EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000035719 (Gene tree)
Gene ID: 393819
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7682 bases
Position: chr3:16134376-16142057
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000024581	MMR_HSR1	PF01926.23	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000016616	-	1457	-	ENSDARP00000024581	179 (aa)	-	Q6P6E8
ENSDART00000136560	-	826	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000035719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000035719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000035719	arl5c	99	39.665	ENSDARG00000071409	arl3	98	39.665
ENSDARG00000035719	arl5c	96	48.555	ENSDARG00000070472	arf5	96	48.555
ENSDARG00000035719	arl5c	89	40.964	ENSDARG00000033182	arl4ab	83	40.964
ENSDARG00000035719	arl5c	63	30.579	ENSDARG00000035188	rab14l	54	30.579
ENSDARG00000035719	arl5c	84	42.105	ENSDARG00000036637	arl11	86	42.105
ENSDARG00000035719	arl5c	99	38.587	ENSDARG00000032056	arl6	98	38.587
ENSDARG00000035719	arl5c	87	33.125	ENSDARG00000078686	arl8a	84	33.125
ENSDARG00000035719	arl5c	98	73.143	ENSDARG00000094709	arl8	98	73.143
ENSDARG00000035719	arl5c	98	50.282	ENSDARG00000056582	arf2b	98	50.282
ENSDARG00000035719	arl5c	98	68.750	ENSDARG00000018627	arl5a	98	68.750
ENSDARG00000035719	arl5c	96	47.977	ENSDARG00000101680	arl1	100	47.953
ENSDARG00000035719	arl5c	94	36.872	ENSDARG00000057857	arfrp1	89	36.872
ENSDARG00000035719	arl5c	63	30.579	ENSDARG00000074246	rab14	54	30.579
ENSDARG00000035719	arl5c	89	43.636	ENSDARG00000032708	arl4cb	86	43.636
ENSDARG00000035719	arl5c	56	30.556	ENSDARG00000037967	si:dkey-16l2.16	91	30.556
ENSDARG00000035719	arl5c	85	41.139	ENSDARG00000045074	arl4d	79	41.139
ENSDARG00000035719	arl5c	99	38.202	ENSDARG00000069496	arl2	97	38.202
ENSDARG00000035719	arl5c	96	48.555	ENSDARG00000113899	zgc:77650	96	48.555
ENSDARG00000035719	arl5c	98	50.568	ENSDARG00000009484	arf1	98	50.568
ENSDARG00000035719	arl5c	98	45.763	ENSDARG00000045989	arf4a	98	45.763
ENSDARG00000035719	arl5c	84	45.806	ENSDARG00000063223	arl14	77	45.806
ENSDARG00000035719	arl5c	84	32.026	ENSDARG00000012763	arl13b	64	30.539
ENSDARG00000035719	arl5c	98	49.153	ENSDARG00000070539	arf3a	98	49.153
ENSDARG00000035719	arl5c	83	30.667	ENSDARG00000006915	arl8ba	78	30.667
ENSDARG00000035719	arl5c	89	43.636	ENSDARG00000057606	arl4ca	86	43.636
ENSDARG00000035719	arl5c	97	36.932	ENSDARG00000111106	arl3l1	94	36.932
ENSDARG00000035719	arl5c	87	31.875	ENSDARG00000070318	arl8bb	84	31.875
ENSDARG00000035719	arl5c	98	49.718	ENSDARG00000036998	arf3b	98	49.718
ENSDARG00000035719	arl5c	98	50.847	ENSDARG00000014763	arf2a	100	51.695
ENSDARG00000035719	arl5c	99	39.106	ENSDARG00000056794	zgc:110197	98	39.106
ENSDARG00000035719	arl5c	85	38.562	ENSDARG00000015404	arl3l2	87	38.272
ENSDARG00000035719	arl5c	96	46.552	ENSDARG00000074210	ARF5	85	46.552
ENSDARG00000035719	arl5c	98	50.282	ENSDARG00000016393	arf2b	99	52.448
ENSDARG00000035719	arl5c	89	40.606	ENSDARG00000099918	arl4aa	83	40.606

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000035719	arl5c	100	79.888	ENSAPOG00000005821	arl5c	100	79.888	Acanthochromis_polyacanthus
ENSDARG00000035719	arl5c	99	82.682	ENSACIG00000008975	arl5c	99	82.682	Amphilophus_citrinellus
ENSDARG00000035719	arl5c	100	81.006	ENSAOCG00000010448	arl5c	100	81.006	Amphiprion_ocellaris
ENSDARG00000035719	arl5c	100	81.006	ENSAPEG00000002699	arl5c	100	81.006	Amphiprion_percula
ENSDARG00000035719	arl5c	100	78.771	ENSATEG00000000181	arl5c	100	78.771	Anabas_testudineus
ENSDARG00000035719	arl5c	100	84.358	ENSACLG00000000922	arl5c	100	84.358	Astatotilapia_calliptera
ENSDARG00000035719	arl5c	100	90.503	ENSAMXG00000031771	arl5c	100	90.503	Astyanax_mexicanus
ENSDARG00000035719	arl5c	100	76.536	ENSCSEG00000009845	arl5c	100	76.536	Cynoglossus_semilaevis
ENSDARG00000035719	arl5c	99	82.022	ENSCVAG00000012706	arl5c	99	82.022	Cyprinodon_variegatus
ENSDARG00000035719	arl5c	100	88.268	ENSELUG00000016864	arl5c	100	88.268	Esox_lucius
ENSDARG00000035719	arl5c	100	82.123	ENSFHEG00000013677	arl5c	100	82.123	Fundulus_heteroclitus
ENSDARG00000035719	arl5c	100	81.564	ENSGAFG00000002547	arl5c	100	81.564	Gambusia_affinis
ENSDARG00000035719	arl5c	100	83.240	ENSGACG00000009321	arl5c	100	83.240	Gasterosteus_aculeatus
ENSDARG00000035719	arl5c	100	84.358	ENSHBUG00000007301	arl5c	100	84.358	Haplochromis_burtoni
ENSDARG00000035719	arl5c	100	75.419	ENSHCOG00000017576	-	100	75.419	Hippocampus_comes
ENSDARG00000035719	arl5c	100	89.385	ENSIPUG00000023232	arl5c	100	89.385	Ictalurus_punctatus
ENSDARG00000035719	arl5c	100	83.240	ENSKMAG00000011323	arl5c	100	83.240	Kryptolebias_marmoratus
ENSDARG00000035719	arl5c	100	80.447	ENSLBEG00000006177	arl5c	86	80.447	Labrus_bergylta
ENSDARG00000035719	arl5c	100	81.006	ENSMAMG00000022157	arl5c	100	81.006	Mastacembelus_armatus
ENSDARG00000035719	arl5c	100	84.358	ENSMZEG00005022925	arl5c	100	84.358	Maylandia_zebra
ENSDARG00000035719	arl5c	92	85.976	ENSMMOG00000020851	arl5c	96	85.976	Mola_mola
ENSDARG00000035719	arl5c	99	77.528	ENSMALG00000009306	arl5c	99	77.528	Monopterus_albus
ENSDARG00000035719	arl5c	100	84.358	ENSNBRG00000020245	arl5c	100	84.358	Neolamprologus_brichardi
ENSDARG00000035719	arl5c	100	83.799	ENSONIG00000000890	arl5c	99	83.799	Oreochromis_niloticus
ENSDARG00000035719	arl5c	100	77.095	ENSORLG00000002960	arl5c	100	77.439	Oryzias_latipes
ENSDARG00000035719	arl5c	100	77.095	ENSORLG00020010074	arl5c	100	77.439	Oryzias_latipes_hni
ENSDARG00000035719	arl5c	100	77.095	ENSORLG00015002752	arl5c	100	77.439	Oryzias_latipes_hsok
ENSDARG00000035719	arl5c	97	79.191	ENSOMEG00000021718	arl5c	98	79.191	Oryzias_melastigma
ENSDARG00000035719	arl5c	100	86.592	ENSPKIG00000021727	arl5c	100	86.592	Paramormyrops_kingsleyae
ENSDARG00000035719	arl5c	100	82.682	ENSPFOG00000007842	arl5c	99	82.682	Poecilia_formosa
ENSDARG00000035719	arl5c	100	82.123	ENSPLAG00000002394	arl5c	100	82.123	Poecilia_latipinna
ENSDARG00000035719	arl5c	94	84.024	ENSPMEG00000000631	arl5c	98	84.024	Poecilia_mexicana
ENSDARG00000035719	arl5c	100	83.240	ENSPREG00000008730	arl5c	100	83.240	Poecilia_reticulata
ENSDARG00000035719	arl5c	100	84.358	ENSPNYG00000012720	arl5c	100	84.358	Pundamilia_nyererei
ENSDARG00000035719	arl5c	100	88.827	ENSPNAG00000002310	arl5c	100	88.827	Pygocentrus_nattereri
ENSDARG00000035719	arl5c	100	87.151	ENSSFOG00015023529	arl5c	100	87.151	Scleropages_formosus
ENSDARG00000035719	arl5c	100	82.682	ENSSMAG00000010552	arl5c	100	82.682	Scophthalmus_maximus
ENSDARG00000035719	arl5c	100	82.682	ENSSDUG00000022640	arl5c	100	82.682	Seriola_dumerili
ENSDARG00000035719	arl5c	100	82.682	ENSSLDG00000000728	arl5c	100	82.682	Seriola_lalandi_dorsalis
ENSDARG00000035719	arl5c	100	81.006	ENSSPAG00000007687	arl5c	100	81.006	Stegastes_partitus
ENSDARG00000035719	arl5c	100	82.123	ENSTRUG00000022814	arl5c	100	82.123	Takifugu_rubripes
ENSDARG00000035719	arl5c	100	79.888	ENSTNIG00000003015	arl5c	99	79.888	Tetraodon_nigroviridis
ENSDARG00000035719	arl5c	99	82.022	ENSXCOG00000017380	arl5c	99	82.022	Xiphophorus_couchianus
ENSDARG00000035719	arl5c	99	82.584	ENSXMAG00000008447	arl5c	99	82.584	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005802	trans-Golgi network	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	21873635.	IBA	Process
GO:1903292	protein localization to Golgi membrane	21873635.	IBA	Process