EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000036394 (Gene tree)
Gene ID: 100004610
Gene Symbol: pop7
Alias: fj61g07|wu:fj61g07|zgc:103779
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 1215 bases
Position: chr7:21887307-21888521
Accession: ZDB-GENE-041010-88
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000052870	Alba	PF01918.21	5.2e-11	1	1
ENSDARP00000131813	Alba	PF01918.21	5.2e-11	1	1
ENSDARP00000052870	Rpp20	PF12328.8	1.9e-18	1	1
ENSDARP00000131813	Rpp20	PF12328.8	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000052871	-	854	-	ENSDARP00000052870	148 (aa)	-	Q5XJ22
ENSDART00000162252	-	475	-	ENSDARP00000131813	148 (aa)	-	Q5XJ22

Gene Model

Click here to download ENSDARG00000036394's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000036394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000036394	pop7	86	68.889	ENSG00000172336	POP7	94	70.229	Homo_sapiens
ENSDARG00000036394	pop7	82	88.710	ENSAPOG00000015722	pop7	91	88.710	Acanthochromis_polyacanthus
ENSDARG00000036394	pop7	84	85.827	ENSACIG00000022071	pop7	94	85.827	Amphilophus_citrinellus
ENSDARG00000036394	pop7	99	77.181	ENSAOCG00000021222	pop7	98	77.181	Amphiprion_ocellaris
ENSDARG00000036394	pop7	99	77.181	ENSAPEG00000018819	pop7	98	77.181	Amphiprion_percula
ENSDARG00000036394	pop7	83	88.800	ENSATEG00000017615	pop7	83	88.800	Anabas_testudineus
ENSDARG00000036394	pop7	82	71.094	ENSANAG00000019054	POP7	90	71.094	Aotus_nancymaae
ENSDARG00000036394	pop7	99	77.181	ENSACLG00000018898	pop7	99	77.181	Astatotilapia_calliptera
ENSDARG00000036394	pop7	85	88.372	ENSAMXG00000025789	pop7	91	88.372	Astyanax_mexicanus
ENSDARG00000036394	pop7	82	71.094	ENSCJAG00000015056	POP7	90	71.094	Callithrix_jacchus
ENSDARG00000036394	pop7	86	68.148	ENSCAFG00000014205	POP7	95	68.148	Canis_familiaris
ENSDARG00000036394	pop7	86	68.148	ENSCAFG00020013863	POP7	95	68.148	Canis_lupus_dingo
ENSDARG00000036394	pop7	86	68.889	ENSCHIG00000013484	POP7	95	68.889	Capra_hircus
ENSDARG00000036394	pop7	86	68.889	ENSTSYG00000035016	POP7	95	68.889	Carlito_syrichta
ENSDARG00000036394	pop7	86	69.630	ENSCPOG00000005767	POP7	95	69.630	Cavia_porcellus
ENSDARG00000036394	pop7	82	71.094	ENSCCAG00000008898	POP7	90	71.094	Cebus_capucinus
ENSDARG00000036394	pop7	86	68.889	ENSCATG00000010371	POP7	95	68.889	Cercocebus_atys
ENSDARG00000036394	pop7	86	69.630	ENSCLAG00000001541	POP7	95	69.630	Chinchilla_lanigera
ENSDARG00000036394	pop7	86	68.889	ENSCSAG00000017937	POP7	95	68.889	Chlorocebus_sabaeus
ENSDARG00000036394	pop7	86	68.889	ENSCANG00000000652	POP7	95	68.889	Colobus_angolensis_palliatus
ENSDARG00000036394	pop7	86	68.889	ENSCGRG00001010593	Pop7	95	68.889	Cricetulus_griseus_chok1gshd
ENSDARG00000036394	pop7	86	68.889	ENSCGRG00000019940	Pop7	95	68.889	Cricetulus_griseus_crigri
ENSDARG00000036394	pop7	83	87.200	ENSCSEG00000013197	pop7	97	87.200	Cynoglossus_semilaevis
ENSDARG00000036394	pop7	100	78.667	ENSCVAG00000016728	pop7	99	78.667	Cyprinodon_variegatus
ENSDARG00000036394	pop7	82	71.875	ENSDNOG00000031207	POP7	57	71.875	Dasypus_novemcinctus
ENSDARG00000036394	pop7	82	71.875	ENSDORG00000012512	Pop7	90	71.875	Dipodomys_ordii
ENSDARG00000036394	pop7	74	46.847	FBgn0066304	Rpp20	65	46.847	Drosophila_melanogaster
ENSDARG00000036394	pop7	81	70.866	ENSETEG00000007941	POP7	91	70.866	Echinops_telfairi
ENSDARG00000036394	pop7	86	68.148	ENSEASG00005016994	POP7	95	68.148	Equus_asinus_asinus
ENSDARG00000036394	pop7	86	68.148	ENSECAG00000010383	POP7	95	68.148	Equus_caballus
ENSDARG00000036394	pop7	74	88.393	ENSELUG00000023947	pop7	88	88.393	Esox_lucius
ENSDARG00000036394	pop7	86	68.148	ENSFCAG00000006849	POP7	95	68.148	Felis_catus
ENSDARG00000036394	pop7	86	68.889	ENSFDAG00000018839	POP7	95	68.889	Fukomys_damarensis
ENSDARG00000036394	pop7	100	78.667	ENSFHEG00000012595	pop7	99	78.667	Fundulus_heteroclitus
ENSDARG00000036394	pop7	100	80.000	ENSGAFG00000017633	pop7	99	80.000	Gambusia_affinis
ENSDARG00000036394	pop7	99	79.195	ENSGACG00000019931	pop7	99	79.195	Gasterosteus_aculeatus
ENSDARG00000036394	pop7	86	68.889	ENSGGOG00000016492	POP7	95	68.889	Gorilla_gorilla
ENSDARG00000036394	pop7	81	86.066	ENSHBUG00000011987	pop7	92	86.066	Haplochromis_burtoni
ENSDARG00000036394	pop7	82	71.094	ENSHGLG00000018118	POP7	90	71.094	Heterocephalus_glaber_female
ENSDARG00000036394	pop7	82	71.094	ENSHGLG00100007908	POP7	90	71.094	Heterocephalus_glaber_male
ENSDARG00000036394	pop7	100	75.497	ENSHCOG00000010137	pop7	100	75.497	Hippocampus_comes
ENSDARG00000036394	pop7	99	81.333	ENSIPUG00000000411	pop7	99	81.333	Ictalurus_punctatus
ENSDARG00000036394	pop7	86	68.889	ENSSTOG00000030883	POP7	95	68.889	Ictidomys_tridecemlineatus
ENSDARG00000036394	pop7	86	68.889	ENSJJAG00000003989	Pop7	95	68.889	Jaculus_jaculus
ENSDARG00000036394	pop7	100	80.392	ENSKMAG00000010696	pop7	99	80.392	Kryptolebias_marmoratus
ENSDARG00000036394	pop7	97	76.552	ENSLBEG00000008621	pop7	94	76.552	Labrus_bergylta
ENSDARG00000036394	pop7	82	88.618	ENSLBEG00000003483	pop7	88	88.618	Labrus_bergylta
ENSDARG00000036394	pop7	82	76.423	ENSLACG00000010203	POP7	86	76.423	Latimeria_chalumnae
ENSDARG00000036394	pop7	98	76.510	ENSLOCG00000017553	pop7	97	77.852	Lepisosteus_oculatus
ENSDARG00000036394	pop7	82	67.442	ENSLAFG00000030032	POP7	93	67.442	Loxodonta_africana
ENSDARG00000036394	pop7	86	68.889	ENSMFAG00000027783	POP7	95	68.889	Macaca_fascicularis
ENSDARG00000036394	pop7	86	68.889	ENSMMUG00000008581	POP7	95	68.889	Macaca_mulatta
ENSDARG00000036394	pop7	86	68.889	ENSMNEG00000037495	POP7	95	68.889	Macaca_nemestrina
ENSDARG00000036394	pop7	86	68.889	ENSMLEG00000027597	POP7	95	68.889	Mandrillus_leucophaeus
ENSDARG00000036394	pop7	82	89.431	ENSMAMG00000007258	pop7	88	89.431	Mastacembelus_armatus
ENSDARG00000036394	pop7	81	86.066	ENSMZEG00005005138	pop7	92	86.066	Maylandia_zebra
ENSDARG00000036394	pop7	86	85.271	ENSMZEG00005022194	-	88	85.271	Maylandia_zebra
ENSDARG00000036394	pop7	82	71.094	ENSMAUG00000015820	Pop7	90	71.094	Mesocricetus_auratus
ENSDARG00000036394	pop7	86	68.889	ENSMICG00000009398	POP7	95	68.889	Microcebus_murinus
ENSDARG00000036394	pop7	82	71.094	ENSMOCG00000013694	Pop7	90	71.094	Microtus_ochrogaster
ENSDARG00000036394	pop7	84	85.714	ENSMMOG00000014095	pop7	91	85.714	Mola_mola
ENSDARG00000036394	pop7	84	68.657	ENSMODG00000023662	POP7	92	69.173	Monodelphis_domestica
ENSDARG00000036394	pop7	83	87.200	ENSMALG00000011180	pop7	96	87.200	Monopterus_albus
ENSDARG00000036394	pop7	82	71.094	MGP_CAROLIEiJ_G0027876	Pop7	90	71.094	Mus_caroli
ENSDARG00000036394	pop7	82	71.094	ENSMUSG00000029715	Pop7	90	71.094	Mus_musculus
ENSDARG00000036394	pop7	86	68.889	MGP_PahariEiJ_G0024462	Pop7	95	68.889	Mus_pahari
ENSDARG00000036394	pop7	82	71.094	MGP_SPRETEiJ_G0028881	Pop7	90	71.094	Mus_spretus
ENSDARG00000036394	pop7	86	68.889	ENSMPUG00000019765	POP7	95	68.889	Mustela_putorius_furo
ENSDARG00000036394	pop7	82	71.875	ENSMLUG00000010110	POP7	90	71.875	Myotis_lucifugus
ENSDARG00000036394	pop7	100	63.226	ENSNGAG00000021630	Pop7	99	63.226	Nannospalax_galili
ENSDARG00000036394	pop7	88	83.704	ENSNBRG00000006286	pop7	99	83.704	Neolamprologus_brichardi
ENSDARG00000036394	pop7	86	68.889	ENSNLEG00000011939	POP7	95	68.889	Nomascus_leucogenys
ENSDARG00000036394	pop7	50	72.973	ENSOPRG00000015185	POP7	96	72.973	Ochotona_princeps
ENSDARG00000036394	pop7	86	69.630	ENSODEG00000020363	POP7	95	69.630	Octodon_degus
ENSDARG00000036394	pop7	86	72.441	ENSOANG00000001658	POP7	95	72.441	Ornithorhynchus_anatinus
ENSDARG00000036394	pop7	99	64.052	ENSOCUG00000007818	POP7	96	64.052	Oryctolagus_cuniculus
ENSDARG00000036394	pop7	81	88.525	ENSORLG00000003594	pop7	88	88.525	Oryzias_latipes
ENSDARG00000036394	pop7	82	88.618	ENSORLG00020017530	pop7	75	88.618	Oryzias_latipes_hni
ENSDARG00000036394	pop7	82	89.431	ENSORLG00015015310	pop7	90	89.431	Oryzias_latipes_hsok
ENSDARG00000036394	pop7	80	89.256	ENSOMEG00000003667	pop7	81	89.256	Oryzias_melastigma
ENSDARG00000036394	pop7	82	71.094	ENSOGAG00000009340	POP7	90	71.094	Otolemur_garnettii
ENSDARG00000036394	pop7	86	68.889	ENSPPAG00000015339	POP7	95	68.889	Pan_paniscus
ENSDARG00000036394	pop7	86	68.148	ENSPPRG00000018408	POP7	95	68.148	Panthera_pardus
ENSDARG00000036394	pop7	86	68.148	ENSPTIG00000005807	POP7	95	68.148	Panthera_tigris_altaica
ENSDARG00000036394	pop7	86	68.889	ENSPTRG00000019504	POP7	95	68.889	Pan_troglodytes
ENSDARG00000036394	pop7	86	68.889	ENSPTRG00000047460	-	95	68.889	Pan_troglodytes
ENSDARG00000036394	pop7	86	68.889	ENSPANG00000006196	POP7	95	68.889	Papio_anubis
ENSDARG00000036394	pop7	82	83.200	ENSPKIG00000019869	pop7	73	86.400	Paramormyrops_kingsleyae
ENSDARG00000036394	pop7	68	67.961	ENSPSIG00000000415	POP7	92	68.067	Pelodiscus_sinensis
ENSDARG00000036394	pop7	89	81.481	ENSPMGG00000011142	pop7	98	81.481	Periophthalmus_magnuspinnatus
ENSDARG00000036394	pop7	82	71.094	ENSPEMG00000011583	Pop7	90	71.094	Peromyscus_maniculatus_bairdii
ENSDARG00000036394	pop7	84	70.677	ENSPCIG00000000517	POP7	66	70.677	Phascolarctos_cinereus
ENSDARG00000036394	pop7	100	80.000	ENSPFOG00000019976	pop7	99	80.000	Poecilia_formosa
ENSDARG00000036394	pop7	100	80.000	ENSPLAG00000007700	pop7	99	80.000	Poecilia_latipinna
ENSDARG00000036394	pop7	100	80.000	ENSPMEG00000010673	pop7	99	80.000	Poecilia_mexicana
ENSDARG00000036394	pop7	100	80.000	ENSPREG00000015137	pop7	99	80.000	Poecilia_reticulata
ENSDARG00000036394	pop7	86	68.889	ENSPPYG00000017426	POP7	95	68.889	Pongo_abelii
ENSDARG00000036394	pop7	82	69.767	ENSPCAG00000010445	POP7	91	69.767	Procavia_capensis
ENSDARG00000036394	pop7	76	67.227	ENSPCOG00000018009	-	87	67.227	Propithecus_coquereli
ENSDARG00000036394	pop7	86	68.889	ENSPCOG00000009302	POP7	95	68.889	Propithecus_coquereli
ENSDARG00000036394	pop7	81	86.066	ENSPNYG00000000975	pop7	92	86.066	Pundamilia_nyererei
ENSDARG00000036394	pop7	84	88.976	ENSPNAG00000007206	pop7	91	88.976	Pygocentrus_nattereri
ENSDARG00000036394	pop7	82	71.094	ENSRNOG00000025310	Pop7	90	71.094	Rattus_norvegicus
ENSDARG00000036394	pop7	86	68.889	ENSRBIG00000002671	POP7	95	68.889	Rhinopithecus_bieti
ENSDARG00000036394	pop7	86	68.889	ENSRROG00000028543	POP7	95	68.889	Rhinopithecus_roxellana
ENSDARG00000036394	pop7	82	71.875	ENSSBOG00000005173	POP7	90	71.875	Saimiri_boliviensis_boliviensis
ENSDARG00000036394	pop7	82	70.000	ENSSHAG00000001026	POP7	90	70.000	Sarcophilus_harrisii
ENSDARG00000036394	pop7	83	85.827	ENSSFOG00015007957	pop7	86	85.827	Scleropages_formosus
ENSDARG00000036394	pop7	82	88.710	ENSSMAG00000015536	pop7	92	88.710	Scophthalmus_maximus
ENSDARG00000036394	pop7	93	79.167	ENSSDUG00000022172	pop7	98	79.167	Seriola_dumerili
ENSDARG00000036394	pop7	74	85.586	ENSSLDG00000019818	pop7	90	85.586	Seriola_lalandi_dorsalis
ENSDARG00000036394	pop7	100	76.000	ENSSPAG00000000652	pop7	93	76.000	Stegastes_partitus
ENSDARG00000036394	pop7	86	68.889	ENSSSCG00000007672	POP7	95	68.889	Sus_scrofa
ENSDARG00000036394	pop7	83	87.200	ENSTRUG00000024340	-	91	87.200	Takifugu_rubripes
ENSDARG00000036394	pop7	100	76.667	ENSTRUG00000023845	pop7	99	76.667	Takifugu_rubripes
ENSDARG00000036394	pop7	100	76.000	ENSTNIG00000001259	pop7	99	76.000	Tetraodon_nigroviridis
ENSDARG00000036394	pop7	86	68.889	ENSTBEG00000001849	POP7	95	68.889	Tupaia_belangeri
ENSDARG00000036394	pop7	86	68.148	ENSTTRG00000011012	POP7	95	68.148	Tursiops_truncatus
ENSDARG00000036394	pop7	87	68.382	ENSUAMG00000028076	POP7	94	68.382	Ursus_americanus
ENSDARG00000036394	pop7	87	68.382	ENSUMAG00000010895	POP7	94	68.382	Ursus_maritimus
ENSDARG00000036394	pop7	86	68.148	ENSVVUG00000023472	POP7	95	68.148	Vulpes_vulpes
ENSDARG00000036394	pop7	100	78.000	ENSXCOG00000012016	pop7	98	78.000	Xiphophorus_couchianus
ENSDARG00000036394	pop7	100	80.000	ENSXMAG00000019746	pop7	99	80.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process