EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000036844 (Gene tree)
Gene ID: 553550
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 34021 bases
Position: chr3:60761811-60795831
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000053481	tRNA_int_end_N2	PF12928.7	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000053482	-	1514	XM_021470729	ENSDARP00000053481	397 (aa)	XP_021326404	F1QIM0

Gene Model

Click here to download ENSDARG00000036844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000036844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000036844	tsen54	99	43.427	ENSG00000182173	TSEN54	100	66.667	Homo_sapiens
ENSDARG00000036844	tsen54	100	59.024	ENSAPOG00000009659	tsen54	99	58.780	Acanthochromis_polyacanthus
ENSDARG00000036844	tsen54	99	43.619	ENSAMEG00000009414	TSEN54	81	42.923	Ailuropoda_melanoleuca
ENSDARG00000036844	tsen54	100	60.000	ENSAOCG00000000152	tsen54	79	59.756	Amphiprion_ocellaris
ENSDARG00000036844	tsen54	100	59.024	ENSAPEG00000018931	tsen54	79	58.780	Amphiprion_percula
ENSDARG00000036844	tsen54	100	55.760	ENSATEG00000019860	tsen54	81	55.760	Anabas_testudineus
ENSDARG00000036844	tsen54	99	47.877	ENSAPLG00000009419	TSEN54	94	47.642	Anas_platyrhynchos
ENSDARG00000036844	tsen54	99	44.262	ENSACAG00000006714	TSEN54	81	43.427	Anolis_carolinensis
ENSDARG00000036844	tsen54	99	43.972	ENSANAG00000024061	TSEN54	80	44.601	Aotus_nancymaae
ENSDARG00000036844	tsen54	100	56.145	ENSACLG00000019800	tsen54	80	55.529	Astatotilapia_calliptera
ENSDARG00000036844	tsen54	100	64.390	ENSAMXG00000006546	tsen54	80	64.390	Astyanax_mexicanus
ENSDARG00000036844	tsen54	99	42.958	ENSBTAG00000000824	TSEN54	80	43.529	Bos_taurus
ENSDARG00000036844	tsen54	99	43.427	ENSCJAG00000014278	TSEN54	80	44.028	Callithrix_jacchus
ENSDARG00000036844	tsen54	99	43.692	ENSCAFG00000004798	TSEN54	81	43.692	Canis_familiaris
ENSDARG00000036844	tsen54	99	43.692	ENSCAFG00020000312	TSEN54	81	43.692	Canis_lupus_dingo
ENSDARG00000036844	tsen54	99	45.131	ENSCHIG00000019908	TSEN54	80	43.510	Capra_hircus
ENSDARG00000036844	tsen54	99	43.326	ENSTSYG00000037439	TSEN54	94	43.294	Carlito_syrichta
ENSDARG00000036844	tsen54	99	45.863	ENSCCAG00000036624	TSEN54	80	45.305	Cebus_capucinus
ENSDARG00000036844	tsen54	99	45.305	ENSCATG00000042877	TSEN54	80	44.208	Cercocebus_atys
ENSDARG00000036844	tsen54	99	45.024	ENSCLAG00000002924	TSEN54	80	44.313	Chinchilla_lanigera
ENSDARG00000036844	tsen54	99	44.131	ENSCSAG00000004809	TSEN54	80	44.393	Chlorocebus_sabaeus
ENSDARG00000036844	tsen54	100	47.344	ENSCPBG00000028071	TSEN54	82	47.113	Chrysemys_picta_bellii
ENSDARG00000036844	tsen54	99	44.601	ENSCANG00000028053	TSEN54	80	43.662	Colobus_angolensis_palliatus
ENSDARG00000036844	tsen54	99	43.839	ENSCGRG00001020029	Tsen54	80	43.839	Cricetulus_griseus_chok1gshd
ENSDARG00000036844	tsen54	99	43.839	ENSCGRG00000016289	Tsen54	95	43.839	Cricetulus_griseus_crigri
ENSDARG00000036844	tsen54	100	51.675	ENSCSEG00000020586	tsen54	99	50.483	Cynoglossus_semilaevis
ENSDARG00000036844	tsen54	80	70.455	ENSDNOG00000018452	TSEN54	81	44.186	Dasypus_novemcinctus
ENSDARG00000036844	tsen54	99	45.154	ENSDORG00000004073	Tsen54	80	44.208	Dipodomys_ordii
ENSDARG00000036844	tsen54	99	44.965	ENSEASG00005000579	TSEN54	81	44.262	Equus_asinus_asinus
ENSDARG00000036844	tsen54	99	44.496	ENSECAG00000004924	TSEN54	81	43.794	Equus_caballus
ENSDARG00000036844	tsen54	99	41.763	ENSEEUG00000008467	TSEN54	94	43.619	Erinaceus_europaeus
ENSDARG00000036844	tsen54	99	54.670	ENSELUG00000017703	tsen54	75	54.670	Esox_lucius
ENSDARG00000036844	tsen54	99	43.224	ENSFCAG00000023712	TSEN54	81	43.224	Felis_catus
ENSDARG00000036844	tsen54	99	47.541	ENSFALG00000001119	TSEN54	80	46.244	Ficedula_albicollis
ENSDARG00000036844	tsen54	99	45.626	ENSFDAG00000019090	TSEN54	93	43.839	Fukomys_damarensis
ENSDARG00000036844	tsen54	100	58.293	ENSFHEG00000005470	tsen54	80	58.049	Fundulus_heteroclitus
ENSDARG00000036844	tsen54	99	44.862	ENSGMOG00000013146	tsen54	83	43.719	Gadus_morhua
ENSDARG00000036844	tsen54	99	43.590	ENSGALG00000047163	TSEN54	84	43.357	Gallus_gallus
ENSDARG00000036844	tsen54	100	56.436	ENSGAFG00000005111	tsen54	80	55.941	Gambusia_affinis
ENSDARG00000036844	tsen54	100	52.956	ENSGACG00000014987	tsen54	82	52.709	Gasterosteus_aculeatus
ENSDARG00000036844	tsen54	100	47.454	ENSGAGG00000006825	TSEN54	80	46.296	Gopherus_agassizii
ENSDARG00000036844	tsen54	99	43.662	ENSGGOG00000009417	TSEN54	83	44.000	Gorilla_gorilla
ENSDARG00000036844	tsen54	95	52.417	ENSHBUG00000018296	tsen54	98	52.284	Haplochromis_burtoni
ENSDARG00000036844	tsen54	99	45.498	ENSHGLG00000007979	TSEN54	80	45.498	Heterocephalus_glaber_female
ENSDARG00000036844	tsen54	99	45.498	ENSHGLG00100005497	TSEN54	80	45.498	Heterocephalus_glaber_male
ENSDARG00000036844	tsen54	100	56.618	ENSHCOG00000007481	tsen54	99	55.746	Hippocampus_comes
ENSDARG00000036844	tsen54	100	52.392	ENSIPUG00000000590	tsen54	80	54.146	Ictalurus_punctatus
ENSDARG00000036844	tsen54	99	43.839	ENSSTOG00000012883	TSEN54	80	42.891	Ictidomys_tridecemlineatus
ENSDARG00000036844	tsen54	99	45.775	ENSJJAG00000007365	Tsen54	80	45.070	Jaculus_jaculus
ENSDARG00000036844	tsen54	100	55.220	ENSKMAG00000006944	tsen54	81	54.398	Kryptolebias_marmoratus
ENSDARG00000036844	tsen54	100	54.695	ENSLBEG00000004199	tsen54	81	53.756	Labrus_bergylta
ENSDARG00000036844	tsen54	100	40.690	ENSLACG00000009497	TSEN54	83	40.000	Latimeria_chalumnae
ENSDARG00000036844	tsen54	100	54.779	ENSLOCG00000011191	tsen54	81	53.846	Lepisosteus_oculatus
ENSDARG00000036844	tsen54	99	43.160	ENSLAFG00000011655	TSEN54	80	42.453	Loxodonta_africana
ENSDARG00000036844	tsen54	99	43.897	ENSMFAG00000000712	TSEN54	80	44.159	Macaca_fascicularis
ENSDARG00000036844	tsen54	99	44.366	ENSMNEG00000029199	TSEN54	80	44.159	Macaca_nemestrina
ENSDARG00000036844	tsen54	99	43.662	ENSMLEG00000044168	TSEN54	82	43.925	Mandrillus_leucophaeus
ENSDARG00000036844	tsen54	100	58.273	ENSMAMG00000019773	tsen54	80	57.794	Mastacembelus_armatus
ENSDARG00000036844	tsen54	100	55.663	ENSMZEG00005000884	tsen54	80	55.048	Maylandia_zebra
ENSDARG00000036844	tsen54	99	43.823	ENSMGAG00000009556	TSEN54	81	44.755	Meleagris_gallopavo
ENSDARG00000036844	tsen54	99	43.365	ENSMAUG00000016838	Tsen54	80	42.217	Mesocricetus_auratus
ENSDARG00000036844	tsen54	99	46.324	ENSMICG00000044012	TSEN54	80	46.210	Microcebus_murinus
ENSDARG00000036844	tsen54	99	43.160	ENSMOCG00000021585	Tsen54	80	43.160	Microtus_ochrogaster
ENSDARG00000036844	tsen54	100	50.864	ENSMMOG00000020189	tsen54	81	51.605	Mola_mola
ENSDARG00000036844	tsen54	99	42.661	ENSMODG00000007438	TSEN54	79	42.661	Monodelphis_domestica
ENSDARG00000036844	tsen54	100	56.635	ENSMALG00000020573	tsen54	81	55.556	Monopterus_albus
ENSDARG00000036844	tsen54	99	44.550	MGP_CAROLIEiJ_G0017417	Tsen54	80	42.824	Mus_caroli
ENSDARG00000036844	tsen54	99	44.444	ENSMUSG00000020781	Tsen54	80	42.553	Mus_musculus
ENSDARG00000036844	tsen54	99	43.499	MGP_PahariEiJ_G0018547	Tsen54	80	42.317	Mus_pahari
ENSDARG00000036844	tsen54	99	44.316	MGP_SPRETEiJ_G0018262	Tsen54	80	42.958	Mus_spretus
ENSDARG00000036844	tsen54	99	42.523	ENSMPUG00000013870	TSEN54	81	42.523	Mustela_putorius_furo
ENSDARG00000036844	tsen54	99	44.310	ENSMLUG00000015298	TSEN54	81	45.122	Myotis_lucifugus
ENSDARG00000036844	tsen54	99	45.192	ENSNGAG00000015673	Tsen54	80	45.192	Nannospalax_galili
ENSDARG00000036844	tsen54	99	40.471	ENSMEUG00000011908	TSEN54	91	40.094	Notamacropus_eugenii
ENSDARG00000036844	tsen54	99	42.233	ENSOPRG00000012513	TSEN54	80	42.233	Ochotona_princeps
ENSDARG00000036844	tsen54	100	56.115	ENSONIG00000009543	tsen54	81	55.635	Oreochromis_niloticus
ENSDARG00000036844	tsen54	99	43.059	ENSOCUG00000009875	TSEN54	78	42.824	Oryctolagus_cuniculus
ENSDARG00000036844	tsen54	99	53.250	ENSORLG00000000852	tsen54	80	52.250	Oryzias_latipes
ENSDARG00000036844	tsen54	99	53.865	ENSORLG00020018221	tsen54	89	52.750	Oryzias_latipes_hni
ENSDARG00000036844	tsen54	99	53.500	ENSORLG00015009413	tsen54	81	52.750	Oryzias_latipes_hsok
ENSDARG00000036844	tsen54	100	55.362	ENSOMEG00000014402	tsen54	78	54.364	Oryzias_melastigma
ENSDARG00000036844	tsen54	99	42.891	ENSOGAG00000001442	TSEN54	80	42.143	Otolemur_garnettii
ENSDARG00000036844	tsen54	99	42.723	ENSOARG00000010361	TSEN54	94	43.765	Ovis_aries
ENSDARG00000036844	tsen54	99	43.765	ENSPPAG00000043519	TSEN54	85	44.941	Pan_paniscus
ENSDARG00000036844	tsen54	99	43.692	ENSPPRG00000009162	TSEN54	81	43.692	Panthera_pardus
ENSDARG00000036844	tsen54	99	43.602	ENSPTIG00000019312	TSEN54	90	44.104	Panthera_tigris_altaica
ENSDARG00000036844	tsen54	99	43.662	ENSPTRG00000009646	TSEN54	80	44.000	Pan_troglodytes
ENSDARG00000036844	tsen54	99	44.208	ENSPANG00000020133	TSEN54	80	44.028	Papio_anubis
ENSDARG00000036844	tsen54	99	57.767	ENSPKIG00000023018	tsen54	99	58.495	Paramormyrops_kingsleyae
ENSDARG00000036844	tsen54	100	46.028	ENSPSIG00000012807	TSEN54	100	45.794	Pelodiscus_sinensis
ENSDARG00000036844	tsen54	100	40.050	ENSPMGG00000019578	tsen54	85	39.552	Periophthalmus_magnuspinnatus
ENSDARG00000036844	tsen54	99	44.418	ENSPEMG00000014857	Tsen54	80	42.217	Peromyscus_maniculatus_bairdii
ENSDARG00000036844	tsen54	100	58.333	ENSPFOG00000022740	tsen54	80	57.740	Poecilia_formosa
ENSDARG00000036844	tsen54	100	58.416	ENSPLAG00000014847	tsen54	80	57.816	Poecilia_latipinna
ENSDARG00000036844	tsen54	100	57.921	ENSPMEG00000022876	tsen54	80	57.320	Poecilia_mexicana
ENSDARG00000036844	tsen54	100	58.911	ENSPREG00000013090	tsen54	80	58.313	Poecilia_reticulata
ENSDARG00000036844	tsen54	99	46.500	ENSPPYG00000008629	TSEN54	87	45.500	Pongo_abelii
ENSDARG00000036844	tsen54	72	69.444	ENSPCAG00000002093	TSEN54	55	69.444	Procavia_capensis
ENSDARG00000036844	tsen54	99	43.972	ENSPCOG00000027880	TSEN54	81	44.208	Propithecus_coquereli
ENSDARG00000036844	tsen54	99	43.458	ENSPVAG00000008446	TSEN54	81	43.721	Pteropus_vampyrus
ENSDARG00000036844	tsen54	100	55.961	ENSPNYG00000010217	tsen54	99	55.825	Pundamilia_nyererei
ENSDARG00000036844	tsen54	100	63.183	ENSPNAG00000003770	tsen54	81	63.183	Pygocentrus_nattereri
ENSDARG00000036844	tsen54	99	44.471	ENSRNOG00000004598	Tsen54	80	43.529	Rattus_norvegicus
ENSDARG00000036844	tsen54	99	44.836	ENSRBIG00000043040	TSEN54	80	43.735	Rhinopithecus_bieti
ENSDARG00000036844	tsen54	99	44.836	ENSRROG00000030797	TSEN54	80	43.735	Rhinopithecus_roxellana
ENSDARG00000036844	tsen54	99	40.898	ENSSBOG00000013543	TSEN54	79	42.015	Saimiri_boliviensis_boliviensis
ENSDARG00000036844	tsen54	99	44.138	ENSSHAG00000018127	TSEN54	80	43.448	Sarcophilus_harrisii
ENSDARG00000036844	tsen54	99	56.835	ENSSFOG00015004093	tsen54	99	57.074	Scleropages_formosus
ENSDARG00000036844	tsen54	100	55.738	ENSSMAG00000012449	tsen54	97	55.634	Scophthalmus_maximus
ENSDARG00000036844	tsen54	100	59.294	ENSSDUG00000021506	tsen54	81	59.059	Seriola_dumerili
ENSDARG00000036844	tsen54	100	59.294	ENSSLDG00000016303	tsen54	81	59.059	Seriola_lalandi_dorsalis
ENSDARG00000036844	tsen54	78	42.105	ENSSPUG00000008988	TSEN54	76	40.176	Sphenodon_punctatus
ENSDARG00000036844	tsen54	100	59.024	ENSSPAG00000008098	-	99	55.721	Stegastes_partitus
ENSDARG00000036844	tsen54	100	55.970	ENSSPAG00000008047	tsen54	99	55.721	Stegastes_partitus
ENSDARG00000036844	tsen54	99	44.601	ENSSSCG00000036852	TSEN54	90	44.601	Sus_scrofa
ENSDARG00000036844	tsen54	99	47.086	ENSTGUG00000008548	TSEN54	94	45.863	Taeniopygia_guttata
ENSDARG00000036844	tsen54	100	55.388	ENSTRUG00000004230	tsen54	80	55.639	Takifugu_rubripes
ENSDARG00000036844	tsen54	100	54.369	ENSTNIG00000011281	tsen54	81	54.126	Tetraodon_nigroviridis
ENSDARG00000036844	tsen54	99	44.056	ENSTTRG00000015828	TSEN54	94	43.823	Tursiops_truncatus
ENSDARG00000036844	tsen54	99	44.159	ENSUAMG00000010045	TSEN54	99	43.925	Ursus_americanus
ENSDARG00000036844	tsen54	99	43.953	ENSUMAG00000008979	TSEN54	99	43.925	Ursus_maritimus
ENSDARG00000036844	tsen54	99	43.925	ENSVVUG00000011411	TSEN54	82	43.925	Vulpes_vulpes
ENSDARG00000036844	tsen54	100	44.153	ENSXETG00000012532	tsen54	63	65.714	Xenopus_tropicalis
ENSDARG00000036844	tsen54	100	55.635	ENSXCOG00000018245	tsen54	99	55.396	Xiphophorus_couchianus
ENSDARG00000036844	tsen54	100	56.965	ENSXMAG00000018818	tsen54	80	56.716	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005230	extracellular ligand-gated ion channel activity	21873635.	IBA	Function
GO:0005887	integral component of plasma membrane	21873635.	IBA	Component
GO:0007165	signal transduction	21873635.	IBA	Process
GO:0007268	chemical synaptic transmission	21873635.	IBA	Process
GO:0034220	ion transmembrane transport	21873635.	IBA	Process
GO:0042391	regulation of membrane potential	21873635.	IBA	Process
GO:0043005	neuron projection	21873635.	IBA	Component
GO:0045202	synapse	21873635.	IBA	Component
GO:0048854	brain morphogenesis	21273289.	IMP	Process
GO:0050877	nervous system process	21873635.	IBA	Process