EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000035699 (Gene tree)
Gene ID: 406652
Gene Symbol: srp19
Alias: zgc:63961
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6979 bases
Position: chr8:537809-544787
Accession: ZDB-GENE-040426-2657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000051775	SRP19	PF01922.17	1.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000051776	-	2008	-	ENSDARP00000051775	141 (aa)	-	Q7T3C9

Gene Model

Click here to download ENSDARG00000035699's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000035699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000035699	srp19	90	71.875	ENSG00000153037	SRP19	93	72.340	Homo_sapiens
ENSDARG00000035699	srp19	94	80.451	ENSAPOG00000002199	srp19	92	80.153	Acanthochromis_polyacanthus
ENSDARG00000035699	srp19	89	71.654	ENSAMEG00000012623	SRP19	86	71.429	Ailuropoda_melanoleuca
ENSDARG00000035699	srp19	94	77.444	ENSACIG00000005082	srp19	92	77.099	Amphilophus_citrinellus
ENSDARG00000035699	srp19	94	81.203	ENSAOCG00000002718	srp19	93	80.916	Amphiprion_ocellaris
ENSDARG00000035699	srp19	94	80.451	ENSAPEG00000022170	srp19	93	80.153	Amphiprion_percula
ENSDARG00000035699	srp19	94	83.459	ENSATEG00000012472	srp19	93	83.206	Anabas_testudineus
ENSDARG00000035699	srp19	79	67.257	ENSAPLG00000002624	SRP19	91	67.257	Anas_platyrhynchos
ENSDARG00000035699	srp19	93	66.917	ENSACAG00000007550	SRP19	91	66.917	Anolis_carolinensis
ENSDARG00000035699	srp19	93	53.030	ENSANAG00000030287	-	89	53.659	Aotus_nancymaae
ENSDARG00000035699	srp19	89	71.654	ENSANAG00000032576	-	88	71.429	Aotus_nancymaae
ENSDARG00000035699	srp19	84	59.167	ENSANAG00000029862	-	87	64.211	Aotus_nancymaae
ENSDARG00000035699	srp19	94	74.436	ENSACLG00000006259	srp19	93	74.046	Astatotilapia_calliptera
ENSDARG00000035699	srp19	93	80.153	ENSAMXG00000043011	srp19	93	80.153	Astyanax_mexicanus
ENSDARG00000035699	srp19	89	70.079	ENSBTAG00000012803	SRP19	88	69.841	Bos_taurus
ENSDARG00000035699	srp19	82	47.458	WBGene00018159	F37F2.2	82	47.458	Caenorhabditis_elegans
ENSDARG00000035699	srp19	86	52.459	ENSCJAG00000045531	-	78	52.419	Callithrix_jacchus
ENSDARG00000035699	srp19	89	72.441	ENSCJAG00000038676	-	85	73.118	Callithrix_jacchus
ENSDARG00000035699	srp19	89	70.866	ENSCAFG00000031549	SRP19	88	70.635	Canis_familiaris
ENSDARG00000035699	srp19	84	70.833	ENSCAFG00020022437	-	92	71.311	Canis_lupus_dingo
ENSDARG00000035699	srp19	89	70.866	ENSCAFG00020014267	-	88	70.635	Canis_lupus_dingo
ENSDARG00000035699	srp19	65	68.478	ENSCAFG00020004285	-	84	69.149	Canis_lupus_dingo
ENSDARG00000035699	srp19	89	70.079	ENSCHIG00000017551	SRP19	88	69.841	Capra_hircus
ENSDARG00000035699	srp19	89	71.654	ENSTSYG00000007875	SRP19	88	71.429	Carlito_syrichta
ENSDARG00000035699	srp19	73	66.346	ENSCPOG00000036806	SRP19	78	66.346	Cavia_porcellus
ENSDARG00000035699	srp19	89	71.654	ENSCCAG00000035651	-	88	71.429	Cebus_capucinus
ENSDARG00000035699	srp19	87	54.032	ENSCCAG00000023426	-	80	54.032	Cebus_capucinus
ENSDARG00000035699	srp19	87	53.659	ENSCCAG00000029821	-	61	53.659	Cebus_capucinus
ENSDARG00000035699	srp19	88	60.000	ENSCATG00000040513	-	78	60.630	Cercocebus_atys
ENSDARG00000035699	srp19	89	66.929	ENSCATG00000039250	-	87	66.667	Cercocebus_atys
ENSDARG00000035699	srp19	89	70.635	ENSCLAG00000004791	-	87	70.400	Chinchilla_lanigera
ENSDARG00000035699	srp19	89	65.873	ENSCLAG00000016055	-	86	65.600	Chinchilla_lanigera
ENSDARG00000035699	srp19	89	70.079	ENSCHOG00000013452	SRP19	88	69.841	Choloepus_hoffmanni
ENSDARG00000035699	srp19	93	68.182	ENSCPBG00000013903	SRP19	92	68.182	Chrysemys_picta_bellii
ENSDARG00000035699	srp19	90	70.312	ENSCGRG00001020510	Srp19	88	70.635	Cricetulus_griseus_chok1gshd
ENSDARG00000035699	srp19	84	64.706	ENSCGRG00000008542	-	91	64.407	Cricetulus_griseus_crigri
ENSDARG00000035699	srp19	67	67.000	ENSCGRG00000010716	-	87	65.657	Cricetulus_griseus_crigri
ENSDARG00000035699	srp19	94	76.692	ENSCSEG00000010039	srp19	93	76.336	Cynoglossus_semilaevis
ENSDARG00000035699	srp19	94	79.699	ENSCVAG00000017621	srp19	93	79.389	Cyprinodon_variegatus
ENSDARG00000035699	srp19	89	70.079	ENSDNOG00000013856	SRP19	88	69.841	Dasypus_novemcinctus
ENSDARG00000035699	srp19	69	70.408	ENSDORG00000004746	Srp19	76	70.103	Dipodomys_ordii
ENSDARG00000035699	srp19	88	45.968	FBgn0015298	Srp19	70	50.000	Drosophila_melanogaster
ENSDARG00000035699	srp19	90	71.094	ENSETEG00000017132	SRP19	88	71.429	Echinops_telfairi
ENSDARG00000035699	srp19	90	68.504	ENSEBUG00000006613	srp19	93	67.939	Eptatretus_burgeri
ENSDARG00000035699	srp19	89	71.654	ENSEASG00005015182	SRP19	88	71.429	Equus_asinus_asinus
ENSDARG00000035699	srp19	89	70.866	ENSEEUG00000007298	SRP19	88	70.635	Erinaceus_europaeus
ENSDARG00000035699	srp19	93	80.153	ENSELUG00000007958	srp19	93	80.153	Esox_lucius
ENSDARG00000035699	srp19	94	74.436	ENSELUG00000004594	srp19	93	74.046	Esox_lucius
ENSDARG00000035699	srp19	89	71.654	ENSFCAG00000025895	SRP19	88	71.429	Felis_catus
ENSDARG00000035699	srp19	89	70.079	ENSFDAG00000013543	SRP19	88	69.841	Fukomys_damarensis
ENSDARG00000035699	srp19	94	78.947	ENSFHEG00000000493	srp19	93	78.626	Fundulus_heteroclitus
ENSDARG00000035699	srp19	85	78.333	ENSGMOG00000003264	srp19	92	77.966	Gadus_morhua
ENSDARG00000035699	srp19	89	69.048	ENSGALG00000000218	SRP19	91	67.176	Gallus_gallus
ENSDARG00000035699	srp19	89	80.000	ENSGAFG00000015815	srp19	59	79.675	Gambusia_affinis
ENSDARG00000035699	srp19	94	81.955	ENSGACG00000001093	srp19	89	81.679	Gasterosteus_aculeatus
ENSDARG00000035699	srp19	93	67.424	ENSGAGG00000025305	SRP19	92	67.424	Gopherus_agassizii
ENSDARG00000035699	srp19	90	71.094	ENSHBUG00000006131	srp19	88	70.635	Haplochromis_burtoni
ENSDARG00000035699	srp19	89	70.079	ENSHGLG00000006075	SRP19	88	69.841	Heterocephalus_glaber_female
ENSDARG00000035699	srp19	89	70.079	ENSHGLG00100015859	SRP19	88	69.841	Heterocephalus_glaber_male
ENSDARG00000035699	srp19	94	75.188	ENSHCOG00000013231	srp19	93	75.000	Hippocampus_comes
ENSDARG00000035699	srp19	93	80.916	ENSIPUG00000025084	srp19	93	80.916	Ictalurus_punctatus
ENSDARG00000035699	srp19	89	71.654	ENSSTOG00000000348	SRP19	89	70.312	Ictidomys_tridecemlineatus
ENSDARG00000035699	srp19	89	70.866	ENSJJAG00000017185	Srp19	88	70.635	Jaculus_jaculus
ENSDARG00000035699	srp19	94	81.203	ENSKMAG00000011155	srp19	93	80.916	Kryptolebias_marmoratus
ENSDARG00000035699	srp19	94	79.699	ENSLBEG00000026727	srp19	93	79.389	Labrus_bergylta
ENSDARG00000035699	srp19	93	71.970	ENSLACG00000004459	SRP19	86	71.970	Latimeria_chalumnae
ENSDARG00000035699	srp19	93	75.573	ENSLOCG00000010302	srp19	93	75.573	Lepisosteus_oculatus
ENSDARG00000035699	srp19	89	69.291	ENSLAFG00000002564	SRP19	88	69.048	Loxodonta_africana
ENSDARG00000035699	srp19	84	54.622	ENSMFAG00000040055	-	90	55.372	Macaca_fascicularis
ENSDARG00000035699	srp19	84	66.387	ENSMFAG00000000554	-	91	63.281	Macaca_fascicularis
ENSDARG00000035699	srp19	84	67.227	ENSMMUG00000049186	-	91	64.062	Macaca_mulatta
ENSDARG00000035699	srp19	87	60.163	ENSMMUG00000032515	-	92	60.800	Macaca_mulatta
ENSDARG00000035699	srp19	84	53.782	ENSMNEG00000040117	-	90	54.545	Macaca_nemestrina
ENSDARG00000035699	srp19	90	71.875	ENSMNEG00000038714	SRP19	88	72.222	Macaca_nemestrina
ENSDARG00000035699	srp19	94	81.955	ENSMAMG00000018346	srp19	92	81.679	Mastacembelus_armatus
ENSDARG00000035699	srp19	94	74.436	ENSMZEG00005001765	srp19	93	74.046	Maylandia_zebra
ENSDARG00000035699	srp19	84	68.333	ENSMGAG00000006762	SRP19	92	68.333	Meleagris_gallopavo
ENSDARG00000035699	srp19	90	68.750	ENSMICG00000000399	SRP19	88	69.048	Microcebus_murinus
ENSDARG00000035699	srp19	65	64.516	ENSMICG00000049202	-	86	65.263	Microcebus_murinus
ENSDARG00000035699	srp19	67	71.875	ENSMOCG00000010532	-	87	71.579	Microtus_ochrogaster
ENSDARG00000035699	srp19	90	71.875	ENSMOCG00000006534	Srp19	88	72.222	Microtus_ochrogaster
ENSDARG00000035699	srp19	89	79.200	ENSMMOG00000010417	srp19	80	78.862	Mola_mola
ENSDARG00000035699	srp19	93	71.970	ENSMODG00000013278	SRP19	92	71.970	Monodelphis_domestica
ENSDARG00000035699	srp19	94	81.955	ENSMALG00000003858	srp19	93	81.679	Monopterus_albus
ENSDARG00000035699	srp19	90	73.438	MGP_CAROLIEiJ_G0022086	Srp19	88	73.810	Mus_caroli
ENSDARG00000035699	srp19	90	73.438	ENSMUSG00000014504	Srp19	88	73.810	Mus_musculus
ENSDARG00000035699	srp19	90	72.656	MGP_PahariEiJ_G0018820	Srp19	88	73.016	Mus_pahari
ENSDARG00000035699	srp19	90	73.438	MGP_SPRETEiJ_G0022998	Srp19	88	73.810	Mus_spretus
ENSDARG00000035699	srp19	89	72.441	ENSMPUG00000012695	SRP19	86	72.222	Mustela_putorius_furo
ENSDARG00000035699	srp19	90	69.531	ENSMLUG00000014793	-	88	69.841	Myotis_lucifugus
ENSDARG00000035699	srp19	87	66.129	ENSMLUG00000024549	-	89	66.129	Myotis_lucifugus
ENSDARG00000035699	srp19	87	63.415	ENSNGAG00000014524	-	95	63.415	Nannospalax_galili
ENSDARG00000035699	srp19	90	68.750	ENSNGAG00000003440	-	88	69.048	Nannospalax_galili
ENSDARG00000035699	srp19	89	63.492	ENSNLEG00000035364	-	87	66.316	Nomascus_leucogenys
ENSDARG00000035699	srp19	84	72.269	ENSMEUG00000012529	SRP19	92	72.269	Notamacropus_eugenii
ENSDARG00000035699	srp19	82	70.940	ENSOPRG00000010549	SRP19	92	70.588	Ochotona_princeps
ENSDARG00000035699	srp19	67	70.833	ENSODEG00000005538	-	83	70.526	Octodon_degus
ENSDARG00000035699	srp19	87	57.724	ENSODEG00000013862	-	86	58.400	Octodon_degus
ENSDARG00000035699	srp19	87	66.935	ENSODEG00000019119	-	88	66.667	Octodon_degus
ENSDARG00000035699	srp19	94	75.188	ENSONIG00000000542	srp19	93	74.809	Oreochromis_niloticus
ENSDARG00000035699	srp19	93	67.424	ENSOANG00000011139	SRP19	76	67.424	Ornithorhynchus_anatinus
ENSDARG00000035699	srp19	89	70.312	ENSOCUG00000015639	SRP19	88	70.079	Oryctolagus_cuniculus
ENSDARG00000035699	srp19	94	78.947	ENSORLG00000028267	srp19	94	78.626	Oryzias_latipes
ENSDARG00000035699	srp19	94	78.947	ENSORLG00020015201	srp19	94	78.626	Oryzias_latipes_hni
ENSDARG00000035699	srp19	94	78.947	ENSORLG00015007525	srp19	94	78.626	Oryzias_latipes_hsok
ENSDARG00000035699	srp19	94	79.699	ENSOMEG00000009178	srp19	94	79.389	Oryzias_melastigma
ENSDARG00000035699	srp19	89	70.079	ENSOGAG00000008579	SRP19	88	69.841	Otolemur_garnettii
ENSDARG00000035699	srp19	90	68.750	ENSOARG00000016066	SRP19	88	69.048	Ovis_aries
ENSDARG00000035699	srp19	90	71.875	ENSPPAG00000037062	SRP19	88	72.222	Pan_paniscus
ENSDARG00000035699	srp19	89	71.654	ENSPPRG00000015591	SRP19	88	71.429	Panthera_pardus
ENSDARG00000035699	srp19	89	71.654	ENSPTIG00000021474	SRP19	88	71.429	Panthera_tigris_altaica
ENSDARG00000035699	srp19	90	71.875	ENSPTRG00000017136	SRP19	88	72.222	Pan_troglodytes
ENSDARG00000035699	srp19	90	71.875	ENSPANG00000004370	-	88	72.222	Papio_anubis
ENSDARG00000035699	srp19	90	64.844	ENSPANG00000034740	-	87	65.079	Papio_anubis
ENSDARG00000035699	srp19	94	74.436	ENSPKIG00000018671	srp19	93	74.046	Paramormyrops_kingsleyae
ENSDARG00000035699	srp19	84	66.667	ENSPSIG00000013811	SRP19	92	66.667	Pelodiscus_sinensis
ENSDARG00000035699	srp19	94	78.195	ENSPMGG00000015313	srp19	93	77.863	Periophthalmus_magnuspinnatus
ENSDARG00000035699	srp19	85	73.554	ENSPEMG00000004412	-	88	73.333	Peromyscus_maniculatus_bairdii
ENSDARG00000035699	srp19	95	65.672	ENSPMAG00000002685	srp19	93	67.176	Petromyzon_marinus
ENSDARG00000035699	srp19	93	71.212	ENSPCIG00000010250	SRP19	92	71.212	Phascolarctos_cinereus
ENSDARG00000035699	srp19	94	81.955	ENSPFOG00000015887	srp19	93	81.679	Poecilia_formosa
ENSDARG00000035699	srp19	94	81.955	ENSPLAG00000007784	srp19	93	81.679	Poecilia_latipinna
ENSDARG00000035699	srp19	94	82.707	ENSPMEG00000003056	srp19	93	82.443	Poecilia_mexicana
ENSDARG00000035699	srp19	94	81.955	ENSPREG00000017307	srp19	92	81.679	Poecilia_reticulata
ENSDARG00000035699	srp19	90	71.875	ENSPPYG00000029584	SRP19	86	72.222	Pongo_abelii
ENSDARG00000035699	srp19	67	67.368	ENSPCAG00000000228	SRP19	65	67.021	Procavia_capensis
ENSDARG00000035699	srp19	90	70.312	ENSPCOG00000023239	SRP19	88	70.635	Propithecus_coquereli
ENSDARG00000035699	srp19	89	70.079	ENSPVAG00000004895	SRP19	88	69.841	Pteropus_vampyrus
ENSDARG00000035699	srp19	93	83.333	ENSPNAG00000009392	srp19	93	83.333	Pygocentrus_nattereri
ENSDARG00000035699	srp19	90	72.656	ENSRNOG00000020204	Srp19	88	73.016	Rattus_norvegicus
ENSDARG00000035699	srp19	90	71.875	ENSRBIG00000015627	-	88	72.222	Rhinopithecus_bieti
ENSDARG00000035699	srp19	89	65.079	ENSRBIG00000040440	-	87	65.079	Rhinopithecus_bieti
ENSDARG00000035699	srp19	52	69.333	ENSRBIG00000031651	-	83	69.333	Rhinopithecus_bieti
ENSDARG00000035699	srp19	87	58.871	ENSRROG00000037316	-	90	59.504	Rhinopithecus_roxellana
ENSDARG00000035699	srp19	89	65.079	ENSRROG00000037054	-	88	65.079	Rhinopithecus_roxellana
ENSDARG00000035699	srp19	91	52.713	ENSSBOG00000032685	-	84	59.574	Saimiri_boliviensis_boliviensis
ENSDARG00000035699	srp19	89	71.654	ENSSBOG00000028071	-	88	71.429	Saimiri_boliviensis_boliviensis
ENSDARG00000035699	srp19	94	79.699	ENSSFOG00015022139	srp19	93	79.389	Scleropages_formosus
ENSDARG00000035699	srp19	94	81.203	ENSSMAG00000016803	srp19	92	80.916	Scophthalmus_maximus
ENSDARG00000035699	srp19	94	70.833	ENSSDUG00000012930	srp19	93	70.423	Seriola_dumerili
ENSDARG00000035699	srp19	70	57.143	ENSSLDG00000021916	-	74	62.366	Seriola_lalandi_dorsalis
ENSDARG00000035699	srp19	89	70.866	ENSSARG00000000615	SRP19	88	70.635	Sorex_araneus
ENSDARG00000035699	srp19	87	73.171	ENSSPUG00000015769	SRP19	90	70.992	Sphenodon_punctatus
ENSDARG00000035699	srp19	89	70.866	ENSSSCG00000026230	SRP19	88	70.635	Sus_scrofa
ENSDARG00000035699	srp19	87	69.106	ENSTGUG00000001019	SRP19	86	69.048	Taeniopygia_guttata
ENSDARG00000035699	srp19	94	79.562	ENSTRUG00000023119	srp19	93	79.259	Takifugu_rubripes
ENSDARG00000035699	srp19	94	82.707	ENSTNIG00000018880	srp19	93	82.443	Tetraodon_nigroviridis
ENSDARG00000035699	srp19	89	70.079	ENSTTRG00000001690	SRP19	87	69.841	Tursiops_truncatus
ENSDARG00000035699	srp19	87	71.774	ENSUAMG00000000111	SRP19	88	72.222	Ursus_americanus
ENSDARG00000035699	srp19	89	72.441	ENSUMAG00000016997	SRP19	88	72.222	Ursus_maritimus
ENSDARG00000035699	srp19	89	71.654	ENSVPAG00000006001	SRP19	88	71.429	Vicugna_pacos
ENSDARG00000035699	srp19	69	70.408	ENSVVUG00000012423	SRP19	86	73.134	Vulpes_vulpes
ENSDARG00000035699	srp19	86	69.672	ENSXETG00000011993	srp19	85	69.167	Xenopus_tropicalis
ENSDARG00000035699	srp19	87	71.545	ENSXCOG00000012530	srp19	86	71.545	Xiphophorus_couchianus
ENSDARG00000035699	srp19	94	82.707	ENSXMAG00000029788	srp19	93	82.443	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	21873635.	IBA	Component
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	IEA	Process
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0006617	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	21873635.	IBA	Process
GO:0008312	7S RNA binding	21873635.	IBA	Function
GO:0008312	7S RNA binding	-	IEA	Function
GO:0048500	signal recognition particle	-	IEA	Component