000051091	RIO1	PF01163.22	1.5e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000137974	-	727	-	-	- (aa)	-	-
ENSDART00000141497	-	769	-	-	- (aa)	-	-
ENSDART00000051092	-	1734	-	ENSDARP00000051091	512 (aa)	-	A5WUT7

Gene Model

Click here to download ENSDARG00000035264's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000035264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000035264	riok2	100	65.371	ENSG00000058729	RIOK2	99	65.371	Homo_sapiens
ENSDARG00000035264	riok2	100	74.713	ENSAPOG00000011797	riok2	100	76.291	Acanthochromis_polyacanthus
ENSDARG00000035264	riok2	100	66.018	ENSAMEG00000014615	RIOK2	99	66.018	Ailuropoda_melanoleuca
ENSDARG00000035264	riok2	79	69.811	ENSACIG00000020646	riok2	89	71.122	Amphilophus_citrinellus
ENSDARG00000035264	riok2	100	74.759	ENSAOCG00000021840	riok2	100	75.624	Amphiprion_ocellaris
ENSDARG00000035264	riok2	100	74.566	ENSAPEG00000020853	riok2	100	75.432	Amphiprion_percula
ENSDARG00000035264	riok2	100	75.619	ENSATEG00000005671	riok2	100	75.619	Anabas_testudineus
ENSDARG00000035264	riok2	100	69.526	ENSACAG00000011858	RIOK2	100	69.526	Anolis_carolinensis
ENSDARG00000035264	riok2	100	66.846	ENSANAG00000015977	RIOK2	99	66.846	Aotus_nancymaae
ENSDARG00000035264	riok2	100	72.626	ENSACLG00000002755	riok2	100	74.624	Astatotilapia_calliptera
ENSDARG00000035264	riok2	100	80.688	ENSAMXG00000002368	riok2	100	80.688	Astyanax_mexicanus
ENSDARG00000035264	riok2	100	66.846	ENSBTAG00000011763	RIOK2	99	66.846	Bos_taurus
ENSDARG00000035264	riok2	63	57.500	WBGene00013688	riok-2	60	57.500	Caenorhabditis_elegans
ENSDARG00000035264	riok2	100	66.126	ENSCJAG00000040045	RIOK2	99	66.126	Callithrix_jacchus
ENSDARG00000035264	riok2	100	66.423	ENSCAFG00000007745	RIOK2	99	66.423	Canis_familiaris
ENSDARG00000035264	riok2	67	69.828	ENSCAFG00020015532	-	96	69.828	Canis_lupus_dingo
ENSDARG00000035264	riok2	100	65.328	ENSCAFG00020011453	-	99	65.328	Canis_lupus_dingo
ENSDARG00000035264	riok2	100	67.145	ENSCHIG00000016709	RIOK2	99	67.145	Capra_hircus
ENSDARG00000035264	riok2	100	65.079	ENSTSYG00000001916	RIOK2	99	65.079	Carlito_syrichta
ENSDARG00000035264	riok2	96	62.672	ENSCAPG00000006762	RIOK2	100	62.672	Cavia_aperea
ENSDARG00000035264	riok2	100	65.116	ENSCPOG00000010551	RIOK2	100	65.116	Cavia_porcellus
ENSDARG00000035264	riok2	100	66.367	ENSCCAG00000025712	RIOK2	99	66.367	Cebus_capucinus
ENSDARG00000035264	riok2	100	65.548	ENSCATG00000035047	RIOK2	99	65.548	Cercocebus_atys
ENSDARG00000035264	riok2	100	64.716	ENSCLAG00000006790	RIOK2	99	65.603	Chinchilla_lanigera
ENSDARG00000035264	riok2	65	59.008	ENSCSAG00000014233	RIOK2	98	59.008	Chlorocebus_sabaeus
ENSDARG00000035264	riok2	80	75.385	ENSCHOG00000003803	RIOK2	82	75.385	Choloepus_hoffmanni
ENSDARG00000035264	riok2	100	66.845	ENSCPBG00000015732	RIOK2	100	66.845	Chrysemys_picta_bellii
ENSDARG00000035264	riok2	99	53.920	ENSCING00000002364	-	99	54.951	Ciona_intestinalis
ENSDARG00000035264	riok2	99	51.894	ENSCSAVG00000006970	-	100	51.894	Ciona_savignyi
ENSDARG00000035264	riok2	100	55.634	ENSCANG00000042169	RIOK2	99	55.634	Colobus_angolensis_palliatus
ENSDARG00000035264	riok2	100	65.412	ENSCGRG00001000871	Riok2	99	65.412	Cricetulus_griseus_chok1gshd
ENSDARG00000035264	riok2	100	65.412	ENSCGRG00000008541	Riok2	99	65.412	Cricetulus_griseus_crigri
ENSDARG00000035264	riok2	100	72.948	ENSCSEG00000014204	riok2	100	75.522	Cynoglossus_semilaevis
ENSDARG00000035264	riok2	100	74.667	ENSCVAG00000012034	riok2	100	75.856	Cyprinodon_variegatus
ENSDARG00000035264	riok2	100	64.071	ENSDNOG00000037305	RIOK2	99	65.591	Dasypus_novemcinctus
ENSDARG00000035264	riok2	100	67.412	ENSDORG00000016345	Riok2	99	67.412	Dipodomys_ordii
ENSDARG00000035264	riok2	61	62.102	FBgn0039306	RIOK2	99	44.771	Drosophila_melanogaster
ENSDARG00000035264	riok2	59	87.619	ENSETEG00000013220	-	80	87.619	Echinops_telfairi
ENSDARG00000035264	riok2	85	54.430	ENSEBUG00000006099	riok2	82	54.641	Eptatretus_burgeri
ENSDARG00000035264	riok2	100	64.311	ENSEASG00005018799	RIOK2	99	64.311	Equus_asinus_asinus
ENSDARG00000035264	riok2	100	63.540	ENSECAG00000018441	RIOK2	99	63.540	Equus_caballus
ENSDARG00000035264	riok2	88	57.143	ENSEEUG00000013535	RIOK2	88	57.143	Erinaceus_europaeus
ENSDARG00000035264	riok2	77	85.763	ENSELUG00000011239	riok2	100	77.679	Esox_lucius
ENSDARG00000035264	riok2	100	65.154	ENSFCAG00000024077	RIOK2	99	65.154	Felis_catus
ENSDARG00000035264	riok2	95	61.798	ENSFALG00000010277	RIOK2	100	62.830	Ficedula_albicollis
ENSDARG00000035264	riok2	100	65.771	ENSFDAG00000015288	RIOK2	99	65.771	Fukomys_damarensis
ENSDARG00000035264	riok2	100	74.275	ENSFHEG00000010950	riok2	100	74.472	Fundulus_heteroclitus
ENSDARG00000035264	riok2	100	71.456	ENSGMOG00000011354	riok2	100	72.222	Gadus_morhua
ENSDARG00000035264	riok2	100	64.171	ENSGALG00000015288	RIOK2	100	64.171	Gallus_gallus
ENSDARG00000035264	riok2	100	75.435	ENSGAFG00000012056	riok2	100	75.483	Gambusia_affinis
ENSDARG00000035264	riok2	100	72.797	ENSGACG00000009754	riok2	100	72.328	Gasterosteus_aculeatus
ENSDARG00000035264	riok2	100	67.201	ENSGAGG00000013791	RIOK2	100	67.201	Gopherus_agassizii
ENSDARG00000035264	riok2	100	65.018	ENSGGOG00000022136	RIOK2	99	65.018	Gorilla_gorilla
ENSDARG00000035264	riok2	100	72.305	ENSHBUG00000010705	riok2	100	74.115	Haplochromis_burtoni
ENSDARG00000035264	riok2	100	66.058	ENSHGLG00000009139	-	99	66.058	Heterocephalus_glaber_female
ENSDARG00000035264	riok2	100	66.058	ENSHGLG00100014700	RIOK2	99	66.058	Heterocephalus_glaber_male
ENSDARG00000035264	riok2	100	73.269	ENSHCOG00000015555	riok2	100	73.269	Hippocampus_comes
ENSDARG00000035264	riok2	100	79.198	ENSIPUG00000007450	riok2	100	79.198	Ictalurus_punctatus
ENSDARG00000035264	riok2	100	64.007	ENSSTOG00000006659	RIOK2	99	64.007	Ictidomys_tridecemlineatus
ENSDARG00000035264	riok2	100	65.771	ENSJJAG00000016582	Riok2	99	65.771	Jaculus_jaculus
ENSDARG00000035264	riok2	100	74.612	ENSKMAG00000013229	riok2	100	75.242	Kryptolebias_marmoratus
ENSDARG00000035264	riok2	100	71.536	ENSLBEG00000015421	riok2	100	72.097	Labrus_bergylta
ENSDARG00000035264	riok2	100	65.448	ENSLACG00000000274	RIOK2	100	64.516	Latimeria_chalumnae
ENSDARG00000035264	riok2	100	74.903	ENSLOCG00000006432	riok2	100	74.903	Lepisosteus_oculatus
ENSDARG00000035264	riok2	100	64.884	ENSLAFG00000000919	RIOK2	99	64.884	Loxodonta_africana
ENSDARG00000035264	riok2	100	65.018	ENSMFAG00000033056	RIOK2	99	65.018	Macaca_fascicularis
ENSDARG00000035264	riok2	100	65.194	ENSMMUG00000000307	RIOK2	99	65.194	Macaca_mulatta
ENSDARG00000035264	riok2	100	65.194	ENSMNEG00000029708	RIOK2	99	65.194	Macaca_nemestrina
ENSDARG00000035264	riok2	88	62.624	ENSMLEG00000040038	RIOK2	99	62.624	Mandrillus_leucophaeus
ENSDARG00000035264	riok2	100	73.552	ENSMAMG00000013310	riok2	100	74.280	Mastacembelus_armatus
ENSDARG00000035264	riok2	100	71.507	ENSMZEG00005017067	riok2	100	73.840	Maylandia_zebra
ENSDARG00000035264	riok2	97	62.094	ENSMGAG00000006986	RIOK2	99	62.094	Meleagris_gallopavo
ENSDARG00000035264	riok2	76	88.889	ENSMAUG00000019527	Riok2	99	88.889	Mesocricetus_auratus
ENSDARG00000035264	riok2	100	67.143	ENSMICG00000037437	RIOK2	99	67.143	Microcebus_murinus
ENSDARG00000035264	riok2	100	66.360	ENSMOCG00000004230	Riok2	99	66.360	Microtus_ochrogaster
ENSDARG00000035264	riok2	100	73.231	ENSMMOG00000018155	riok2	100	74.761	Mola_mola
ENSDARG00000035264	riok2	100	66.901	ENSMODG00000015548	RIOK2	100	66.901	Monodelphis_domestica
ENSDARG00000035264	riok2	100	72.128	ENSMALG00000011266	riok2	100	72.901	Monopterus_albus
ENSDARG00000035264	riok2	100	65.201	ENSMUSG00000116564	Riok2	100	83.721	Mus_musculus
ENSDARG00000035264	riok2	100	66.909	ENSMPUG00000004450	RIOK2	99	66.909	Mustela_putorius_furo
ENSDARG00000035264	riok2	100	66.667	ENSMLUG00000016113	RIOK2	99	66.667	Myotis_lucifugus
ENSDARG00000035264	riok2	100	67.455	ENSNGAG00000017971	Riok2	99	67.455	Nannospalax_galili
ENSDARG00000035264	riok2	100	67.201	ENSNLEG00000014474	RIOK2	99	67.201	Nomascus_leucogenys
ENSDARG00000035264	riok2	96	51.916	ENSMEUG00000010529	RIOK2	100	51.916	Notamacropus_eugenii
ENSDARG00000035264	riok2	100	72.948	ENSONIG00000013689	riok2	100	75.094	Oreochromis_niloticus
ENSDARG00000035264	riok2	96	67.917	ENSOANG00000001225	RIOK2	99	68.480	Ornithorhynchus_anatinus
ENSDARG00000035264	riok2	100	66.431	ENSOCUG00000001656	RIOK2	99	66.431	Oryctolagus_cuniculus
ENSDARG00000035264	riok2	100	74.468	ENSORLG00020011553	riok2	100	73.684	Oryzias_latipes_hni
ENSDARG00000035264	riok2	100	73.786	ENSORLG00015001085	riok2	100	73.485	Oryzias_latipes_hsok
ENSDARG00000035264	riok2	100	75.000	ENSOMEG00000004617	riok2	100	75.194	Oryzias_melastigma
ENSDARG00000035264	riok2	100	64.286	ENSOGAG00000008467	RIOK2	99	64.286	Otolemur_garnettii
ENSDARG00000035264	riok2	100	66.846	ENSOARG00000018138	RIOK2	99	66.846	Ovis_aries
ENSDARG00000035264	riok2	100	61.160	ENSPPAG00000027414	RIOK2	99	64.066	Pan_paniscus
ENSDARG00000035264	riok2	100	65.154	ENSPPRG00000000169	RIOK2	99	65.154	Panthera_pardus
ENSDARG00000035264	riok2	100	65.517	ENSPTIG00000008344	RIOK2	99	65.517	Panthera_tigris_altaica
ENSDARG00000035264	riok2	100	65.018	ENSPTRG00000017100	RIOK2	99	65.018	Pan_troglodytes
ENSDARG00000035264	riok2	100	65.371	ENSPANG00000011977	RIOK2	99	65.371	Papio_anubis
ENSDARG00000035264	riok2	100	74.115	ENSPKIG00000016220	riok2	100	74.444	Paramormyrops_kingsleyae
ENSDARG00000035264	riok2	100	66.365	ENSPSIG00000013238	RIOK2	100	66.365	Pelodiscus_sinensis
ENSDARG00000035264	riok2	100	73.786	ENSPMGG00000021822	riok2	100	74.855	Periophthalmus_magnuspinnatus
ENSDARG00000035264	riok2	100	65.771	ENSPEMG00000018872	Riok2	99	65.771	Peromyscus_maniculatus_bairdii
ENSDARG00000035264	riok2	100	74.517	ENSPFOG00000017064	riok2	100	75.097	Poecilia_formosa
ENSDARG00000035264	riok2	100	73.946	ENSPLAG00000003043	riok2	100	74.330	Poecilia_latipinna
ENSDARG00000035264	riok2	100	74.664	ENSPMEG00000007622	riok2	100	75.624	Poecilia_mexicana
ENSDARG00000035264	riok2	100	74.904	ENSPREG00000002255	riok2	100	75.000	Poecilia_reticulata
ENSDARG00000035264	riok2	100	65.194	ENSPPYG00000015654	RIOK2	99	65.194	Pongo_abelii
ENSDARG00000035264	riok2	100	63.993	ENSPCAG00000006508	RIOK2	99	63.993	Procavia_capensis
ENSDARG00000035264	riok2	100	64.311	ENSPCOG00000024315	RIOK2	99	64.311	Propithecus_coquereli
ENSDARG00000035264	riok2	88	74.615	ENSPVAG00000016658	RIOK2	84	74.615	Pteropus_vampyrus
ENSDARG00000035264	riok2	100	72.761	ENSPNYG00000018868	riok2	100	74.579	Pundamilia_nyererei
ENSDARG00000035264	riok2	100	81.044	ENSPNAG00000010841	riok2	100	81.044	Pygocentrus_nattereri
ENSDARG00000035264	riok2	100	66.306	ENSRNOG00000012692	Riok2	99	66.306	Rattus_norvegicus
ENSDARG00000035264	riok2	99	64.779	ENSRBIG00000030658	RIOK2	99	64.779	Rhinopithecus_bieti
ENSDARG00000035264	riok2	99	64.602	ENSRROG00000039203	RIOK2	99	64.602	Rhinopithecus_roxellana
ENSDARG00000035264	riok2	61	46.903	YNL207W	-	80	46.903	Saccharomyces_cerevisiae
ENSDARG00000035264	riok2	100	66.726	ENSSBOG00000032152	RIOK2	99	66.726	Saimiri_boliviensis_boliviensis
ENSDARG00000035264	riok2	100	65.385	ENSSHAG00000006935	-	100	65.901	Sarcophilus_harrisii
ENSDARG00000035264	riok2	100	74.019	ENSSFOG00015005966	riok2	100	74.766	Scleropages_formosus
ENSDARG00000035264	riok2	100	73.805	ENSSMAG00000010529	riok2	100	74.379	Scophthalmus_maximus
ENSDARG00000035264	riok2	100	74.566	ENSSDUG00000014891	riok2	100	74.759	Seriola_dumerili
ENSDARG00000035264	riok2	100	74.374	ENSSLDG00000001926	riok2	100	73.724	Seriola_lalandi_dorsalis
ENSDARG00000035264	riok2	100	60.741	ENSSARG00000001798	RIOK2	99	60.741	Sorex_araneus
ENSDARG00000035264	riok2	71	72.396	ENSSPUG00000003509	RIOK2	92	72.396	Sphenodon_punctatus
ENSDARG00000035264	riok2	100	70.182	ENSSPAG00000016554	riok2	100	75.000	Stegastes_partitus
ENSDARG00000035264	riok2	100	62.007	ENSTGUG00000001223	RIOK2	100	62.410	Taeniopygia_guttata
ENSDARG00000035264	riok2	100	72.762	ENSTRUG00000011455	riok2	100	73.714	Takifugu_rubripes
ENSDARG00000035264	riok2	79	70.343	ENSTNIG00000015401	riok2	100	71.394	Tetraodon_nigroviridis
ENSDARG00000035264	riok2	100	64.158	ENSTTRG00000010640	RIOK2	99	64.158	Tursiops_truncatus
ENSDARG00000035264	riok2	95	65.543	ENSUAMG00000008585	RIOK2	99	65.543	Ursus_americanus
ENSDARG00000035264	riok2	100	66.308	ENSUMAG00000006726	RIOK2	99	66.308	Ursus_maritimus
ENSDARG00000035264	riok2	88	89.286	ENSVPAG00000001542	RIOK2	88	89.286	Vicugna_pacos
ENSDARG00000035264	riok2	100	65.636	ENSVVUG00000020170	RIOK2	99	65.636	Vulpes_vulpes
ENSDARG00000035264	riok2	100	68.058	ENSXETG00000013194	riok2	100	68.240	Xenopus_tropicalis
ENSDARG00000035264	riok2	100	75.676	ENSXCOG00000016879	riok2	100	75.869	Xiphophorus_couchianus
ENSDARG00000035264	riok2	100	76.062	ENSXMAG00000007425	riok2	100	75.624	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004672	protein kinase activity	21873635.	IBA	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030490	maturation of SSU-rRNA	21873635.	IBA	Process
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component