EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000036778 (Gene tree)
Gene ID: 324267
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1-like translational GTPase
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 46331 bases
Position: chr23:31764061-31810391
Accession: ZDB-GENE-030131-2987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149206	GTP_EFTU	PF00009.27	6.9e-47	1	1
ENSDARP00000154221	GTP_EFTU	PF00009.27	7.1e-47	1	1
ENSDARP00000118572	GTP_EFTU	PF00009.27	7.3e-47	1	1
ENSDARP00000149206	MMR_HSR1	PF01926.23	4.5e-06	1	1
ENSDARP00000154221	MMR_HSR1	PF01926.23	4.7e-06	1	1
ENSDARP00000118572	MMR_HSR1	PF01926.23	4.8e-06	1	1
ENSDARP00000149206	GTP_EFTU_D2	PF03144.25	6.6e-09	1	1
ENSDARP00000154221	GTP_EFTU_D2	PF03144.25	6.7e-09	1	1
ENSDARP00000118572	GTP_EFTU_D2	PF03144.25	6.9e-09	1	1
ENSDARP00000149206	GTP_EFTU_D3	PF03143.17	2.1e-28	1	1
ENSDARP00000118572	GTP_EFTU_D3	PF03143.17	2.2e-28	1	1
ENSDARP00000154221	GTP_EFTU_D3	PF03143.17	2.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000189749	-	7444	-	ENSDARP00000149206	662 (aa)	-	A0A2R8Q5A1
ENSDART00000139076	-	2424	-	ENSDARP00000118572	682 (aa)	-	F1Q5Z6
ENSDART00000137278	-	643	-	-	- (aa)	-	-
ENSDART00000134319	-	1204	XM_017353518	ENSDARP00000118896	362 (aa)	XP_017209007	E9QHS3
ENSDART00000180850	-	7535	-	ENSDARP00000154221	675 (aa)	-	A0A2R8QME1

Gene Model

Click here to download ENSDARG00000036778's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000036778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000036778	hbs1l	64	40.138	ENSDARG00000006838	eef1a2	94	40.503
ENSDARG00000036778	hbs1l	64	39.679	ENSDARG00000071727	si:dkey-37o8.1	90	39.770
ENSDARG00000036778	hbs1l	68	39.159	ENSDARG00000098627	gspt1l	84	37.743
ENSDARG00000036778	hbs1l	64	41.284	ENSDARG00000069951	eef1a1b	95	41.648
ENSDARG00000036778	hbs1l	64	41.284	ENSDARG00000039502	eef1a1a	96	54.040
ENSDARG00000036778	hbs1l	64	40.706	ENSDARG00000031048	gspt1	75	40.654
ENSDARG00000036778	hbs1l	65	41.230	ENSDARG00000020850	eef1a1l1	95	41.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000036778	hbs1l	100	72.150	ENSG00000112339	HBS1L	100	91.304	Homo_sapiens
ENSDARG00000036778	hbs1l	82	92.493	ENSAPOG00000013169	hbs1l	91	92.493	Acanthochromis_polyacanthus
ENSDARG00000036778	hbs1l	99	72.439	ENSAMEG00000009749	HBS1L	99	71.717	Ailuropoda_melanoleuca
ENSDARG00000036778	hbs1l	80	85.444	ENSACIG00000017087	hbs1l	91	85.795	Amphilophus_citrinellus
ENSDARG00000036778	hbs1l	100	79.399	ENSAPEG00000008320	hbs1l	100	79.399	Amphiprion_percula
ENSDARG00000036778	hbs1l	100	80.170	ENSATEG00000004459	hbs1l	100	80.028	Anabas_testudineus
ENSDARG00000036778	hbs1l	100	70.414	ENSAPLG00000007791	HBS1L	100	70.674	Anas_platyrhynchos
ENSDARG00000036778	hbs1l	100	71.573	ENSACAG00000010120	HBS1L	100	70.851	Anolis_carolinensis
ENSDARG00000036778	hbs1l	100	72.334	ENSANAG00000038076	HBS1L	99	91.304	Aotus_nancymaae
ENSDARG00000036778	hbs1l	100	79.256	ENSACLG00000010469	hbs1l	100	79.256	Astatotilapia_calliptera
ENSDARG00000036778	hbs1l	100	86.880	ENSAMXG00000004260	hbs1l	100	87.135	Astyanax_mexicanus
ENSDARG00000036778	hbs1l	100	72.767	ENSBTAG00000020174	HBS1L	100	71.902	Bos_taurus
ENSDARG00000036778	hbs1l	69	47.246	WBGene00010622	K07A12.4	79	47.458	Caenorhabditis_elegans
ENSDARG00000036778	hbs1l	100	72.478	ENSCJAG00000007678	HBS1L	99	91.304	Callithrix_jacchus
ENSDARG00000036778	hbs1l	100	72.006	ENSCAFG00000000226	HBS1L	100	71.284	Canis_familiaris
ENSDARG00000036778	hbs1l	100	72.006	ENSCAFG00020021904	HBS1L	100	71.284	Canis_lupus_dingo
ENSDARG00000036778	hbs1l	100	72.478	ENSCHIG00000010299	HBS1L	100	71.614	Capra_hircus
ENSDARG00000036778	hbs1l	100	71.326	ENSTSYG00000007089	HBS1L	94	86.957	Carlito_syrichta
ENSDARG00000036778	hbs1l	99	64.234	ENSCPOG00000007015	HBS1L	99	64.192	Cavia_porcellus
ENSDARG00000036778	hbs1l	100	70.920	ENSCCAG00000033863	HBS1L	91	88.462	Cebus_capucinus
ENSDARG00000036778	hbs1l	100	72.086	ENSCATG00000043042	HBS1L	97	91.304	Cercocebus_atys
ENSDARG00000036778	hbs1l	100	71.942	ENSCLAG00000004937	HBS1L	100	71.552	Chinchilla_lanigera
ENSDARG00000036778	hbs1l	100	72.190	ENSCSAG00000016791	HBS1L	100	71.470	Chlorocebus_sabaeus
ENSDARG00000036778	hbs1l	99	57.036	ENSCHOG00000001852	HBS1L	99	57.058	Choloepus_hoffmanni
ENSDARG00000036778	hbs1l	100	71.573	ENSCPBG00000017635	HBS1L	100	70.815	Chrysemys_picta_bellii
ENSDARG00000036778	hbs1l	99	48.649	ENSCING00000005592	-	99	47.755	Ciona_intestinalis
ENSDARG00000036778	hbs1l	98	58.592	ENSCSAVG00000002297	-	99	60.000	Ciona_savignyi
ENSDARG00000036778	hbs1l	100	71.573	ENSCANG00000031208	HBS1L	97	91.304	Colobus_angolensis_palliatus
ENSDARG00000036778	hbs1l	100	72.414	ENSCGRG00001024531	Hbs1l	100	71.552	Cricetulus_griseus_chok1gshd
ENSDARG00000036778	hbs1l	100	72.414	ENSCGRG00000017361	Hbs1l	100	71.552	Cricetulus_griseus_crigri
ENSDARG00000036778	hbs1l	99	79.000	ENSCSEG00000002794	hbs1l	94	79.000	Cynoglossus_semilaevis
ENSDARG00000036778	hbs1l	100	77.054	ENSCVAG00000001462	hbs1l	100	77.054	Cyprinodon_variegatus
ENSDARG00000036778	hbs1l	100	71.243	ENSDORG00000005958	Hbs1l	100	71.182	Dipodomys_ordii
ENSDARG00000036778	hbs1l	99	47.067	FBgn0042712	HBS1	100	47.109	Drosophila_melanogaster
ENSDARG00000036778	hbs1l	100	66.762	ENSETEG00000000913	HBS1L	100	66.332	Echinops_telfairi
ENSDARG00000036778	hbs1l	99	58.561	ENSEBUG00000010759	hbs1l	100	65.557	Eptatretus_burgeri
ENSDARG00000036778	hbs1l	100	71.799	ENSEASG00005011148	HBS1L	100	70.791	Equus_asinus_asinus
ENSDARG00000036778	hbs1l	100	71.511	ENSECAG00000004470	HBS1L	100	70.791	Equus_caballus
ENSDARG00000036778	hbs1l	100	66.619	ENSEEUG00000013582	HBS1L	100	66.331	Erinaceus_europaeus
ENSDARG00000036778	hbs1l	92	65.764	ENSELUG00000006444	hbs1l	92	71.087	Esox_lucius
ENSDARG00000036778	hbs1l	100	72.439	ENSFCAG00000001810	HBS1L	95	91.304	Felis_catus
ENSDARG00000036778	hbs1l	89	73.211	ENSFALG00000011898	HBS1L	100	73.211	Ficedula_albicollis
ENSDARG00000036778	hbs1l	100	71.717	ENSFDAG00000011841	HBS1L	100	71.614	Fukomys_damarensis
ENSDARG00000036778	hbs1l	100	78.076	ENSFHEG00000006942	hbs1l	100	78.076	Fundulus_heteroclitus
ENSDARG00000036778	hbs1l	99	78.374	ENSGMOG00000011843	hbs1l	100	78.229	Gadus_morhua
ENSDARG00000036778	hbs1l	100	71.821	ENSGALG00000013962	HBS1L	100	71.821	Gallus_gallus
ENSDARG00000036778	hbs1l	100	78.895	ENSGAFG00000004157	hbs1l	100	78.895	Gambusia_affinis
ENSDARG00000036778	hbs1l	99	78.726	ENSGACG00000011035	hbs1l	100	78.292	Gasterosteus_aculeatus
ENSDARG00000036778	hbs1l	100	71.284	ENSGAGG00000002033	HBS1L	100	70.959	Gopherus_agassizii
ENSDARG00000036778	hbs1l	79	74.109	ENSGGOG00000034956	-	93	83.333	Gorilla_gorilla
ENSDARG00000036778	hbs1l	100	79.399	ENSHBUG00000013424	hbs1l	100	79.399	Haplochromis_burtoni
ENSDARG00000036778	hbs1l	100	71.902	ENSHGLG00000000516	HBS1L	100	71.037	Heterocephalus_glaber_female
ENSDARG00000036778	hbs1l	100	71.902	ENSHGLG00100003550	HBS1L	100	71.037	Heterocephalus_glaber_male
ENSDARG00000036778	hbs1l	100	76.074	ENSHCOG00000007581	hbs1l	93	75.931	Hippocampus_comes
ENSDARG00000036778	hbs1l	100	85.924	ENSIPUG00000010748	hbs1l	100	85.924	Ictalurus_punctatus
ENSDARG00000036778	hbs1l	100	72.190	ENSSTOG00000007551	HBS1L	100	71.614	Ictidomys_tridecemlineatus
ENSDARG00000036778	hbs1l	99	69.509	ENSJJAG00000017024	-	97	69.075	Jaculus_jaculus
ENSDARG00000036778	hbs1l	100	57.389	ENSJJAG00000012660	-	100	56.815	Jaculus_jaculus
ENSDARG00000036778	hbs1l	100	80.484	ENSKMAG00000012130	hbs1l	100	84.727	Kryptolebias_marmoratus
ENSDARG00000036778	hbs1l	100	78.236	ENSLBEG00000002784	hbs1l	100	78.236	Labrus_bergylta
ENSDARG00000036778	hbs1l	72	78.776	ENSLACG00000004528	HBS1L	99	78.776	Latimeria_chalumnae
ENSDARG00000036778	hbs1l	100	75.000	ENSLOCG00000016221	hbs1l	100	74.579	Lepisosteus_oculatus
ENSDARG00000036778	hbs1l	100	70.647	ENSLAFG00000007835	HBS1L	100	69.784	Loxodonta_africana
ENSDARG00000036778	hbs1l	100	72.439	ENSMFAG00000003766	HBS1L	100	91.304	Macaca_fascicularis
ENSDARG00000036778	hbs1l	95	73.266	ENSMMUG00000004802	HBS1L	100	91.304	Macaca_mulatta
ENSDARG00000036778	hbs1l	100	72.439	ENSMNEG00000043942	HBS1L	100	91.304	Macaca_nemestrina
ENSDARG00000036778	hbs1l	99	71.593	ENSMLEG00000043218	HBS1L	97	91.304	Mandrillus_leucophaeus
ENSDARG00000036778	hbs1l	100	78.107	ENSMAMG00000016498	hbs1l	98	85.019	Mastacembelus_armatus
ENSDARG00000036778	hbs1l	100	79.256	ENSMZEG00005015575	hbs1l	100	79.256	Maylandia_zebra
ENSDARG00000036778	hbs1l	80	86.038	ENSMZEG00005024018	-	90	86.038	Maylandia_zebra
ENSDARG00000036778	hbs1l	100	70.685	ENSMGAG00000013065	HBS1L	99	70.306	Meleagris_gallopavo
ENSDARG00000036778	hbs1l	100	72.334	ENSMAUG00000001077	Hbs1l	100	71.614	Mesocricetus_auratus
ENSDARG00000036778	hbs1l	99	68.064	ENSMICG00000001533	-	99	68.064	Microcebus_murinus
ENSDARG00000036778	hbs1l	99	62.985	ENSMICG00000030043	-	96	81.183	Microcebus_murinus
ENSDARG00000036778	hbs1l	100	72.230	ENSMOCG00000023038	Hbs1l	100	71.511	Microtus_ochrogaster
ENSDARG00000036778	hbs1l	99	80.273	ENSMMOG00000015507	hbs1l	99	80.273	Mola_mola
ENSDARG00000036778	hbs1l	100	71.965	ENSMODG00000017499	HBS1L	100	71.387	Monodelphis_domestica
ENSDARG00000036778	hbs1l	100	79.887	ENSMALG00000010768	hbs1l	100	79.491	Monopterus_albus
ENSDARG00000036778	hbs1l	100	71.531	MGP_CAROLIEiJ_G0015162	Hbs1l	100	70.959	Mus_caroli
ENSDARG00000036778	hbs1l	100	72.023	ENSMUSG00000019977	Hbs1l	100	93.548	Mus_musculus
ENSDARG00000036778	hbs1l	100	71.655	MGP_PahariEiJ_G0023782	Hbs1l	100	71.079	Mus_pahari
ENSDARG00000036778	hbs1l	100	71.942	MGP_SPRETEiJ_G0015970	Hbs1l	100	71.367	Mus_spretus
ENSDARG00000036778	hbs1l	100	72.294	ENSMPUG00000014810	HBS1L	100	71.861	Mustela_putorius_furo
ENSDARG00000036778	hbs1l	100	71.758	ENSMLUG00000010618	HBS1L	100	71.037	Myotis_lucifugus
ENSDARG00000036778	hbs1l	100	72.086	ENSNGAG00000015184	Hbs1l	100	71.799	Nannospalax_galili
ENSDARG00000036778	hbs1l	100	79.256	ENSNBRG00000020095	hbs1l	100	84.559	Neolamprologus_brichardi
ENSDARG00000036778	hbs1l	100	71.326	ENSNLEG00000014721	HBS1L	97	91.304	Nomascus_leucogenys
ENSDARG00000036778	hbs1l	82	83.249	ENSMEUG00000003907	HBS1L	81	83.249	Notamacropus_eugenii
ENSDARG00000036778	hbs1l	76	80.992	ENSOPRG00000013595	HBS1L	70	84.783	Ochotona_princeps
ENSDARG00000036778	hbs1l	100	71.726	ENSODEG00000008959	HBS1L	100	71.196	Octodon_degus
ENSDARG00000036778	hbs1l	100	79.113	ENSONIG00000000460	hbs1l	100	78.521	Oreochromis_niloticus
ENSDARG00000036778	hbs1l	99	72.035	ENSOANG00000002684	-	99	71.449	Ornithorhynchus_anatinus
ENSDARG00000036778	hbs1l	100	67.775	ENSOCUG00000011619	HBS1L	99	68.801	Oryctolagus_cuniculus
ENSDARG00000036778	hbs1l	100	75.779	ENSORLG00000016559	hbs1l	100	75.779	Oryzias_latipes
ENSDARG00000036778	hbs1l	100	75.212	ENSORLG00020003827	hbs1l	100	75.071	Oryzias_latipes_hni
ENSDARG00000036778	hbs1l	100	75.921	ENSORLG00015023105	hbs1l	100	75.921	Oryzias_latipes_hsok
ENSDARG00000036778	hbs1l	100	76.170	ENSOMEG00000016715	hbs1l	100	76.028	Oryzias_melastigma
ENSDARG00000036778	hbs1l	100	72.439	ENSOGAG00000012604	HBS1L	100	71.717	Otolemur_garnettii
ENSDARG00000036778	hbs1l	99	72.832	ENSOARG00000014798	-	99	71.965	Ovis_aries
ENSDARG00000036778	hbs1l	100	72.478	ENSOARG00000005671	-	100	71.614	Ovis_aries
ENSDARG00000036778	hbs1l	100	72.294	ENSPPAG00000029900	HBS1L	97	91.304	Pan_paniscus
ENSDARG00000036778	hbs1l	100	72.727	ENSPPRG00000005285	HBS1L	95	91.304	Panthera_pardus
ENSDARG00000036778	hbs1l	100	72.872	ENSPTIG00000015803	HBS1L	95	91.304	Panthera_tigris_altaica
ENSDARG00000036778	hbs1l	100	72.294	ENSPTRG00000018630	HBS1L	97	91.304	Pan_troglodytes
ENSDARG00000036778	hbs1l	100	72.439	ENSPANG00000007075	HBS1L	97	91.304	Papio_anubis
ENSDARG00000036778	hbs1l	100	77.471	ENSPKIG00000023171	hbs1l	100	77.616	Paramormyrops_kingsleyae
ENSDARG00000036778	hbs1l	88	67.736	ENSPSIG00000016467	HBS1L	97	68.060	Pelodiscus_sinensis
ENSDARG00000036778	hbs1l	99	75.620	ENSPMGG00000018051	hbs1l	96	89.894	Periophthalmus_magnuspinnatus
ENSDARG00000036778	hbs1l	100	72.350	ENSPEMG00000014369	Hbs1l	100	71.490	Peromyscus_maniculatus_bairdii
ENSDARG00000036778	hbs1l	100	64.502	ENSPMAG00000002516	hbs1l	100	64.502	Petromyzon_marinus
ENSDARG00000036778	hbs1l	100	78.642	ENSPFOG00000021764	hbs1l	100	78.642	Poecilia_formosa
ENSDARG00000036778	hbs1l	100	79.007	ENSPLAG00000006193	hbs1l	100	79.007	Poecilia_latipinna
ENSDARG00000036778	hbs1l	100	78.723	ENSPMEG00000000925	hbs1l	100	78.723	Poecilia_mexicana
ENSDARG00000036778	hbs1l	100	78.298	ENSPREG00000011270	hbs1l	100	78.298	Poecilia_reticulata
ENSDARG00000036778	hbs1l	100	71.573	ENSPPYG00000017027	HBS1L	100	70.851	Pongo_abelii
ENSDARG00000036778	hbs1l	87	76.952	ENSPCAG00000007002	HBS1L	78	76.952	Procavia_capensis
ENSDARG00000036778	hbs1l	83	76.996	ENSPVAG00000015229	HBS1L	84	80.645	Pteropus_vampyrus
ENSDARG00000036778	hbs1l	100	79.113	ENSPNYG00000013360	hbs1l	100	79.113	Pundamilia_nyererei
ENSDARG00000036778	hbs1l	100	88.889	ENSPNAG00000026721	hbs1l	100	88.889	Pygocentrus_nattereri
ENSDARG00000036778	hbs1l	100	72.086	ENSRNOG00000014531	Hbs1l	100	71.511	Rattus_norvegicus
ENSDARG00000036778	hbs1l	100	72.294	ENSRBIG00000004484	HBS1L	95	91.304	Rhinopithecus_bieti
ENSDARG00000036778	hbs1l	100	72.150	ENSRROG00000026176	HBS1L	95	89.130	Rhinopithecus_roxellana
ENSDARG00000036778	hbs1l	71	36.401	YKR084C	-	79	36.401	Saccharomyces_cerevisiae
ENSDARG00000036778	hbs1l	100	64.985	ENSSBOG00000016930	-	98	78.191	Saimiri_boliviensis_boliviensis
ENSDARG00000036778	hbs1l	100	72.622	ENSSBOG00000019696	-	99	91.304	Saimiri_boliviensis_boliviensis
ENSDARG00000036778	hbs1l	100	73.055	ENSSHAG00000013509	HBS1L	100	72.334	Sarcophilus_harrisii
ENSDARG00000036778	hbs1l	99	78.855	ENSSFOG00015017544	hbs1l	96	79.001	Scleropages_formosus
ENSDARG00000036778	hbs1l	100	77.746	ENSSMAG00000010621	hbs1l	100	78.000	Scophthalmus_maximus
ENSDARG00000036778	hbs1l	100	80.057	ENSSDUG00000012974	hbs1l	100	79.774	Seriola_dumerili
ENSDARG00000036778	hbs1l	100	79.349	ENSSLDG00000004960	hbs1l	96	86.989	Seriola_lalandi_dorsalis
ENSDARG00000036778	hbs1l	100	71.833	ENSSARG00000006747	HBS1L	100	71.450	Sorex_araneus
ENSDARG00000036778	hbs1l	99	70.563	ENSSPUG00000012389	HBS1L	99	70.767	Sphenodon_punctatus
ENSDARG00000036778	hbs1l	97	72.481	ENSSSCG00000004169	HBS1L	100	71.008	Sus_scrofa
ENSDARG00000036778	hbs1l	99	71.098	ENSTGUG00000011507	HBS1L	99	71.098	Taeniopygia_guttata
ENSDARG00000036778	hbs1l	99	77.253	ENSTRUG00000016128	hbs1l	89	94.595	Takifugu_rubripes
ENSDARG00000036778	hbs1l	99	78.955	ENSTNIG00000016320	hbs1l	99	78.520	Tetraodon_nigroviridis
ENSDARG00000036778	hbs1l	100	66.811	ENSTBEG00000009950	HBS1L	100	66.811	Tupaia_belangeri
ENSDARG00000036778	hbs1l	99	71.861	ENSTTRG00000003715	HBS1L	99	71.140	Tursiops_truncatus
ENSDARG00000036778	hbs1l	100	72.727	ENSUAMG00000001064	HBS1L	100	72.006	Ursus_americanus
ENSDARG00000036778	hbs1l	85	89.189	ENSUMAG00000024395	HBS1L	100	89.189	Ursus_maritimus
ENSDARG00000036778	hbs1l	86	78.996	ENSVPAG00000006280	HBS1L	86	86.000	Vicugna_pacos
ENSDARG00000036778	hbs1l	100	72.150	ENSVVUG00000000295	HBS1L	100	71.429	Vulpes_vulpes
ENSDARG00000036778	hbs1l	100	71.717	ENSXETG00000003726	hbs1l	100	71.717	Xenopus_tropicalis
ENSDARG00000036778	hbs1l	99	80.261	ENSXCOG00000005323	hbs1l	100	80.261	Xiphophorus_couchianus
ENSDARG00000036778	hbs1l	100	79.462	ENSXMAG00000004359	hbs1l	100	79.462	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0006412	translation	21873635.	IBA	Process