EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000036069 (Gene tree)
Gene ID: 393917
Gene Symbol: ddx39b
Alias: bat1|zgc:63773
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 18698 bases
Position: chr19:27339848-27358545
Accession: ZDB-GENE-040426-1259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000052354	ResIII	PF04851.15	1.5e-07	1	1
ENSDARP00000144813	ResIII	PF04851.15	1.5e-07	1	1
ENSDARP00000052354	DEAD	PF00270.29	1.1e-37	1	1
ENSDARP00000144813	DEAD	PF00270.29	1.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000184687	-	2708	-	ENSDARP00000144813	435 (aa)	-	Q7SXU7
ENSDART00000149515	-	413	-	-	- (aa)	-	-
ENSDART00000052355	-	1928	-	ENSDARP00000052354	435 (aa)	-	Q7SXU7

Gene Model

Click here to download ENSDARG00000036069's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG
dre03015	mRNA surveillance pathway	KEGG
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000036069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000036069	ddx39b	100	86.897	ENSDARG00000015111	ddx39ab	100	86.667
ENSDARG00000036069	ddx39b	93	36.790	ENSDARG00000016477	eif4a2	92	37.760
ENSDARG00000036069	ddx39b	87	35.789	ENSDARG00000018425	ddx61	78	35.789
ENSDARG00000036069	ddx39b	87	36.053	ENSDARG00000061338	ddx6	77	36.053
ENSDARG00000036069	ddx39b	86	32.723	ENSDARG00000012899	ddx49	80	32.723
ENSDARG00000036069	ddx39b	86	30.130	ENSDARG00000022177	ddx59	75	30.130
ENSDARG00000036069	ddx39b	100	84.773	ENSDARG00000006225	ddx39aa	100	85.977
ENSDARG00000036069	ddx39b	84	38.356	ENSDARG00000102978	eif4a3	90	38.108
ENSDARG00000036069	ddx39b	94	36.650	ENSDARG00000003032	eif4a1b	90	38.108
ENSDARG00000036069	ddx39b	85	30.952	ENSDARG00000044325	zgc:193690	79	30.952
ENSDARG00000036069	ddx39b	84	30.513	ENSDARG00000005774	ddx3xb	97	31.379
ENSDARG00000036069	ddx39b	85	37.736	ENSDARG00000092115	eif4a1a	90	37.838
ENSDARG00000036069	ddx39b	85	30.504	ENSDARG00000022614	ddx43	52	30.504
ENSDARG00000036069	ddx39b	85	31.926	ENSDARG00000005699	ddx19	77	32.011

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000036069	ddx39b	100	92.414	ENSG00000198563	DDX39B	100	92.184	Homo_sapiens
ENSDARG00000036069	ddx39b	100	92.644	ENSAMEG00000009508	DDX39B	99	92.414	Ailuropoda_melanoleuca
ENSDARG00000036069	ddx39b	99	93.953	ENSACIG00000004534	ddx39b	98	94.186	Amphilophus_citrinellus
ENSDARG00000036069	ddx39b	100	93.563	ENSATEG00000012366	ddx39b	100	93.563	Anabas_testudineus
ENSDARG00000036069	ddx39b	100	92.431	ENSACAG00000012240	DDX39B	100	92.202	Anolis_carolinensis
ENSDARG00000036069	ddx39b	100	92.414	ENSANAG00000030372	DDX39B	100	92.184	Aotus_nancymaae
ENSDARG00000036069	ddx39b	99	92.627	ENSACLG00000018759	ddx39b	99	92.627	Astatotilapia_calliptera
ENSDARG00000036069	ddx39b	100	96.560	ENSAMXG00000017837	ddx39b	100	96.560	Astyanax_mexicanus
ENSDARG00000036069	ddx39b	100	92.644	ENSBTAG00000014490	DDX39B	100	92.414	Bos_taurus
ENSDARG00000036069	ddx39b	100	92.414	ENSCJAG00000003152	DDX39B	100	92.184	Callithrix_jacchus
ENSDARG00000036069	ddx39b	100	92.644	ENSCAFG00000000509	DDX39B	100	96.129	Canis_familiaris
ENSDARG00000036069	ddx39b	100	92.644	ENSCAFG00020020530	DDX39B	100	92.414	Canis_lupus_dingo
ENSDARG00000036069	ddx39b	100	92.644	ENSCHIG00000004579	DDX39B	100	92.414	Capra_hircus
ENSDARG00000036069	ddx39b	100	79.540	ENSTSYG00000029741	-	88	82.633	Carlito_syrichta
ENSDARG00000036069	ddx39b	100	92.414	ENSTSYG00000010226	-	100	92.184	Carlito_syrichta
ENSDARG00000036069	ddx39b	100	92.184	ENSCAPG00000010066	DDX39B	100	91.954	Cavia_aperea
ENSDARG00000036069	ddx39b	100	92.184	ENSCPOG00000002335	DDX39B	100	91.954	Cavia_porcellus
ENSDARG00000036069	ddx39b	100	92.414	ENSCCAG00000027897	DDX39B	100	92.184	Cebus_capucinus
ENSDARG00000036069	ddx39b	99	83.102	ENSCATG00000043709	DDX39B	99	82.870	Cercocebus_atys
ENSDARG00000036069	ddx39b	100	92.184	ENSCLAG00000014555	DDX39B	100	91.954	Chinchilla_lanigera
ENSDARG00000036069	ddx39b	99	92.130	ENSCSAG00000008517	DDX39B	100	91.898	Chlorocebus_sabaeus
ENSDARG00000036069	ddx39b	63	95.971	ENSCPBG00000014671	-	100	95.971	Chrysemys_picta_bellii
ENSDARG00000036069	ddx39b	100	92.414	ENSCANG00000041217	DDX39B	100	92.184	Colobus_angolensis_palliatus
ENSDARG00000036069	ddx39b	82	81.285	ENSCGRG00001021916	-	89	81.285	Cricetulus_griseus_chok1gshd
ENSDARG00000036069	ddx39b	58	88.889	ENSCGRG00001017315	-	95	86.385	Cricetulus_griseus_chok1gshd
ENSDARG00000036069	ddx39b	58	88.889	ENSCGRG00000012479	-	76	88.492	Cricetulus_griseus_crigri
ENSDARG00000036069	ddx39b	100	92.414	ENSDNOG00000010215	DDX39B	100	92.184	Dasypus_novemcinctus
ENSDARG00000036069	ddx39b	88	92.388	ENSDORG00000004985	Ddx39b	100	92.126	Dipodomys_ordii
ENSDARG00000036069	ddx39b	88	79.265	ENSETEG00000009649	DDX39B	87	79.003	Echinops_telfairi
ENSDARG00000036069	ddx39b	100	92.414	ENSEASG00005017156	DDX39B	100	92.184	Equus_asinus_asinus
ENSDARG00000036069	ddx39b	100	92.414	ENSECAG00000007750	DDX39B	100	92.184	Equus_caballus
ENSDARG00000036069	ddx39b	100	92.414	ENSELUG00000017904	ddx39b	100	92.184	Esox_lucius
ENSDARG00000036069	ddx39b	100	92.644	ENSFCAG00000004497	DDX39B	100	92.414	Felis_catus
ENSDARG00000036069	ddx39b	100	92.184	ENSFDAG00000011074	DDX39B	100	91.954	Fukomys_damarensis
ENSDARG00000036069	ddx39b	73	96.519	ENSGAGG00000001300	-	80	96.519	Gopherus_agassizii
ENSDARG00000036069	ddx39b	100	92.414	ENSGGOG00000005989	DDX39B	100	92.184	Gorilla_gorilla
ENSDARG00000036069	ddx39b	100	91.494	ENSHGLG00000019248	DDX39B	100	91.724	Heterocephalus_glaber_female
ENSDARG00000036069	ddx39b	100	91.494	ENSHGLG00100011850	DDX39B	100	91.724	Heterocephalus_glaber_male
ENSDARG00000036069	ddx39b	100	94.725	ENSIPUG00000015733	DDX39B	94	94.954	Ictalurus_punctatus
ENSDARG00000036069	ddx39b	100	91.954	ENSSTOG00000012838	DDX39B	100	91.724	Ictidomys_tridecemlineatus
ENSDARG00000036069	ddx39b	100	91.724	ENSJJAG00000005660	-	100	91.494	Jaculus_jaculus
ENSDARG00000036069	ddx39b	65	80.427	ENSLBEG00000017177	-	81	80.427	Labrus_bergylta
ENSDARG00000036069	ddx39b	99	78.605	ENSLBEG00000012254	ddx39b	99	77.907	Labrus_bergylta
ENSDARG00000036069	ddx39b	100	83.673	ENSLACG00000002110	DDX39B	100	83.447	Latimeria_chalumnae
ENSDARG00000036069	ddx39b	100	92.184	ENSLAFG00000014202	DDX39B	100	91.954	Loxodonta_africana
ENSDARG00000036069	ddx39b	100	92.414	ENSMFAG00000034233	DDX39B	100	92.184	Macaca_fascicularis
ENSDARG00000036069	ddx39b	100	92.414	ENSMMUG00000008839	DDX39B	100	92.184	Macaca_mulatta
ENSDARG00000036069	ddx39b	100	92.414	ENSMNEG00000041059	DDX39B	100	92.184	Macaca_nemestrina
ENSDARG00000036069	ddx39b	100	92.414	ENSMLEG00000043791	DDX39B	100	92.184	Mandrillus_leucophaeus
ENSDARG00000036069	ddx39b	99	92.857	ENSMZEG00005017654	ddx39b	99	92.857	Maylandia_zebra
ENSDARG00000036069	ddx39b	100	91.954	ENSMAUG00000008059	Ddx39b	100	91.724	Mesocricetus_auratus
ENSDARG00000036069	ddx39b	100	92.414	ENSMICG00000017349	DDX39B	100	92.184	Microcebus_murinus
ENSDARG00000036069	ddx39b	100	92.184	ENSMOCG00000011169	Ddx39b	100	91.954	Microtus_ochrogaster
ENSDARG00000036069	ddx39b	88	91.906	ENSMODG00000015791	DDX39B	88	91.645	Monodelphis_domestica
ENSDARG00000036069	ddx39b	100	92.184	ENSMUSG00000019432	Ddx39b	100	95.946	Mus_musculus
ENSDARG00000036069	ddx39b	100	92.184	MGP_PahariEiJ_G0020513	Ddx39b	100	95.946	Mus_pahari
ENSDARG00000036069	ddx39b	100	92.184	MGP_SPRETEiJ_G0022424	Ddx39b	100	92.184	Mus_spretus
ENSDARG00000036069	ddx39b	100	92.644	ENSMPUG00000011407	DDX39B	100	92.414	Mustela_putorius_furo
ENSDARG00000036069	ddx39b	71	96.141	ENSMLUG00000001681	DDX39B	100	96.141	Myotis_lucifugus
ENSDARG00000036069	ddx39b	100	92.414	ENSNGAG00000022948	Ddx39b	100	92.184	Nannospalax_galili
ENSDARG00000036069	ddx39b	66	95.486	ENSNLEG00000006094	DDX39B	81	95.486	Nomascus_leucogenys
ENSDARG00000036069	ddx39b	86	97.297	ENSMEUG00000008264	DDX39B	86	97.297	Notamacropus_eugenii
ENSDARG00000036069	ddx39b	100	92.644	ENSOPRG00000011923	DDX39B	100	92.414	Ochotona_princeps
ENSDARG00000036069	ddx39b	100	92.414	ENSODEG00000018083	DDX39B	100	92.184	Octodon_degus
ENSDARG00000036069	ddx39b	100	93.563	ENSONIG00000004740	ddx39b	100	93.793	Oreochromis_niloticus
ENSDARG00000036069	ddx39b	56	88.115	ENSOANG00000008361	DDX39B	95	87.705	Ornithorhynchus_anatinus
ENSDARG00000036069	ddx39b	100	89.333	ENSOCUG00000024126	DDX39B	100	89.111	Oryctolagus_cuniculus
ENSDARG00000036069	ddx39b	82	88.503	ENSOGAG00000009067	-	100	94.753	Otolemur_garnettii
ENSDARG00000036069	ddx39b	100	91.514	ENSOGAG00000028850	-	100	91.284	Otolemur_garnettii
ENSDARG00000036069	ddx39b	100	92.644	ENSOARG00000008787	DDX39B	98	92.414	Ovis_aries
ENSDARG00000036069	ddx39b	100	92.414	ENSPPAG00000043072	DDX39B	100	92.184	Pan_paniscus
ENSDARG00000036069	ddx39b	100	92.644	ENSPPRG00000001913	DDX39B	100	92.414	Panthera_pardus
ENSDARG00000036069	ddx39b	100	92.184	ENSPTIG00000017669	DDX39B	100	91.724	Panthera_tigris_altaica
ENSDARG00000036069	ddx39b	100	92.414	ENSPTRG00000032509	DDX39B	100	92.184	Pan_troglodytes
ENSDARG00000036069	ddx39b	100	92.414	ENSPANG00000018609	DDX39B	100	92.184	Papio_anubis
ENSDARG00000036069	ddx39b	100	94.508	ENSPKIG00000011324	ddx39b	100	94.508	Paramormyrops_kingsleyae
ENSDARG00000036069	ddx39b	100	91.954	ENSPEMG00000016905	Ddx39b	100	91.954	Peromyscus_maniculatus_bairdii
ENSDARG00000036069	ddx39b	100	92.414	ENSPCIG00000017572	DDX39B	100	92.184	Phascolarctos_cinereus
ENSDARG00000036069	ddx39b	100	92.414	ENSPPYG00000016433	DDX39B	100	92.184	Pongo_abelii
ENSDARG00000036069	ddx39b	65	95.775	ENSPCAG00000003484	DDX39B	100	95.775	Procavia_capensis
ENSDARG00000036069	ddx39b	100	92.414	ENSPCOG00000018656	DDX39B	100	92.184	Propithecus_coquereli
ENSDARG00000036069	ddx39b	100	92.414	ENSPVAG00000004653	DDX39B	100	92.184	Pteropus_vampyrus
ENSDARG00000036069	ddx39b	99	84.186	ENSPNYG00000010382	ddx39b	98	84.186	Pundamilia_nyererei
ENSDARG00000036069	ddx39b	100	96.789	ENSPNAG00000026926	ddx39b	100	96.789	Pygocentrus_nattereri
ENSDARG00000036069	ddx39b	100	92.184	ENSRNOG00000000841	Ddx39b	100	92.184	Rattus_norvegicus
ENSDARG00000036069	ddx39b	100	82.299	ENSRBIG00000031309	DDX39B	100	82.069	Rhinopithecus_bieti
ENSDARG00000036069	ddx39b	100	92.414	ENSRROG00000039517	DDX39B	100	92.184	Rhinopithecus_roxellana
ENSDARG00000036069	ddx39b	100	82.299	ENSSBOG00000035513	-	100	82.069	Saimiri_boliviensis_boliviensis
ENSDARG00000036069	ddx39b	100	92.414	ENSSHAG00000003209	DDX39B	100	92.184	Sarcophilus_harrisii
ENSDARG00000036069	ddx39b	100	94.279	ENSSFOG00015016107	ddx39b	100	94.279	Scleropages_formosus
ENSDARG00000036069	ddx39b	100	94.023	ENSSDUG00000011557	ddx39b	100	94.023	Seriola_dumerili
ENSDARG00000036069	ddx39b	100	94.253	ENSSLDG00000015763	ddx39b	100	94.253	Seriola_lalandi_dorsalis
ENSDARG00000036069	ddx39b	88	80.840	ENSSARG00000005245	DDX39B	100	80.577	Sorex_araneus
ENSDARG00000036069	ddx39b	100	92.644	ENSSPUG00000012805	DDX39B	100	92.414	Sphenodon_punctatus
ENSDARG00000036069	ddx39b	100	92.414	ENSSSCG00000001400	DDX39B	100	96.532	Sus_scrofa
ENSDARG00000036069	ddx39b	100	69.885	ENSTBEG00000003721	DDX39B	100	69.655	Tupaia_belangeri
ENSDARG00000036069	ddx39b	100	84.773	ENSTTRG00000014074	DDX39B	100	84.773	Tursiops_truncatus
ENSDARG00000036069	ddx39b	100	80.320	ENSUAMG00000027335	DDX39B	100	80.092	Ursus_americanus
ENSDARG00000036069	ddx39b	100	83.908	ENSUMAG00000015124	DDX39B	100	83.678	Ursus_maritimus
ENSDARG00000036069	ddx39b	62	82.500	ENSVPAG00000009167	-	74	81.667	Vicugna_pacos
ENSDARG00000036069	ddx39b	100	92.644	ENSVVUG00000019518	DDX39B	99	92.414	Vulpes_vulpes
ENSDARG00000036069	ddx39b	100	81.693	ENSXETG00000002498	ddx39b	99	81.465	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function